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Subject Areas on Research
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A High-Throughput Organoid Microinjection Platform to Study Gastrointestinal Microbiota and Luminal Physiology.
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A coprological survey of parasites of wild mantled howling monkeys, Alouatta palliata palliata.
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A hands-free stool sampling system for monitoring intestinal health and disease.
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A look at the stool can save a barium study.
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A mathematical model to evaluate the routine use of fecal microbiota transplantation to prevent incident and recurrent Clostridium difficile infection.
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A role for gut microbiota in host niche differentiation.
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AIDS-associated diarrhea and wasting in Northeast Brazil is associated with subtherapeutic plasma levels of antiretroviral medications and with both bovine and human subtypes of Cryptosporidium parvum.
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Acquisition of Clostridium difficile from the hospital environment.
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Adenoviral-mediated gene transfer induces sustained pericardial VEGF expression in dogs: effect on myocardial angiogenesis.
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Adjuvant Injections Altered the Ileal and Fecal Microbiota Differently with Changes in Immunoglobulin Isotypes and Antimycobacterial Antibody Responses.
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African strains of hepatitis E virus that are distinct from Asian strains.
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Altering and assessing persistence of genetically modified E. coli MG1655 in the large bowel.
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Amebiasis in a mental institution: serologic and epidemiologic studies.
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Amplification of a complete simian immunodeficiency virus genome from fecal RNA of a wild chimpanzee.
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An assessment of fecal indicator bacteria-based water quality standards.
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An intergenerational androgenic mechanism of female intrasexual competition in the cooperatively breeding meerkat.
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Analysis of enteric coagulase-negative staphylococci from neonates with necrotizing enterocolitis.
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Androgens predict parasitism in female meerkats: a new perspective on a classic trade-off.
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Antibiotic-induced changes in the microbiota disrupt redox dynamics in the gut.
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Antimicrobial susceptibility pattern of Shigella spp. isolated from children under 5 years of age attending tertiary care hospitals, Nepal along with first finding of ESBL-production.
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Application of rejection criteria for stool cultures for bacterial enteric pathogens.
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Application of rejection criteria for stool ovum and parasite examinations.
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Assessment and significance of bacterial overgrowth in the small bowel.
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Assessment of Clostridium difficile-associated disease surveillance definitions, North Carolina, 2005.
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Association Between Breast Milk Bacterial Communities and Establishment and Development of the Infant Gut Microbiome.
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Association of birth mode of delivery with infant faecal microbiota, potential pathobionts, and short chain fatty acids: a longitudinal study over the first year of life.
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Associations Between Nutrition, Gut Microbiome, and Health in A Novel Nonhuman Primate Model.
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Bacterial contamination associated with estuarine shoreline development
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Bacterial gastroenteritis.
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Bamboo Specialists from Two Mammalian Orders (Primates, Carnivora) Share a High Number of Low-Abundance Gut Microbes.
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Barriers to full colon evaluation for a positive fecal occult blood test.
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Black stool. Some light on a dark subject.
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Broad-range (pan) Salmonella and Salmonella serotype typhi-specific real-time PCR assays: potential tools for the clinical microbiologist.
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Burden of childhood rotavirus disease on health systems in the United States.
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Calprotectin: a novel noninvasive marker for intestinal allograft monitoring.
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Campylobacter enteritis.
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Campylobacter enteritis: clinical and epidemiologic features.
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Caught on Colonoscopy: Schistosomiasis Manifesting as a Single Colonic Polyp.
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Causal Pathways from Enteropathogens to Environmental Enteropathy: Findings from the MAL-ED Birth Cohort Study.
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Cholesterol homeotasis in rats fed a purified diet.
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Chronic pouchitis after ileal pouch-anal anastomosis: responses to butyrate and glutamine suppositories in a pilot study.
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Clostridium difficile infection and treatment in the pediatric inflammatory bowel disease population.
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Coming of age: steroid hormones of wild immature baboons, Papio cynocephalus
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Common methods for fecal sample storage in field studies yield consistent signatures of individual identity in microbiome sequencing data.
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Comparative analysis of environmental and clinical populations of Cryptococcus neoformans.
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Comparative evaluation of a new magnetic bead-based DNA extraction method from fecal samples for downstream next-generation 16S rRNA gene sequencing.
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Comparison of CampyPak II with standard 5% oxygen and candle jars for growth of Campylobacter jejuni from human feces.
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Comparison of atmospheres of incubation for primary isolation of Campylobacter fetus subsp. jejuni from animal specimens: 5% oxygen versus candle jar.
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Comparison of fecal biota from specific pathogen free and feral mice.
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Comparison of four plating media for isolating Vibrio cholerae.
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Comparison of two rapid assays for Clostridium difficile Common antigen and a C difficile toxin A/B assay with the cell culture neutralization assay.
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Concerted use of immunologic and ultrastructural analyses in diagnostic medicine: immunoelectron microscopy and correlative microscopy.
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Concessions of an alpha male? Cooperative defence and shared reproduction in multi-male primate groups.
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Contemporary testing for enteric pathogens: the potential for cost, time, and health care savings.
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Coproexamination for botulinal toxin and clostridium botulinum. A new procedure for laboratory diagnosis of botulism.
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Cost and time savings following introduction of rejection criteria for clinical specimens.
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Criterion-related validity of a diarrhea questionnaire in HIV-infected patients.
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Cryptococcus neoformans mates on pigeon guano: implications for the realized ecological niche and globalization.
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Cryptococcus neoformans shows a remarkable genotypic diversity in Brazil.
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Cryptosporidium-malnutrition interactions: mucosal disruption, cytokines, and TLR signaling in a weaned murine model.
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Current trends in botulism in the United States.
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Daily variability in mineral metabolites in CKD and effects of dietary calcium and calcitriol.
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Dark-field microscopy of human feces for presumptive diagnosis of Campylobacter fetus subsp. jejuni enteritis.
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Demographic and ecological effects on patterns of parasitism in eastern chimpanzees (Pan troglodytes schweinfurthii) in Gombe National Park, Tanzania.
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Destabilization of the gut microbiome marks the end-stage of simian immunodeficiency virus infection in wild chimpanzees.
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Detecting colorectal cancer in stool with the use of multiple genetic targets.
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Detection and Quantification of Enteric Pathogens in Aerosols Near Open Wastewater Canals in Cities with Poor Sanitation.
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Detection of APC mutations in fecal DNA from patients with colorectal tumors.
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Detection of Clostridium difficile as a routine diagnosis: comparison of real-time PCR and enzyme immunoassay.
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Detection of Escherichia coli enterotoxins in stools.
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Detection of proximal colorectal cancers through analysis of faecal DNA.
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Detection of stool DNA mutations before and after treatment of colorectal neoplasia.
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Diagnosis of Giardia lamblia infections by detection of parasite-specific antigens.
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Diarrhea in a Patient With Combined Kidney-Pancreas Transplant.
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Diarrhoea associated with heat-stable enterotoxin-producing strains of Escherichia coli.
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Diet rapidly and reproducibly alters the human gut microbiome.
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Direct observation of hygiene in a Peruvian shantytown: not enough handwashing and too little water.
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Disease due to enterotoxigenic Escherichia coli in Bangladeshi adults: clinical aspects and a controlled trial of tetracycline.
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Disrupted Maturation of the Microbiota and Metabolome among Extremely Preterm Infants with Postnatal Growth Failure.
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Dissecting the in vivo metabolic potential of two human gut acetogens.
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Does this patient have a severe upper gastrointestinal bleed?
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Double-blind placebo controlled trial of erythromycin for treatment of Campylobacter enteritis.
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Duration of incubation of fungal cultures.
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Dynamic change of fecal calprotectin in very low birth weight infants during the first month of life.
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Editorial: Toxigenic turista.
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Effect of bismuth salts on systemic and mucosal immune responses to orally administered cholera toxin.
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Effect of incubation atmosphere and temperature on isolation of Campylobacter jejuni from human stools.
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Effect of trimethoprim-sulfamethoxazole prophylaxis on antimicrobial resistance of fecal Escherichia coli in HIV-infected patients in Tanzania.
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Effects of a gut pathobiont in a gnotobiotic mouse model of childhood undernutrition.
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Effects of anthropogenic disturbance on indri (Indri indri) health in Madagascar.
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Efficient Genome-Wide Sequencing and Low-Coverage Pedigree Analysis from Noninvasively Collected Samples.
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Endemic amebiasis in an extended family.
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Endocrinology of year-round reproduction in a highly seasonal habitat: environmental variability in testosterone and glucocorticoids in baboon males.
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Enriched brucella medium for storage and transport of cultures of Campylobacter fetus subsp. jejuni.
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Enteric viruses associated with HIV infection in Tanzanian children with chronic diarrhea.
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Enteroaggregative Escherichia coli Subclinical Infection and Coinfections and Impaired Child Growth in the MAL-ED Cohort Study.
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Enterotoxigenic Escherichia coli and Reovirus-like agent in rural Bangladesh.
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Environmental and Aerosolized Severe Acute Respiratory Syndrome Coronavirus 2 Among Hospitalized Coronavirus Disease 2019 Patients.
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Enzyme-linked immunosorbent assay for detection of Escherichia coli heat-labile enterotoxin.
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Epidemic shiga-bacillus dysentery in Central America. Evolution of the outbreak in El Salvador, 1969-70.
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Epidemiology of highly endemic multiply antibiotic-resistant shigellosis in children in the Peruvian Amazon.
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Estimation of energetic condition in wild baboons using fecal thyroid hormone determination.
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Evaluation of eight cephalosporins in hamster colitis model.
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Evaluation of transport media for Campylobacter jejuni in human fecal specimens.
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Evidence for a tradeoff between retention time and chewing efficiency in large mammalian herbivores.
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Evidence that ship noise increases stress in right whales.
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Factors associated with the diversification of the gut microbial communities within chimpanzees from Gombe National Park.
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Fatal, disseminated Acremonium strictum infection in a neutropenic host.
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Fecal IgA, Antigen Absorption, and Gut Microbiome Composition Are Associated With Food Antigen Sensitization in Genetically Susceptible Mice.
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Fecal Malodor Detection Using Low-Cost Electrochemical Sensors.
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Fecal leukocytes in stool specimens submitted for Clostridium difficile toxin assay.
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Fecal microbiota diversity disruption and clinical outcomes after auto-HCT: a multicenter observational study.
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Fecal pellet output does not always correlate with colonic transit in response to restraint stress and corticotropin-releasing factor in rats.
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Fecal steroids in diarrhea. II. Travellers' diarrhea.
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Feeding strategy shapes gut metagenomic enrichment and functional specialization in captive lemurs.
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Fluorescent-antibody test for detection of Clostridium difficile in stool specimens.
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Foci of endemic simian immunodeficiency virus infection in wild-living eastern chimpanzees (Pan troglodytes schweinfurthii).
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Fungal farming in a snail.
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Gastrointestinal illness on passenger cruise ships.
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Gastrointestinal microbiota alteration induced by Mucor circinelloides in a murine model.
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Generation of infectious molecular clones of simian immunodeficiency virus from fecal consensus sequences of wild chimpanzees.
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Glucocorticoid exposure predicts survival in female baboons.
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Gross intestinal morphometry and allometry in ruminants.
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Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children.
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Gut dysbiosis promotes M2 macrophage polarization and allergic airway inflammation via fungi-induced PGE₂.
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Gut microbiome contributions to altered metabolism in a pig model of undernutrition.
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Gut microbiome heritability is nearly universal but environmentally contingent.
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Gut microbiota from twins discordant for obesity modulate metabolism in mice.
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Hepatitis B antigen in saliva, urine, and stool.
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Hexabromonaphthalene contaminants of polybrominated biphenyls: chemical composition and disposition in the rat.
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High-fat diet-induced colonocyte dysfunction escalates microbiota-derived trimethylamine N-oxide.
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Higher dominance rank is associated with lower glucocorticoids in wild female baboons: A rank metric comparison.
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Hormonal correlates of natal dispersal and rank attainment in wild male baboons.
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Host lifestyle affects human microbiota on daily timescales.
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Human colonic biota studied by ribosomal DNA sequence analysis.
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Human secretory immunoglobulin A may contribute to biofilm formation in the gut.
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Hypolipidemic activity of tetrakis-mu-(trimethylamine-boranecarboxylato)-bis(trimethylamin e- carboxyborane)-dicopper(II) in rodents and its effect on lipid metabolism.
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Impact of Simian Immunodeficiency Virus Infection on Chimpanzee Population Dynamics.
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Impact of strain type on detection of toxigenic Clostridium difficile: comparison of molecular diagnostic and enzyme immunoassay approaches.
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Inadequate Utilization of Diagnostic Colonoscopy Following Abnormal FIT Results in an Integrated Safety-Net System.
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Incidence and biomarkers of pregnancy, spontaneous abortion, and neonatal loss during an environmental stressor: Implications for female reproductive suppression in the cooperatively breeding meerkat.
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Indicator species characterization and removal in a detention pond in the Plaster Creek watershed.
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Interactions between gut microbiota and metabolites modulate cytokine network imbalances in women with unexplained miscarriage.
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Interbirth intervals in wild baboons: Environmental predictors and hormonal correlates.
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Intestinal Microbiota and Relapse After Hematopoietic-Cell Transplantation.
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Intestinal adaptation after ileal interposition surgery increases bile acid recycling and protects against obesity-related comorbidities.
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Intestinal alkaline phosphatase promotes gut bacterial growth by reducing the concentration of luminal nucleotide triphosphates.
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Intestinal permeability and inflammation mediate the association between nutrient density of complementary foods and biochemical measures of micronutrient status in young children: results from the MAL-ED study.
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Isocoproporphyrin: nuclear-magnetic-resonance-and mass-spectral methods for the determination of porphyrin structure.
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Laboratory investigation of diarrhea in travelers to Mexico: evaluation of methods for detecting enterotoxigenic Echerichia coli.
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Lactose drives Enterococcus expansion to promote graft-versus-host disease.
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Life at the top: rank and stress in wild male baboons.
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Life-history correlates of steroid concentrations in wild peripartum baboons.
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Limulus amebocyte lysate test in neonates.
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Long-term stability of microbiome diversity and composition in fecal samples stored in eNAT medium.
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Luminally released serotonin stimulates colonic motility and accelerates colonic transit in rats.
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Maternal and Breast Milk Influences on the Infant Gut Microbiome, Enteric Health and Growth Outcomes of Rhesus Monkeys.
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Measuring fecal testosterone in females and fecal estrogens in males: comparison of RIA and LC/MS/MS methods for wild baboons (Papio cynocephalus).
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Mechanisms of sexual selection: sexual swellings and estrogen concentrations as fertility indicators and cues for male consort decisions in wild baboons.
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Metabarcoding of eukaryotic parasite communities describes diverse parasite assemblages spanning the primate phylogeny.
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Metabolic balance of manganese in young men consuming diets containing five levels of dietary manganese.
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Microbial nitrogen limitation in the mammalian large intestine.
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Microbiota as Predictor of Mortality in Allogeneic Hematopoietic-Cell Transplantation.
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Microbiota responses to different prebiotics are conserved within individuals and associated with habitual fiber intake.
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Mig-6 plays a critical role in the regulation of cholesterol homeostasis and bile acid synthesis.
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Modeling the relationship between most probable number (MPN) and colony-forming unit (CFU) estimates of fecal coliform concentration.
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Molecular approaches for colorectal cancer screening.
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Molecular ecology and natural history of simian foamy virus infection in wild-living chimpanzees.
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Morphological Identification of Hair Recovered from Feces for Detection of Cannibalism in Eastern Chimpanzees.
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Motility-indole-lysine medium for presumptive identification of enteric pathogens of Enterobacteriaceae.
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Moving beyond microbiome-wide associations to causal microbe identification.
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Multicolor in vitro translation.
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Mycobacteria in stool specimens: the nonvalue of smears for predicting culture results.
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Nano-architectural alterations in mucus layer fecal colonocytes in field carcinogenesis: potential for screening.
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Neonatal Rhesus Macaques Have Distinct Immune Cell Transcriptional Profiles following HIV Envelope Immunization.
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Non-invasive body temperature measurement of wild chimpanzees using fecal temperature decline.
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Noninvasive paternity assignment in Gombe chimpanzees.
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Norovirus Infection and Acquired Immunity in 8 Countries: Results From the MAL-ED Study.
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Novel circular DNA viruses in stool samples of wild-living chimpanzees.
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Nuclear DNA from primate dug
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Nursing assessment of guaiac-positive and occult blood in preterm infant stools.
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Nutrient removal from human fecal sludge digestate in full-scale biological filters.
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Obese humans with nonalcoholic fatty liver disease display alterations in fecal microbiota and volatile organic compounds.
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Oral immunogenicity of the plant proteinase bromelain.
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Oral polio vaccine response in the MAL-ED birth cohort study: Considerations for polio eradication strategies.
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Origins of fecal neutral steroids in rats.
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Outbreaks of acute gastroenteritis associated with Norwalk-like viruses in campus settings.
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Pathogen-specific burdens of community diarrhoea in developing countries: a multisite birth cohort study (MAL-ED).
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Patterns of gut bacterial colonization in three primate species.
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Persistence of maternal effects in baboons: Mother's dominance rank at son's conception predicts stress hormone levels in subadult males.
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Phencyclidine disposition in humans after small doses of radiolabeled drug.
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Physiological mechanisms of sustained fumagillin-induced weight loss.
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Practice guidelines for the management of infectious diarrhea.
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Prevention of antibiotic-associated metabolic syndrome in mice by intestinal alkaline phosphatase.
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Prior Dietary Practices and Connections to a Human Gut Microbial Metacommunity Alter Responses to Diet Interventions.
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Proteobacteria abundance during nursing predicts physical growth and brain volume at one year of age in young rhesus monkeys.
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Proteolytic activity and immunogenicity of oral bromelain within the gastrointestinal tract of mice.
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REVIEW: Assessing North Atlantic right whale health: threats, and development of tools critical for conservation of the species.
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Rapid changes in the gut microbiome during human evolution.
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Restoring the Microbiome in Critically Ill Patients: Are Probiotics Our True Friends When We Are Seriously Ill?
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Restraint stress stimulates colonic motility via central corticotropin-releasing factor and peripheral 5-HT3 receptors in conscious rats.
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Risk factors for and estimated incidence of community-associated Clostridium difficile infection, North Carolina, USA.
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SIV-induced instability of the chimpanzee gut microbiome.
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SIVcpz in wild chimpanzees.
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Safety, immunogenicity and efficacy in healthy infants of G1 and G2 human reassortant rotavirus vaccine in a new stabilizer/buffer liquid formulation.
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Screening for Colorectal Cancer: US Preventive Services Task Force Recommendation Statement.
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Seasonal patterns in risk factors for Taenia solium transmission: a GPS tracking study of pigs and open human defecation in northern Peru.
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Seasonality, sociality, and reproduction: Long-term stressors of ring-tailed lemurs (Lemur catta).
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Secretory IgA and mucin-mediated biofilm formation by environmental strains of Escherichia coli: role of type 1 pili.
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Sensitive digital quantification of DNA methylation in clinical samples.
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Sensor-Array Optimization Based on Time-Series Data Analytics for Sanitation-Related Malodor Detection.
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Shigellosis in custodial institutions.
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Short-Chain Fatty Acid Production by Gut Microbiota from Children with Obesity Differs According to Prebiotic Choice and Bacterial Community Composition.
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Short-chain fatty acids stimulate colonic transit via intraluminal 5-HT release in rats.
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Sialylated Milk Oligosaccharides Promote Microbiota-Dependent Growth in Models of Infant Undernutrition.
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Signature Patterns of MHC Diversity in Three Gombe Communities of Wild Chimpanzees Reflect Fitness in Reproduction and Immune Defense against SIVcpz.
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Six-year retrospective surveillance of gastroenteritis viruses identified at ten electron microscopy centers in the United States and Canada.
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Social bonds do not mediate the relationship between early adversity and adult glucocorticoids in wild baboons.
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Social networks predict gut microbiome composition in wild baboons.
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Soil-transmitted helminth eggs assessment in wastewater in an urban area in India.
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Spatial organization of bacterial flora in normal and inflamed intestine: a fluorescence in situ hybridization study in mice.
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Splenda alters gut microflora and increases intestinal p-glycoprotein and cytochrome p-450 in male rats.
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Stool appearance in intussusception: assessing the value of the term "currant jelly".
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Stool calprotectin monitoring after small intestine transplantation.
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Studies on the epidemiology of antibiotic-associated Clostridium difficile colitis.
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Supercritical water oxidation of a model fecal sludge without the use of a co-fuel.
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Symptom outcomes important to women with anal incontinence: a conceptual framework.
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Testosterone positively associated with both male mating effort and paternal behavior in Savanna baboons (Papio cynocephalus).
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Testosterone related to age and life-history stages in male baboons and geladas.
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The Gut Microbiota Modulates Energy Metabolism in the Hibernating Brown Bear Ursus arctos.
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The Pediatric Obesity Microbiome and Metabolism Study (POMMS): Methods, Baseline Data, and Early Insights.
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The United States National Prospective Hemolytic Uremic Syndrome Study: microbiologic, serologic, clinical, and epidemiologic findings.
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The endocrinology of pregnancy and fetal loss in wild baboons.
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The microbe-derived short-chain fatty acids butyrate and propionate are associated with protection from chronic GVHD.
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The severity of nonalcoholic fatty liver disease is associated with gut dysbiosis and shift in the metabolic function of the gut microbiota.
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The spread of fecally transmitted parasites in socially-structured populations.
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The stepwise assembly of the neonatal virome is modulated by breastfeeding.
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Thin-layer and gas--liquid chromatographic identification of neutral steroids in human and rat feces.
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Timing of complementary feeding is associated with gut microbiota diversity and composition and short chain fatty acid concentrations over the first year of life.
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Travelers' diarrhea in Mexico. A prospective study of physicians and family members attending a congress.
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Use of colony pools for diagnosis of enterotoxigenic Escherichia coli diarrhea.
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Use of sodium taurocholate to enhance spore recovery on a medium selective for Clostridium difficile.
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Wildlife identified as major source of Escherichia coli in agriculturally dominated watersheds by BOX A1R-derived genetic fingerprints.
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Yield of stool culture with isolate toxin testing versus a two-step algorithm including stool toxin testing for detection of toxigenic Clostridium difficile.
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Zoonotic enteric parasites in Mongolian people, animals, and the environment: Using One Health to address shared pathogens.