Genome Biology
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Publication Venue For
- Author Correction: Highly recurrent CBS epimutations in gastric cancer CpG island methylator phenotypes and inflammation.. 22:181. 2021
- Complete vertebrate mitogenomes reveal widespread repeats and gene duplications.. 22:120. 2021
- A statistical and biological response to an informatics appraisal of healthy aging gene signatures.. 20:152. 2019
- Correction to: DNA copy number evolution in Drosophila cell lines.. 20:53. 2019
- BayFish: Bayesian inference of transcription dynamics from population snapshots of single-molecule RNA FISH in single cells.. 18:164. 2017
- MATCHER: manifold alignment reveals correspondence between single cell transcriptome and epigenome dynamics.. 18:138. 2017
- Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types.. 18:18. 2017
- Erratum to: Host lifestyle affects human microbiota on daily timescales.. 17:117. 2016
- SLICER: inferring branched, nonlinear cellular trajectories from single cell RNA-seq data.. 17:106. 2016
- Application of single-cell RNA sequencing in optimizing a combinatorial therapeutic strategy in metastatic renal cell carcinoma.. 17:80. 2016
- Epigenetic assimilation in the aging human brain.. 17:76. 2016
- The intolerance to functional genetic variation of protein domains predicts the localization of pathogenic mutations within genes.. 17:9. 2016
- Expanding the diversity of DNA base modifications with N⁶-methyldeoxyadenosine.. 17:5. 2016
- Characterization of Staphylococcus aureus Cas9: a smaller Cas9 for all-in-one adeno-associated virus delivery and paired nickase applications.. 16:257. 2015
- CPAG: software for leveraging pleiotropy in GWAS to reveal similarity between human traits links plasma fatty acids and intestinal inflammation.. 16:190. 2015
- A novel multi-tissue RNA diagnostic of healthy ageing relates to cognitive health status.. 16:185. 2015
- High-depth sequencing of over 750 genes supports linear progression of primary tumors and metastases in most patients with liver-limited metastatic colorectal cancer.. 16:32. 2015
- Avianbase: a community resource for bird genomics.. 16:21. 2015
- DNA copy number evolution in Drosophila cell lines.. 15:R70. 2014
- An RNA tertiary switch by modifying how helices are tethered.. 15:425. 2014
- Advancing the functional utility of PAR-CLIP by quantifying background binding to mRNAs and lncRNAs.. 15:R2. 2014
- Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition.. 15:549. 2014
- Genomic signatures of near-extinction and rebirth of the crested ibis and other endangered bird species.. 15:557. 2014
- Host lifestyle affects human microbiota on daily timescales.. 15:R89. 2014
- Low frequency of paleoviral infiltration across the avian phylogeny.. 15:539. 2014
- Sequence specificity incompletely defines the genome-wide occupancy of Myc.. 15:482. 2014
- Sustained-input switches for transcription factors and microRNAs are central building blocks of eukaryotic gene circuits.. 14:R85. 2013
- The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage.. 14:R28. 2013
- Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape.. 14:R102. 2013
- The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage. 14. 2013
- Whole-genome reconstruction and mutational signatures in gastric cancer.. 13:R115. 2012
- The birth of the Epitranscriptome: deciphering the function of RNA modifications.. 13:175. 2012
- Chromatin accessibility reveals insights into androgen receptor activation and transcriptional specificity.. 13:R88. 2012
- An encyclopedia of mouse DNA elements (Mouse ENCODE).. 13:418. 2012
- Dissecting the regulatory architecture of gene expression QTLs.. 13:R7. 2012
- Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes.. 13:415. 2012
- Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights.. 12:R125. 2011
- First somatic mutation of E2F1 in a critical DNA binding residue discovered in well-differentiated papillary mesothelioma of the peritoneum.. 12:R96. 2011
- PARalyzer: definition of RNA binding sites from PAR-CLIP short-read sequence data.. 12:R79. 2011
- Comparative and functional genomics provide insights into the pathogenicity of dermatophytic fungi.. 12:R7. 2011
- Evidence-ranked motif identification.. 11:R19. 2010
- Mapping the complexity of transcription control in higher eukaryotes.. 11:115. 2010
- Screening the human exome: a comparison of whole genome and whole transcriptome sequencing.. 11:R57. 2010
- Unmasking a role for sex chromosomes in gene silencing.. 11:134. 2010
- Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome.. 10:R73. 2009
- Comparative hybridization reveals extensive genome variation in the AIDS-associated pathogen Cryptococcus neoformans.. 9:R41. 2008
- Singular value decomposition-based regression identifies activation of endogenous signaling pathways in vivo.. 9:R180. 2008
- A case study of the reproducibility of transcriptional reporter cell-based RNAi screens in Drosophila.. 8:R203. 2007
- Alternative ion channel splicing in mesial temporal lobe epilepsy and Alzheimer's disease.. 8:R32. 2007
- Comparative genomic analysis of fungal genomes reveals intron-rich ancestors.. 8:R223. 2007
- Deciphering the molecular machinery of stem cells: a look at the neoblast gene expression profile.. 8:R62. 2007
- Phylogenetic simulation of promoter evolution: estimation and modeling of binding site turnover events and assessment of their impact on alignment tools.. 8:R225. 2007
- Sequential gene profiling of basal cell carcinomas treated with imiquimod in a placebo-controlled study defines the requirements for tissue rejection.. 8:R8. 2007
- Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.. 7 Suppl 1:S3.1-S313. 2006
- Prospective health care: the second transformation of medicine.. 7:104. 2006
- Explicit equilibrium modeling of transcription-factor binding and gene regulation.. 6:R87. 2005
- Identification of co-regulated transcripts affecting male body size in Drosophila.. 6:R53. 2005
- Polarized monocyte response to cytokine stimulation.. 6:R15. 2005
- The cyclophilins.. 6:226. 2005
- Estimating genomic coexpression networks using first-order conditional independence.. 5:R100. 2004
- Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii.. 4:R45. 2003
- Taste and pheromone perception in mammals and flies.. 4:220. 2003
- Gene-expression profiling of the response of peripheral blood mononuclear cells and melanoma metastases to systemic IL-2 administration.. 3:RESEARCH0035. 2002
- Computational analysis of core promoters in the Drosophila genome.. 3:RESEARCH0087. 2002
- Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.. 3:RESEARCH0085. 2002
- Identification and utilization of arbitrary correlations in models of recombination signal sequences.. 3:RESEARCH0072. 2002