Molecular Ecology

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  Publication Venue For

  • The challenge and promise of estimating the de novo mutation rate from whole-genome comparisons among closely related individuals. 2021
  • Ocean acidification induces distinct transcriptomic responses across life history stages of the sea urchin Heliocidaris erythrogramma..  29:4618-4636. 2020
  • Fungal heavy metal adaptation through single nucleotide polymorphisms and copy-number variation..  29:4157-4169. 2020
  • Gene flow, divergent selection and resistance to introgression in two species of morning glories (Ipomoea)..  28:1709-1729. 2019
  • Dissecting the role of a large chromosomal inversion in life history divergence throughout the Mimulus guttatus species complex..  28:1343-1357. 2019
  • Multi-tasking as an ancient skill: When one gene does many things well..  28:917-919. 2019
  • Pervasive gene conversion in chromosomal inversion heterozygotes..  28:1302-1315. 2019
  • Major QTL controls adaptation to serpentine soils in Mimulus guttatus..  27:5073-5087. 2018
  • Comparing methods for detecting multilocus adaptation with multivariate genotype-environment associations..  27:2215-2233. 2018
  • The ecosystem services of animal microbiomes..  27:2164-2172. 2018
  • Pervasive migration across rainforest and sandy coastal plain Aechmea nudicaulis (Bromeliaceae) populations despite contrasting environmental conditions..  27:1261-1272. 2018
  • Transcriptomics in the wild: Hibernation physiology in free-ranging dwarf lemurs..  27:709-722. 2018
  • Complex selection on a regulator of social cognition: Evidence of balancing selection, regulatory interactions and population differentiation in the prairie vole Avpr1a locus..  27:419-431. 2018
  • Continental-level population differentiation and environmental adaptation in the mushroom Suillus brevipes..  26:2063-2076. 2017
  • The quick and the dead: microbial demography at the yeast thermal limit..  26:1631-1640. 2017
  • Gene conversion and linkage: effects on genome evolution and speciation..  26:351-364. 2017
  • Population structure and local selection yield high genomic variation in Mimulus guttatus..  26:519-535. 2017
  • The genetic architecture of local adaptation and reproductive isolation in sympatry within the Mimulus guttatus species complex..  26:208-224. 2017
  • Genomewide ancestry and divergence patterns from low-coverage sequencing data reveal a complex history of admixture in wild baboons..  25:3469-3483. 2016
  • Species discovery and validation in a cryptic radiation of endangered primates: coalescent-based species delimitation in Madagascar's mouse lemurs..  25:2029-2045. 2016
  • Resource base influences genome-wide DNA methylation levels in wild baboons (Papio cynocephalus)..  25:1681-1696. 2016
  • Sex-specific fitness effects of unpredictable early life conditions are associated with DNA methylation in the avian glucocorticoid receptor..  25:1714-1728. 2016
  • Genomewide investigation of adaptation to harmful algal blooms in common bottlenose dolphins (Tursiops truncatus)..  24:4697-4710. 2015
  • Phylogeny and biogeography of the American live oaks (Quercus subsection Virentes): a genomic and population genetics approach..  24:3668-3687. 2015
  • Genetic isolation between two recently diverged populations of a symbiotic fungus..  24:2747-2758. 2015
  • Recipient of the 2014 molecular ecology prize: Johanna Schmitt..  24:18-21. 2015
  • The extent and genetic basis of phenotypic divergence in life history traits in Mimulus guttatus..  24:111-122. 2015
  • The socio-genetics of a complex society: female gelada relatedness patterns mirror association patterns in a multilevel society..  23:6179-6191. 2014
  • Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants..  23:3356-3370. 2014
  • Divergent population structure and climate associations of a chromosomal inversion polymorphism across the Mimulus guttatus species complex..  23:2844-2860. 2014
  • Human disturbance causes the formation of a hybrid swarm between two naturally sympatric fish species..  23:1137-1152. 2014
  • Novel statistical methods for integrating genetic and stable isotope data to infer individual-level migratory connectivity.  22:4163-4176. 2013
  • Selection on QTL and complex traits in complex environments..  22:3427-3429. 2013
  • Complex trait divergence contributes to environmental niche differentiation in ecological speciation of Boechera stricta..  22:2204-2217. 2013
  • High diversity and widespread occurrence of mitotic spore mats in ectomycorrhizal Pezizales..  22:1717-1732. 2013
  • Genetic trade-offs and conditional neutrality contribute to local adaptation..  22:699-708. 2013
  • Allotetraploid Mimulus sookensis are highly interfertile despite independent origins..  21:5280-5298. 2012
  • Long-distance dispersal and genetic structure of natural populations: an assessment of the inverse isolation hypothesis in peat mosses..  21:5461-5472. 2012
  • Genetics of gene expression responses to temperature stress in a sea urchin gene network..  21:4547-4562. 2012
  • Defining spatial and temporal patterns of phylogeographic structure in Madagascar's iguanid lizards (genus Oplurus)..  21:3839-3851. 2012
  • Spatially and temporally varying selection on intrapopulation quantitative trait loci for a life history trade-off in Mimulus guttatus..  21:3718-3728. 2012
  • Getting under—and through—the skin: ecological genomics of chytridiomycosis infection in frogs..  21:3095-3097. 2012
  • Genome-wide architecture of reproductive isolation in a naturally occurring hybrid zone between Mus musculus musculus and M. m. domesticus..  21:3032-3047. 2012
  • Genetic structure in a dynamic baboon hybrid zone corroborates behavioural observations in a hybrid population..  21:715-731. 2012
  • Boechera, a model system for ecological genomics..  20:4843-4857. 2011
  • Quantifying effects of environmental and geographical factors on patterns of genetic differentiation..  20:4631-4642. 2011
  • DOG1 expression is predicted by the seed-maturation environment and contributes to geographical variation in germination in Arabidopsis thaliana..  20:3336-3349. 2011
  • Interploidal hybridization and mating patterns in the Sphagnum subsecundum complex..  20:3202-3218. 2011
  • Comparative genomics based on massive paralle transcriptome sequencing reveals patterns of substitution and selection across 10 bird species (Molecular Ecology (2010) 19:SUPPL.1 (266-276)).  20:2871. 2011
  • Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone..  20:2985-3000. 2011
  • Estimating seed and pollen movement in a monoecious plant: a hierarchical Bayesian approach integrating genetic and ecological data..  20:1248-1262. 2011
  • Allele-specific gene expression in a wild nonhuman primate population..  20:725-739. 2011
  • One haploid parent contributes 100% of the gene pool for a widespread species in northwest North America..  20:753-767. 2011
  • A global meta-analysis of Tuber ITS rDNA sequences: species diversity, host associations and long-distance dispersal..  19:4994-5008. 2010
  • Population history in Arabidopsis halleri using multilocus analysis..  19:3364-3379. 2010
  • Is local adaptation in Mimulus guttatus caused by trade-offs at individual loci?.  19:2739-2753. 2010
  • The earliest stages of adaptation in an experimental plant population: strong selection on QTLS for seed dormancy..  19:1335-1351. 2010
  • Three-genome mosses: complex double allopolyploid origins for triploid gametophytes in Sphagnum..  18:1439-1454. 2009
  • History and evolution of alpine plants endemic to the Qinghai-Tibetan Plateau: Aconitum gymnandrum (Ranunculaceae)..  18:709-721. 2009
  • Recent divergence, intercontinental dispersal and shared polymorphism are shaping the genetic structure of amphi-Atlantic peatmoss populations..  17:5364-5377. 2008
  • Smelling right: the scent of male lemurs advertises genetic quality and relatedness..  17:3225-3233. 2008
  • Fine-scale population genetic structure in a fission-fusion society..  17:2666-2679. 2008
  • Age at maturity in wild baboons: genetic, environmental and demographic influences..  17:2026-2040. 2008
  • Genetic evidence reveals temporal change in hybridization patterns in a wild baboon population..  17:1998-2011. 2008
  • Patterns of nucleotide variation and reproductive isolation between a Mimulus allotetraploid and its progenitor species..  17:2089-2100. 2008
  • Behavioural inbreeding avoidance in wild African elephants..  16:4138-4148. 2007
  • High genetic diversity and population differentiation in Boechera fecunda, a rare relative of Arabidopsis..  16:4079-4088. 2007
  • Hybridization in postglacial marine habitats..  16:3971-3972. 2007
  • Hawksbill sea turtles: can phylogenetics inform harvesting?.  16:3511-3513. 2007
  • Working at the interface of phylogenetics and population genetics: a biogeographical analysis of Triaenops spp. (Chiroptera: Hipposideridae)..  16:839-851. 2007
  • Local-scale genetic structure in the peatmoss Sphagnum fuscum..  16:305-312. 2007
  • Comparative phylogeography of unglaciated eastern North America..  15:4261-4293. 2006
  • Nearshore fish (Pholis gunnellus) persists across the North Atlantic through multiple glacial episodes..  15:4095-4107. 2006
  • Population genetic structure of Arabidopsis lyrata in Europe..  15:2753-2766. 2006
  • Experimental habitat fragmentation increases linkage disequilibrium but does not affect genetic diversity or population structure in the Amazonian liverwort Radula flaccida..  15:2305-2315. 2006
  • Expression profiling and local adaptation of Boechera holboellii populations for water use efficiency across a naturally occurring water stress gradient..  15:1229-1237. 2006
  • Preface to the special issue: ecological and evolutionary genomics of populations in nature..  15:1193-1196. 2006
  • Geographic patterns of microsatellite variation in Boechera stricta, a close relative of Arabidopsis..  15:357-369. 2006
  • Selective sweeps and intercontinental migration in the cosmopolitan moss Ceratodon purpureus (Hedw.) Brid..  14:1121-1132. 2005
  • Local adaptation and species segregation in two mussel (Mytilus edulis x Mytilus trossulus) hybrid zones..  14:381-400. 2005
  • Nucleotide variation at the myrosinase-encoding locus, TGG1, and quantitative myrosinase enzyme activity variation in Arabidopsis thaliana..  14:295-309. 2005
  • Strong fungal specificity and selectivity for algal symbionts in Florida scrub Cladonia lichens..  13:3367-3378. 2004
  • Effects of variation at the flower-colour A locus on mating system parameters in Ipomoea purpurea..  13:1839-1847. 2004
  • Divergence dates for Malagasy lemurs estimated from multiple gene loci: geological and evolutionary context..  13:757-773. 2004
  • Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. x divaricarpa, and A. holboellii (Brassicaceae)..  13:349-370. 2004
  • Global patterns in peatmoss biodiversity..  12:2553-2570. 2003
  • Analysis of a chalcone synthase mutant in Ipomoea purpurea reveals a novel function for flavonoids: amelioration of heat stress..  12:1113-1124. 2003
  • Genetics of drought adaptation in Arabidopsis thaliana: I. Pleiotropy contributes to genetic correlations among ecological traits..  12:1137-1151. 2003
  • Population genetics of tandem trypsin inhibitor genes in Arabidopsis species with contrasting ecology and life history..  12:1287-1299. 2003
  • The evolution of conspecific sperm precedence in Drosophila..  12:1179-1184. 2003
  • Multilocus sequence typing suggests the chytrid pathogen of amphibians is a recently emerged clone..  12:395-403. 2003
  • Cross-species microsatellite markers for elucidating population genetic structure in Arabidopsis and Arabis (Brassicaeae)..  11:591-601. 2002
  • Noninvasive paternity assignment in Gombe chimpanzees..  10:1279-1300. 2001
  • Abundance and diversity of Schizophyllum commune spore clouds in the Caribbean detected by selective sampling..  10:471-479. 2001
  • Genetic isolation by distance in Arabidopsis thaliana: biogeography and postglacial colonization of Europe..  9:2109-2118. 2000
  • Multiple gene genealogies reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans..  9:1471-1481. 2000
  • Molecular phylogeography and cryptic speciation in the mosses, Mielichhoferia elongata and M. mielichhoferiana (Bryaceae)..  9:595-608. 2000
  • Genetic variation within and among populations of the threatened lichen Lobaria pulmonaria in Switzerland and implications for its conservation..  8:2049-2059. 1999
  • PCR-restriction fragment length polymorphism (RFLP) analyses reveal both extensive clonality and local genetic differences in Candida albicans..  8:59-73. 1999
  • Polymorphic microsatellite loci in Mimulus guttatus and related species.  7:769-774. 1998
  • Studying and managing the risk of cross‐fertilization between transgenic crops and wild relatives.  3:15-21. 1994