-
Subject Areas on Research
-
"Giant" tamarin from the Miocene of Colombia.
-
. Loss of sexual recombination and segregation is associated with increased diversification in evening primroses.
-
100 years of primate paleontology.
-
137 ancient human genomes from across the Eurasian steppes.
-
17th
Century Variola Virus Reveals the Recent History of Smallpox.
-
29 mammalian genomes reveal novel exaptations of mobile elements for likely regulatory functions in the human genome.
-
A Fringe-modified Notch signal affects specification of mesoderm and endoderm in the sea urchin embryo.
-
A High-Resolution Time Series Reveals Distinct Seasonal Patterns of Planktonic Fungi at a Temperate Coastal Ocean Site (Beaufort, North Carolina, USA).
-
A Rapidly Evolving Polybasic Motif Modulates Bacterial Detection by Guanylate Binding Proteins.
-
A Systematic Analysis of Mosquito-Microbiome Biosynthetic Gene Clusters Reveals Antimalarial Siderophores that Reduce Mosquito Reproduction Capacity.
-
A TOMM40 variable-length polymorphism predicts the age of late-onset Alzheimer's disease.
-
A calcaneus attributable to the primitive late Eocene anthropoid Proteopithecus sylviae: phenetic affinities and phylogenetic implications.
-
A catalog of neutral and deleterious polymorphism in yeast.
-
A class of viral inducer of degradation of the necroptosis adaptor RIPK3 regulates virus-induced inflammation.
-
A closely-related clade of globally distributed bloom-forming cyanobacteria within the Nostocales.
-
A cluster of HIV type 1 subtype C sequences from Ethiopia, observed in full genome analysis, is not sustained in subgenomic regions.
-
A comparative analysis of temporomandibular joint morphology in the African apes.
-
A comparative study of leukocyte counts and disease risk in primates.
-
A comparative study of white blood cell counts and disease risk in carnivores.
-
A comparison of major histocompatibility complex SNPs in Han Chinese residing in Taiwan and Caucasians.
-
A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome.
-
A comparison of the community diversity of foliar fungal endophytes between seedling and adult loblolly pines (Pinus taeda).
-
A comparison of the genes coding for canonical TRP channels and their M, V and P relatives.
-
A comprehensive panel of near-full-length clones and reference sequences for non-subtype B isolates of human immunodeficiency virus type 1.
-
A conserved acidic patch in the Myb domain is required for activation of an endogenous target gene and for chromatin binding.
-
A critique of homology as a morphological concept.
-
A digital collection of rare and endangered lemurs and other primates from the Duke Lemur Center.
-
A dimensionless number for understanding the evolutionary dynamics of antigenically variable RNA viruses
-
A distal enhancer and an ultraconserved exon are derived from a novel retroposon.
-
A eukaryote-like cardiolipin synthase is present in Streptomyces coelicolor and in most actinobacteria.
-
A first complete phylogenomic hypothesis for diploid blueberries (Vaccinium section Cyanococcus).
-
A five-gene phylogeny of Pezizomycotina.
-
A fossil primate of uncertain affinities from the earliest late Eocene of Egypt.
-
A framework phylogeny of the American oak clade based on sequenced RAD data.
-
A gain-of-function mutation in IAA16 confers reduced responses to auxin and abscisic acid and impedes plant growth and fertility.
-
A gain-of-function mutation in a plant disease resistance gene leads to constitutive activation of downstream signal transduction pathways in the snc1 mutant
-
A generalized least-squares estimate for the origin of sporophytic self-incompatibility.
-
A genetic legacy of introgression confounds phylogeny and biogeography in oaks.
-
A genome-wide survey of copy number variations in Han Chinese residing in Taiwan.
-
A genome-wide survey of the evolutionarily conserved Wnt pathways in the sea urchin Strongylocentrotus purpuratus.
-
A genomic catalog of Earth's microbiomes.
-
A global meta-analysis of Tuber ITS rDNA sequences: species diversity, host associations and long-distance dispersal.
-
A glucan synthase FKS1 homolog in cryptococcus neoformans is single copy and encodes an essential function.
-
A high-resolution map of human evolutionary constraint using 29 mammals.
-
A higher-level phylogenetic classification of the Fungi
-
A hot-vent gastropod with iron sulfide dermal sclerites.
-
A kinesin family tree.
-
A molecular phylogeny of the fern family Pteridaceae: assessing overall relationships and the affinities of previously unsampled genera
-
A molecular phylogeny of the flagellated fungi (Chytridiomycota) and description of a new phylum (Blastocladiomycota).
-
A multi-locus molecular phylogeny of the Lepidoziaceae: laying the foundations for a stable classification.
-
A multifactor analysis of fungal and bacterial community structure in the root microbiome of mature Populus deltoides trees.
-
A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families.
-
A multimodal cell census and atlas of the mammalian primary motor cortex.
-
A new circulating recombinant form, CRF15_01B, reinforces the linkage between IDU and heterosexual epidemics in Thailand.
-
A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes.
-
A new fully automated approach for aligning and comparing shapes.
-
A new kinesin tree.
-
A new lineage in Pucciniomycotina: class Tritirachiomycetes, order Tritirachiales, family Tritirachiaceae.
-
A new perspective on lower metazoan relationships from 18S rDNA sequences.
-
A new phylogenetic data standard for computable clade definitions: the Phyloreference Exchange Format (Phyx).
-
A new pitheciin primate from the middle Miocene of Argentina.
-
A non-lens member of the beta gamma-crystallin superfamily in a vertebrate, the amphibian Cynops.
-
A note on RNA polymerase phylogeny.
-
A novel experimental system using the liverwort Marchantia polymorpha and its fungal endophytes reveals diverse and context-dependent effects.
-
A novel method for comparative analysis of retinal specialization traits from topographic maps.
-
A novel murine protein with no effect on iron homoeostasis is homologous with transferrin and is the putative inhibitor of carbonic anhydrase.
-
A novel thermostable branching enzyme from an extremely thermophilic bacterial species, Rhodothermus obamensis.
-
A phylogeny of Adelanthaceae (Jungermanniales, Marchantiophyta) based on nuclear and chloroplast DNA markers, with comments on classification, cryptic speciation and biogeography.
-
A phylogeny of the northern temperate leafy liverwort genus Scapania (Scapaniaceae, Jungermanniales).
-
A phylogeographically distinct and deep divergence in the widespread Neotropical turnip-tailed gecko, Thecadactylus rapicauda.
-
A phylotranscriptomic analysis of gene family expansion and evolution in the largest order of pleurocarpous mosses (Hypnales, Bryophyta).
-
A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data.
-
A preliminary analysis of correlated evolution in Mammalian chewing motor patterns.
-
A preliminary analysis of correlations between chewing motor patterns and mandibular morphology across mammals.
-
A re-evaluation of 12S ribosomal RNA variability in Drosophila pseudoobscura.
-
A recent outbreak of human immunodeficiency virus type 1 infection in southern China was initiated by two highly homogeneous, geographically separated strains, circulating recombinant form AE and a novel BC recombinant.
-
A refined model of the genomic basis for phenotypic variation in vertebrate hemostasis.
-
A review of electroencephalographic features of normal sleep.
-
A role for a lithium-inhibited Golgi nucleotidase in skeletal development and sulfation.
-
A signature in HIV-1 envelope leader peptide associated with transition from acute to chronic infection impacts envelope processing and infectivity.
-
A simulation test of Smith's "Degrees of freedom" correction for comparative studies.
-
A stochastic evolutionary model for protein structure alignment and phylogeny.
-
A suppressor/enhancer screen in Drosophila reveals a role for wnt-mediated lipid metabolism in primordial germ cell migration.
-
A survey of plant and algal genomes and transcriptomes reveals new insights into the evolution and function of the cellulose synthase superfamily.
-
A taxonomic monograph of Ipomoea integrated across phylogenetic scales.
-
A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny.
-
A voltage-gated calcium-selective channel encoded by a sodium channel-like gene.
-
A(r)Ray of hope in analysis of the function and diversity of microbial communities.
-
Abrupt deceleration of molecular evolution linked to the origin of arborescence in ferns.
-
Absolute brain size predicts dog breed differences in executive function.
-
Abundance and diversity of Schizophyllum commune spore clouds in the Caribbean detected by selective sampling.
-
Adaptive Transcriptome Profiling of Subterranean Zokor, Myospalax baileyi, to High- Altitude Stresses in Tibet.
-
Adaptive evolution drives the diversification of zinc-finger binding domains.
-
African origin of the malaria parasite Plasmodium vivax.
-
African strains of hepatitis E virus that are distinct from Asian strains.
-
Aging in the natural world: comparative data reveal similar mortality patterns across primates.
-
Align or not to align? Resolving species complexes within the Caloplaca saxicola group as a case study.
-
Allelic diversity and gene genealogy at the self-incompatibility locus in the Solanaceae.
-
Allelic diversity in the TGFB1 regulatory region: characterization of novel functional single nucleotide polymorphisms.
-
Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons.
-
Amt2 permease is required to induce ammonium-responsive invasive growth and mating in Cryptococcus neoformans.
-
An alignment-free method to identify candidate orthologous enhancers in multiple Drosophila genomes.
-
An examination of the monophyly of morning glory taxa using Bayesian phylogenetic inference.
-
An improved germline genome assembly for the sea lamprey Petromyzon marinus illuminates the evolution of germline-specific chromosomes.
-
An in-depth investigation of cryptic taxonomic diversity in the rare endemic mustard Draba maguirei.
-
An isolate of human immunodeficiency virus type 1 originally classified as subtype I represents a complex mosaic comprising three different group M subtypes (A, G, and I).
-
Analyses of transcriptome sequences reveal multiple ancient large-scale duplication events in the ancestor of Sphagnopsida (Bryophyta).
-
Analysis of Dengue Serotype 4 in Sri Lanka during the 2012-2013 Dengue Epidemic.
-
Analysis of genes coding for small-subunit rRNA sequences in studying phylogenetics of dematiaceous fungal pathogens.
-
Analysis of genes coding for small-subunit rRNA sequences in studying phylogenetics of dematiaceous fungal pathogens.
-
Analysis of partial pol and env sequences indicates a high prevalence of HIV type 1 recombinant strains circulating in Gabon.
-
Analysis of synaptic gene expression in the neocortex of primates reveals evolutionary changes in glutamatergic neurotransmission.
-
Analysis of the mouse transcriptome for genes involved in the function of the nervous system.
-
Ancestral and consensus envelope immunogens for HIV-1 subtype C.
-
Ancestral population genomics: the coalescent hidden Markov model approach.
-
Ancient DNA from Megaladapis edwardsi.
-
Ancient DNA from giant extinct lemurs confirms single origin of Malagasy primates.
-
Ancient Gene Duplications, Rather Than Polyploidization, Facilitate Diversification of Petal Pigmentation Patterns in Clarkia gracilis (Onagraceae).
-
Ancient West African foragers in the context of African population history.
-
Ancient and recent patterns of geographic speciation in the oyster mushroom Pleurotus revealed by phylogenetic analysis of ribosomal DNA sequences.
-
Ancient and recent positive selection transformed opioid cis-regulation in humans.
-
Ancient bacterial endosymbionts of insects: Genomes as sources of insight and springboards for inquiry.
-
Ancient co-speciation of simian foamy viruses and primates.
-
Ancient polymorphism and functional variation in the primate MHC-DQA1 5' cis-regulatory region.
-
Ancient single origin for Malagasy primates.
-
Annual Partitioning Patterns of Labyrinthulomycetes Protists Reveal Their Multifaceted Role in Marine Microbial Food Webs.
-
Anthropoid origins.
-
Anthropology. New World monkey origins.
-
Antibody light-chain-restricted recognition of the site of immune pressure in the RV144 HIV-1 vaccine trial is phylogenetically conserved.
-
Application and accuracy of molecular phylogenies.
-
Aquacultured rainbow trout (Oncorhynchus mykiss) possess a large core intestinal microbiota that is resistant to variation in diet and rearing density.
-
Aquaporins in Saccharomyces. Genetic and functional distinctions between laboratory and wild-type strains.
-
Arabidopsis CAND1, an unmodified CUL1-interacting protein, is involved in multiple developmental pathways controlled by ubiquitin/proteasome-mediated protein Degradation.
-
Are neuromotor systems conserved in evolution?
-
Aridity drove the evolution of extreme embolism resistance and the radiation of conifer genus Callitris.
-
Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences.
-
Asexual organisms, identity and vertical gene transfer.
-
Assessing Bayesian Phylogenetic Information Content of Morphological Data Using Knowledge From Anatomy Ontologies.
-
Assessing population structure and host specialization in lichenized cyanobacteria.
-
Assessing reproductive isolation in highly diverse communities of the lichen-forming fungal genus peltigera.
-
Assignment of the agent of Tyzzer's disease to Clostridium piliforme comb. nov. on the basis of 16S rRNA sequence analysis.
-
Association Between Breast Milk Bacterial Communities and Establishment and Development of the Infant Gut Microbiome.
-
Association between 16S-23S internal transcribed spacer sequence groups of Mycobacterium avium complex and pulmonary disease.
-
Association of mtDNA haplogroup F with healthy longevity in the female Chuang population, China.
-
Astragalar morphology of Afradapis, a large adapiform primate from the earliest late Eocene of Egypt.
-
Avian Binocularity and Adaptation to Nocturnal Environments: Genomic Insights from a Highly Derived Visual Phenotype.
-
Avian genomes. A flock of genomes. Introduction.
-
Bacterial community responses to a gradient of alkaline mountaintop mine drainage in Central Appalachian streams.
-
Bacteriophage flux in endosymbionts (Wolbachia): infection frequency, lateral transfer, and recombination rates.
-
Bamboo Specialists from Two Mammalian Orders (Primates, Carnivora) Share a High Number of Low-Abundance Gut Microbes.
-
Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence.
-
Beyond MRI: on the scientific value of combining non-human primate neuroimaging with metadata.
-
Beyond bacteria: a study of the enteric microbial consortium in extremely low birth weight infants.
-
Biochemical, cell biological and immunological issues surrounding the endoplasmic reticulum chaperone GRP94/gp96.
-
Biodiversity and Topographic Complexity: Modern and Geohistorical Perspectives.
-
Biogeography in deep time - What do phylogenetics, geology, and paleoclimate tell us about early platyrrhine evolution?
-
Biomechanics of running indicates endothermy in bipedal dinosaurs.
-
Birdsong neuroscience and the evolutionary substrates of learned vocalization.
-
Blurring the edges in vertebrate sex determination.
-
Bocavirus episome in infected human tissue contains non-identical termini.
-
Bone-associated gene evolution and the origin of flight in birds.
-
Broadening primate genomics: new insights into the ecology and evolution of primate gene regulation.
-
Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin.
-
Bryophyte diversity and evolution: windows into the early evolution of land plants.
-
Caenorhabditis elegans generates biologically relevant levels of genotoxic metabolites from aflatoxin B1 but not benzo[a]pyrene in vivo
-
Can three incongruence tests predict when data should be combined?
-
Captivity humanizes the primate microbiome.
-
Cardiac xenografts between primate species provide evidence for the importance of the alpha-galactosyl determinant in hyperacute rejection.
-
Catarrhine hallucal metatarsals from the early Miocene site of Songhor, Kenya.
-
Changes in gene expression associated with reproductive maturation in wild female baboons.
-
Characterization of Mycobacterium montefiorense sp. nov., a novel pathogenic Mycobacterium from moray eels that is related to Mycobacterium triplex.
-
Characterization of a new family of protein kinases from Arabidopsis containing phosphoinositide 3/4-kinase and ubiquitin-like domains.
-
Characterization of the Transmitted Virus in an Ongoing HIV-1 Epidemic Driven by Injecting Drug Use.
-
Characterization of the interleukin 1 receptor-associated kinase 4 (IRAK4)-encoding gene in salmonid fish: the functional copy is rearranged in Oncorhynchus mykiss and that factor can impair TLR signaling in mammalian cells.
-
Characterization of the rRNA genes of Ehrlichia chaffeensis and Anaplasma phagocytophila.
-
Characterization of turkey inducible nitric oxide synthase and identification of its expression in the intestinal epithelium following astrovirus infection.
-
Characterizing the phylogenetic specialism-generalism spectrum of mammal parasites.
-
Chemical characterization of oligosaccharides in the milk of six species of New and Old World monkeys.
-
Chemokine (C-C motif) receptor 5-using envelopes predominate in dual/mixed-tropic HIV from the plasma of drug-naive individuals.
-
Chicken perinatal troponin Ts are generated by a combination of novel and phylogenetically conserved alternative splicing pathways.
-
Chimpanzees return favors at a personal cost.
-
Chordin is required for neural but not axial development in sea urchin embryos.
-
Cladistic analysis and anthropoid origins.
-
Class-level relationships in the phylum Cnidaria: evidence from mitochondrial genome structure.
-
Class-level relationships in the phylum Cnidaria: molecular and morphological evidence.
-
Classification tree methods provide a multifactorial approach to predicting insular body size evolution in rodents.
-
Clinical and environmental isolates of Cryptococcus gattii from Australia that retain sexual fecundity.
-
Clinical implications of discordant viral and immune outcomes following protease inhibitor containing antiretroviral therapy for HIV-infected children.
-
Clonal amplification and maternal-infant transmission of nevirapine-resistant HIV-1 variants in breast milk following single-dose nevirapine prophylaxis.
-
Clonal analysis of human anti-V3 monoclonal antibodies selected by a V3 tetramer.
-
Clonal and spontaneous origins of fluconazole resistance in Candida albicans.
-
Clonal sequences recovered from plasma from patients with residual HIV-1 viremia and on intensified antiretroviral therapy are identical to replicating viral RNAs recovered from circulating resting CD4+ T cells.
-
Clonality and recombination in genetically differentiated subgroups of Cryptococcus gattii.
-
Cluster of oseltamivir-resistant 2009 pandemic influenza A (H1N1) virus infections on a hospital ward among immunocompromised patients--North Carolina, 2009.
-
Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus.
-
Coculturing of Mosquito-Microbiome Bacteria Promotes Heme Degradation in Elizabethkingia anophelis.
-
Colistin Resistance in Carbapenem-Resistant Klebsiella pneumoniae: Laboratory Detection and Impact on Mortality.
-
Combination therapy with anti-HIV-1 antibodies maintains viral suppression.
-
Combinatorial expression of TRPV channel proteins defines their sensory functions and subcellular localization in C. elegans neurons.
-
Combining and comparing morphometric shape descriptors with a molecular phylogeny: the case of fruit type evolution in Bornean Lithocarpus (Fagaceae)
-
Combining expression and comparative evolutionary analysis. The COBRA gene family.
-
Comment on "Grasping primate origins".
-
Community analysis reveals close affinities between endophytic and endolichenic fungi in mosses and lichens
-
Compact organization of rRNA genes in the filamentous fungus Ashbya gossypii.
-
Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris.
-
Comparative RNA sequencing reveals substantial genetic variation in endangered primates.
-
Comparative anatomy and phylogenetic distribution of the mammalian cecal appendix.
-
Comparative and functional genomics provide insights into the pathogenicity of dermatophytic fungi.
-
Comparative and population mitogenomic analyses of Madagascar's extinct, giant 'subfossil' lemurs.
-
Comparative cellular analysis of motor cortex in human, marmoset and mouse.
-
Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae).
-
Comparative functional morphology of the primate peroneal process.
-
Comparative gene genealogical analyses of strains of serotype AD identify recombination in populations of serotypes A and D in the human pathogenic yeast Cryptococcus neoformans.
-
Comparative genetic mapping in Boechera stricta, a close relative of Arabidopsis.
-
Comparative genomic analysis of fungal genomes reveals intron-rich ancestors.
-
Comparative genomics and regulatory evolution: conservation and function of the Chs and Apetala3 promoters.
-
Comparative genomics applied to Mucor species with different lifestyles.
-
Comparative genomics in the Brassicaceae: a family-wide perspective.
-
Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens.
-
Comparative genomics of mammalian hibernators using gene networks.
-
Comparative genomics reveals insights into avian genome evolution and adaptation.
-
Comparative phylogeography of unglaciated eastern North America.
-
Comparative population structure of two deep-sea hydrothermal-vent-associated decapods (Chorocaris sp. 2 and Munidopsis lauensis) from southwestern Pacific back-arc basins.
-
Comparative tests of evolutionary trade-offs in a palinurid lobster acoustic system.
-
Comparative tests of parasite species richness in primates.
-
Comparing levels of homoplasy in the primate skeleton.
-
Comparing ontogenetic trajectories using growth process data.
-
Comparison of 5.8S ribosomal DNA sequences among the basidiomycetous yeast genera Cystofilobasidium, Filobasidium and Filobasidiella.
-
Comparison of fecal biota from specific pathogen free and feral mice.
-
Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene Loci and calibration points, with application to a radiation of cute-looking mouse lemur species.
-
Comparison of ribosomal DNA ITS regions among geographic isolates of Cenococcum geophilum.
-
Comparison of the evolutionary dynamics of symbiotic and housekeeping loci: a case for the genetic coherence of rhizobial lineages.
-
Comparison of viral Env proteins from acute and chronic infections with subtype C human immunodeficiency virus type 1 identifies differences in glycosylation and CCR5 utilization and suggests a new strategy for immunogen design.
-
Competition for hummingbird pollination shapes flower color variation in Andean solanaceae.
-
Complete genome analysis of one of the earliest SIVcpzPtt strains from Gabon (SIVcpzGAB2).
-
Complete genome sequencing and analysis of six enterovirus 71 strains with different clinical phenotypes.
-
Complex evolutionary trajectories of sex chromosomes across bird taxa.
-
Complexities associated with the molecular and proteomic identification of Paecilomyces species in the clinical mycology laboratory.
-
Concatenation and concordance in the reconstruction of mouse lemur phylogeny: an empirical demonstration of the effect of allele sampling in phylogenetics.
-
Consensus and ancestral state HIV vaccines.
-
Conservation and diversification of SCARECROW in maize.
-
Conservation genomic analysis reveals ancient introgression and declining levels of genetic diversity in Madagascar's hibernating dwarf lemurs.
-
Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee.
-
Conservation of the chitin utilization pathway in the Vibrionaceae.
-
Conservation, duplication, and loss of the Tor signaling pathway in the fungal kingdom.
-
Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon.
-
Construction and phenotypic characterization of HIV type 1 functional envelope clones of subtypes G and F.
-
Contrasting quaternary histories in an ecologically divergent sister pair of low-dispersing intertidal fish (Xiphister) revealed by multilocus DNA analysis.
-
Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory.
-
Contribution of aerobic photoheterotrophic bacteria to the carbon cycle in the ocean.
-
Contribution of horizontal gene transfer to the evolution of Saccharomyces cerevisiae.
-
Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development.
-
Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota).
-
Convergent differential regulation of parvalbumin in the brains of vocal learners.
-
Convergent evolution of a complex fruit structure in the tribe Brassiceae (Brassicaceae).
-
Convergent evolution of anthropoid-like adaptations in Eocene adapiform primates.
-
Convergent evolution of bacterial ceramide synthesis.
-
Convergent evolution of chromosomal sex-determining regions in the animal and fungal kingdoms.
-
Convergent evolution of escape from hepaciviral antagonism in primates.
-
Convergent evolution of linked mating-type loci in basidiomycete fungi.
-
Coordinated genome-wide modifications within proximal promoter cis-regulatory elements during vertebrate evolution
-
Cordon-bleu is an actin nucleation factor and controls neuronal morphology.
-
Cospeciation between bacterial endosymbionts (Buchnera) and a recent radiation of aphids (Uroleucon) and pitfalls of testing for phylogenetic congruence.
-
Cospeciation of gut microbiota with hominids.
-
Craniodental and humeral morphology of a new species of Masrasector (Teratodontinae, Hyaenodonta, Placentalia) from the late Eocene of Egypt and locomotor diversity in hyaenodonts.
-
Cross-Reactive Immunity Among Flaviviruses.
-
Cross-clade human immunodeficiency virus (HIV)-specific cytotoxic T-lymphocyte responses in HIV-infected Zambians.
-
Cryptic Patterns of Speciation in Cryptic Primates: Microendemic Mouse Lemurs and the Multispecies Coalescent.
-
Cryptococcus gattii VGIII isolates causing infections in HIV/AIDS patients in Southern California: identification of the local environmental source as arboreal.
-
Cryptococcus neoformans Recovered From Olive Trees (Olea europaea) in Turkey Reveal Allopatry With African and South American Lineages.
-
Cryptococcus neoformans shows a remarkable genotypic diversity in Brazil.
-
Culture-based study of endophytes associated with rubber trees in Peru reveals a new class of Pezizomycotina: Xylonomycetes.
-
Cyanobacterial Blooms Are Not a Result of Positive Selection by Freshwater Eutrophication.
-
Cyanobacterial ribosomal RNA genes with multiple, endonuclease-encoding group I introns
-
Cyclic AMP-dependent protein kinase catalytic subunits have divergent roles in virulence factor production in two varieties of the fungal pathogen Cryptococcus neoformans.
-
Darwinian genomics and diversity in the tree of life.
-
Darwinius masillae is a strepsirrhine--a reply to Franzen et al. (2009).
-
Dating branches on the tree of life using DNA.
-
Deciding among green plants for whole genome studies.
-
Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing.
-
Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants.
-
Defining spatial and temporal patterns of phylogeographic structure in Madagascar's iguanid lizards (genus Oplurus).
-
Delimiting species without nuclear monophyly in Madagascar's mouse lemurs.
-
Dental formulae and dental eruption patterns in Parapithecidae (Primates, Anthropoidea).
-
Dental topography of platyrrhines and prosimians: convergence and contrasts.
-
Dependence of the cyanobacterium Prochlorococcus on hydrogen peroxide scavenging microbes for growth at the ocean's surface.
-
Detection of diverse variants of human immunodeficiency virus-1 groups M, N, and O and simian immunodeficiency viruses from chimpanzees by using generic pol and env primer pairs.
-
Development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar's lemurs.
-
Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza.
-
Development of Patient-specific AAV Vectors After Neutralizing Antibody Selection for Enhanced Muscle Gene Transfer.
-
Development of a tier 1 R5 clade C simian-human immunodeficiency virus as a tool to test neutralizing antibody-based immunoprophylaxis.
-
Development of an env gp41-based heteroduplex mobility assay for rapid human immunodeficiency virus type 1 subtyping.
-
Development of resistance mutations in women receiving standard antiretroviral therapy who received intrapartum nevirapine to prevent perinatal human immunodeficiency virus type 1 transmission: a substudy of pediatric AIDS clinical trials group protocol 316.
-
Developmental regulatory genes and echinoderm evolution.
-
Developmental roles of pufferfish Hox clusters and genome evolution in ray-fin fish.
-
Dietary inference from upper and lower molar morphology in platyrrhine primates.
-
Dietary quality and encephalization in platyrrhine primates.
-
Different evolutionary pathways of HIV-1 between fetus and mother perinatal transmission pairs indicate unique immune selection in fetuses.
-
Different models, different trees: the geographic origin of PTLV-I.
-
Differential expression of glutamate receptors in avian neural pathways for learned vocalization.
-
Differential patterns of male and female mtDNA exchange across the Atlantic Ocean in the blue mussel, Mytilus edulis.
-
Diploids in the Cryptococcus neoformans serotype A population homozygous for the alpha mating type originate via unisexual mating.
-
Discovery of prosimian and afrotherian foamy viruses and potential cross species transmissions amidst stable and ancient mammalian co-evolution.
-
Disentangling the Collema-Leptogium complex through a molecular phylogenetic study of the Collemataceae (Peltigerales, lichen-forming Ascomycota).
-
Distribution and diversity of planktonic fungi in the West Pacific Warm Pool.
-
Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta).
-
Divergence dates for Malagasy lemurs estimated from multiple gene loci: geological and evolutionary context.
-
Divergence in problem-solving skills is associated with differential expression of glutamate receptors in wild finches.
-
Divergence of protein kinase A catalytic subunits in Cryptococcus neoformans and Cryptococcus gattii illustrates evolutionary reconfiguration of a signaling cascade.
-
Diversification and the evolution of dispersal ability in the tribe Brassiceae (Brassicaceae).
-
Diversification before the most recent glaciation in Balanus glandula.
-
Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR.
-
Diversity considerations in HIV-1 vaccine selection.
-
Diversity in the weapons of sexual selection: horn evolution in the beetle genus Onthophagus (Coleoptera: Scarabaeidae).
-
Dmrt1 induces the male pathway in a turtle species with temperature-dependent sex determination.
-
Do animals living in larger groups experience greater parasitism? A meta-analysis.
-
Do asexual polyploid lineages lead short evolutionary lives? A case study from the fern genus Astrolepis
-
Do forelimb shape and peak forces co-vary in strepsirrhines?
-
Do threatened hosts have fewer parasites? A comparative study in primates.
-
Does sleep play a role in memory consolidation? A comparative test.
-
Donor-Derived Mycoplasma hominis and an Apparent Cluster of M. hominis Cases in Solid Organ Transplant Recipients.
-
Draft genome of the fungicidal biological control agent Burkholderia anthina strain XXVI.
-
Dramatic mitochondrial gene rearrangements in the hermit crab Pagurus longicarpus (Crustacea, anomura).
-
Drosophila p120catenin plays a supporting role in cell adhesion but is not an essential adherens junction component.
-
Drosophila stretchin-MLCK is a novel member of the Titin/Myosin light chain kinase family.
-
Drug resistance and HCV coinfection in former blood donors infected with HIV type 1 in China.
-
Dynamic evolution of base composition: causes and consequences in avian phylogenomics.
-
Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles.
-
Earliest record of Platychoerops (Primates, Plesiadapidae), a new species from Mouras Quarry, Mont de Berru, France.
-
Early specialization of the superfast myosin in extraocular and laryngeal muscles.
-
EchinoDB, an application for comparative transcriptomics of deeply-sampled clades of echinoderms.
-
Ecology and morphology of mouse lemurs (Microcebus spp.) in a hotspot of microendemism in northeastern Madagascar, with the description of a new species.
-
Ecology drives a global network of gene exchange connecting the human microbiome.
-
Ectomycorrhizal fungal community in a tropical forest dominated by the Neotropical Dipterocarp, Pakaraimea dipterocarpaceae
-
Ectomycorrhizal fungal diversity and community structure on three co-occurring leguminous canopy tree species in a Neotropical rainforest
-
Ectomycorrhizal fungal diversity in orchards of cultivated pecan (Carya illinoinensis; Juglandaceae).
-
Ectopic Expression of OsJAZs Alters Plant Defense and Development.
-
Effects of host extinction and vector preferences on vector-borne disease risk in phylogenetically structured host-hector communities.
-
Effects of the distribution of female primates on the number of males.
-
Embryonic expression of zebrafish MiT family genes tfe3b, tfeb, and tfec.
-
Emergence of SARS-CoV-2 through recombination and strong purifying selection.
-
Emerging HIV infections with distinct subtypes of HIV-1 infection among injection drug users from geographically separate locations in Guangxi Province, China.
-
Enfumafungin synthase represents a novel lineage of fungal triterpene cyclases.
-
Enhanced use of phylogenetic data to inform public health approaches to HIV among men who have sex with men.
-
Environmental and anthropogenic controls over bacterial communities in wetland soils.
-
Epidemiological investigation of vaginal Saccharomyces cerevisiae isolates by a genotypic method.
-
Escape from adaptive conflict after duplication in an anthocyanin pathway gene.
-
Estimating the normal background rate of species extinction.
-
Estimation of primate speciation dates using local molecular clocks.
-
Eulemur, me lemur: the evolution of scent-signal complexity in a primate clade.
-
Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae.
-
Evaluation of 23S rRNA PCR primers for use in phylogenetic studies of bacterial diversity.
-
Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition.
-
Evidence for a Cenozoic radiation of ferns in an angiosperm-dominated canopy
-
Evidence for a grooming claw in a North American adapiform primate: implications for anthropoid origins.
-
Evidence for a single loss of mineralized teeth in the common avian ancestor.
-
Evidence for reciprocal origins in Polypodium hesperium (Polypodiaceae): A fern model system for investigating how multiple origins shape allopolyploid genomes
-
Evidence from opsin genes rejects nocturnality in ancestral primates.
-
Evidence of two distinct subsubtypes within the HIV-1 subtype A radiation.
-
Evidence of viral adaptation to HLA class I-restricted immune pressure in chronic hepatitis C virus infection.
-
Evidence that the human pathogenic fungus Cryptococcus neoformans var. grubii may have evolved in Africa.
-
Evolution and allometry of calcaneal elongation in living and extinct primates.
-
Evolution and biogeography of deep-sea vent and seep invertebrates.
-
Evolution and diversity in human herpes simplex virus genomes.
-
Evolution and probable transmission of intersubtype recombinant human immunodeficiency virus type 1 in a Zambian couple.
-
Evolution of Pleopsidium (lichenized Ascomycota) S943 group I introns and the phylogeography of an intron-encoded putative homing endonuclease.
-
Evolution of budding yeast prion-determinant sequences across diverse fungi.
-
Evolution of calcium-carbonate skeletons in the Hydractiniidae.
-
Evolution of complex symbiotic relationships in a morphologically derived family of lichen-forming fungi.
-
Evolution of fungal sexual reproduction.
-
Evolution of genes and genomes on the Drosophila phylogeny.
-
Evolution of graded refractive index in squid lenses.
-
Evolution of king crabs from hermit crab ancestors.
-
Evolution of leaf form in marsileaceous ferns: evidence for heterochrony
-
Evolution of multiple paralogous adenosine kinase genes in the moss genus Hygroamblystegium: phylogenetic implications.
-
Evolution of niche preference in Sphagnum peat mosses.
-
Evolution of osmosensing OSCA1 Ca2+
channel family coincident with plant transition from water to land.
-
Evolution of pneumococcal serotype epidemiology in Botswana following introduction of 13-valent pneumococcal conjugate vaccine.
-
Evolution of postural diversity in primates as reflected by the size and shape of the medial tibial facet of the talus.
-
Evolution of sexual systems, dispersal strategies and habitat selection in the liverwort genus Radula.
-
Evolution of the 12 kDa FK506-binding protein gene.
-
Evolution of the MHC class I genes of a New World primate from ancestral homologues of human non-classical genes.
-
Evolution of the Wnt pathways.
-
Evolution of the gene encoding mitochondrial intermediate peptidase and its cosegregation with the A mating-type locus of mushroom fungi.
-
Evolution of the gene network underlying wing polyphenism in ants.
-
Evolution of the mating type locus: insights gained from the dimorphic primary fungal pathogens Histoplasma capsulatum, Coccidioides immitis, and Coccidioides posadasii.
-
Evolution of the sex-related locus and genomic features shared in microsporidia and fungi.
-
Evolution of the tenascin family--implications for function of the C-terminal fibrinogen-like domain.
-
Evolution of the trnF(GAA) gene in Arabidopsis relatives and the brassicaceae family: monophyletic origin and subsequent diversification of a plastidic pseudogene.
-
Evolution. Fossils versus clocks.
-
Evolution: spot on (and off).
-
Evolutionary and phylogenetic insights from a nuclear genome sequence of the extinct, giant, "subfossil" koala lemur Megaladapis edwardsi.
-
Evolutionary bottlenecks in the agents of tuberculosis, leprosy, and paratuberculosis.
-
Evolutionary disequilibrium and activity period in primates: a bayesian phylogenetic approach.
-
Evolutionary diversity is associated with wood productivity in Amazonian forests.
-
Evolutionary dynamics of sexual size dimorphism in non-volant mammals following their independent colonization of Madagascar.
-
Evolutionary genomics and adaptive evolution of the Hedgehog gene family (Shh, Ihh and Dhh) in vertebrates.
-
Evolutionary history of microsatellites in the obscura group of Drosophila.
-
Evolutionary origin of the latitudinal diversity gradient in liverworts.
-
Evolutionary rate variation in anthocyanin pathway genes.
-
Evolutionary relationships of endemic/epidemic and sylvatic dengue viruses.
-
Evolutionary relationships within the Neotropical, eusporangiate fern genus Danaea (Marattiaceae)
-
Evolutionary relationships within the fungi: analyses of nuclear small subunit rRNA sequences.
-
Expansion of the Stictidaceae by the addition of the saxicolous lichen-forming genus Ingvariella.
-
Expert consensus statement on the science of HIV in the context of criminal law.
-
Exploring syntenic conservation across genomes for phylogenetic studies of organisms subjected to horizontal gene transfers: A case study with Cyanobacteria and cyanolichens.
-
Exploring the Untapped Biosynthetic Potential of Apicomplexan Parasites.
-
Expression and functional analysis of Gm114, a putative mammalian ortholog of Drosophila bam.
-
Expression and trans-specific polymorphism of self-incompatibility RNases in coffea (Rubiaceae).
-
Expression of genes involved in symbiotic carbon and nitrogen transport in Pinus taeda mycorrhizal roots exposed to CO2 enrichment and nitrogen fertilization.
-
Expression of nifH genes in natural microbial assemblages in Lake George, New York, detected by reverse transcriptase PCR.
-
Extended ORF8 Gene Region Is Valuable in the Epidemiological Investigation of Severe Acute Respiratory Syndrome-Similar Coronavirus.
-
Extensive DNA sequence conservation throughout the Mycobacterium tuberculosis complex.
-
Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus.
-
Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. x divaricarpa, and A. holboellii (Brassicaceae).
-
FOS-1 promotes basement-membrane removal during anchor-cell invasion in C. elegans.
-
Failure of the ILD to determine data combinability for slow loris phylogeny.
-
Fast Dissemination of New HIV-1 CRF02/A1 Recombinants in Pakistan.
-
Fatal respiratory infection due to ST308 VIM-1-producing Pseudomonas aeruginosa in a lung transplant recipient: case report and review of the literature.
-
Feather development genes and associated regulatory innovation predate the origin of Dinosauria.
-
Features of Recently Transmitted HIV-1 Clade C Viruses that Impact Antibody Recognition: Implications for Active and Passive Immunization.
-
Fern genomes elucidate land plant evolution and cyanobacterial symbioses
-
Ferns diversified in the shadow of angiosperms.
-
Fine-scale phylogenetic architecture of a complex bacterial community.
-
Flavivirus serocomplex cross-reactive immunity is protective by activating heterologous memory CD4 T cells.
-
Form and function of the tongue in agamid lizards with comments on its phylogenetic significance.
-
Formalizing morphologically cryptic biological entities: new insights from DNA taxonomy, hybridization, and biogeography in the leafy liverwort Porella platyphylla (Jungermanniopsida, Porellales).
-
Fossil lemurs from Egypt and Kenya suggest an African origin for Madagascar's aye-aye.
-
Frizzled5/8 is required in secondary mesenchyme cells to initiate archenteron invagination during sea urchin development.
-
From offshore to onshore: multiple origins of shallow-water corals from deep-sea ancestors.
-
Functional and evolutionary aspects of axial stability in euarchontans and other mammals.
-
Functional associations between support use and forelimb shape in strepsirrhines and their relevance to inferring locomotor behavior in early primates.
-
Functional coordination between leaf gas exchange and vulnerability to xylem cavitation in temperate forest trees.
-
Functional evolution of an anthocyanin pathway enzyme during a flower color transition.
-
Functional evolution of mammalian odorant receptors.
-
Functional trait evolution in Sphagnum peat mosses and its relationship to niche construction.
-
Functionality of the TOL plasmid under varying environmental conditions following conjugal transfer.
-
Fungal community analysis by large-scale sequencing of environmental samples.
-
Fungi that Infect Humans.
-
G protein-coupled receptor Gpr4 senses amino acids and activates the cAMP-PKA pathway in Cryptococcus neoformans.
-
Gene Expression Profiling in the Hibernating Primate, Cheirogaleus Medius.
-
Gene Ontology annotations and resources.
-
Gene duplication in the diversification of secondary metabolism: tandem 2-oxoglutarate-dependent dioxygenases control glucosinolate biosynthesis in Arabidopsis.
-
Gene expression and larval evolution: changing roles of distal-less and orthodenticle in echinoderm larvae.
-
Gene expression divergence recapitulates the developmental hourglass model.
-
Gene loss, adaptive evolution and the co-evolution of plumage coloration genes with opsins in birds.
-
Generation of high curvature membranes mediated by direct endophilin bilayer interactions.
-
Generation of infectious molecular clones of simian immunodeficiency virus from fecal consensus sequences of wild chimpanzees.
-
Genes translocated into the plastid inverted repeat show decelerated substitution rates and elevated GC content
-
Genetic Characterization of a Panel of Diverse HIV-1 Isolates at Seven International Sites.
-
Genetic Dissection of Sexual Reproduction in a Primary Homothallic Basidiomycete.
-
Genetic Evidence of Importation of Drug-Resistant Plasmodium falciparum to Guatemala from the Democratic Republic of the Congo.
-
Genetic and Genomic Analyses Reveal Boundaries between Species Closely Related to Cryptococcus Pathogens.
-
Genetic and genomic evolution of sexual reproduction: echoes from LECA to the fungal kingdom.
-
Genetic and neutralization properties of subtype C human immunodeficiency virus type 1 molecular env clones from acute and early heterosexually acquired infections in Southern Africa.
-
Genetic and phenotypic changes accompanying the emergence of epizootic subtype IC Venezuelan equine encephalitis viruses from an enzootic subtype ID progenitor.
-
Genetic aspects of behavioral neurotoxicology.
-
Genetic bioaugmentation as an effective method for in situ bioremediation: functionality of catabolic plasmids following conjugal transfers.
-
Genetic changes associated with floral adaptation restrict future evolutionary potential.
-
Genetic changes contributing to the parallel evolution of red floral pigmentation among Ipomoea species.
-
Genetic comparisons yield insight into the evolution of enamel thickness during human evolution.
-
Genetic determinants in HIV-1 Gag and Env V3 are related to viral response to combination antiretroviral therapy with a protease inhibitor.
-
Genetic diversity among Mycobacterium avium complex strains recovered from children with and without human immunodeficiency virus infection.
-
Genetic diversity of human immunodeficiency virus type 2: evidence for distinct sequence subtypes with differences in virus biology.
-
Genetic diversity of the Cryptococcus species complex suggests that Cryptococcus gattii deserves to have varieties.
-
Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection.
-
Genetic relationships and evolution of genotypes of yellow fever virus and other members of the yellow fever virus group within the Flavivirus genus based on the 3' noncoding region.
-
Genetic signatures in the envelope glycoproteins of HIV-1 that associate with broadly neutralizing antibodies.
-
Genetic structure and genealogy in the Sphagnum subsecundum complex (Sphagnaceae: Bryophyta).
-
Genetic structure of typical and atypical populations of Candida albicans from Africa.
-
Genetic typing of HIV-2 from a Senegalese/German heterosexual transmission.
-
Genetic variation at a single locus and age of onset for Alzheimer's disease.
-
Genetic variation in horizontally transmitted fungal endophytes of pine needles reveals population structure in cryptic species.
-
Genetic variation in the 3' non-coding region of dengue viruses.
-
Genetic variation in yellow fever virus: duplication in the 3' noncoding region of strains from Africa.
-
Genetic variation of HIV type 1 in four World Health Organization-sponsored vaccine evaluation sites: generation of functional envelope (glycoprotein 160) clones representative of sequence subtypes A, B, C, and E. WHO Network for HIV Isolation and Characterization.
-
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation.
-
Genome evolution in an insect cell: distinct features of an ant-bacterial partnership.
-
Genome evolution in bacterial endosymbionts of insects.
-
Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789.
-
Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts.
-
Genome-based identification of spliceosomal proteins in the silk moth Bombyx mori.
-
Genome-scale transcriptomic insights into early-stage fruit development in woodland strawberry Fragaria vesca.
-
Genome-wide survey and expression analysis of the OSCA gene family in rice.
-
Genomic Characterisation of UFJF_PfDIW6: A Novel Lytic Pseudomonas fluorescens-Phage with Potential for Biocontrol in the Dairy Industry.
-
Genomic analysis of the origins and evolution of multicentric diffuse lower-grade gliomas.
-
Genomic erosion and extensive horizontal gene transfer in gut-associated Acetobacteraceae.
-
Genomic landscape of the global oak phylogeny.
-
Genomic structure and embryonic expression of estrogen receptor beta a (ERbetaa) in zebrafish (Danio rerio).
-
Genotypic and Phenotypic Diversity among Human Isolates of Akkermansia muciniphila.
-
Genotypic diversity of anaerobic isolates from bloodstream infections.
-
Genotypic diversity of coagulase-negative staphylococci causing endocarditis: a global perspective.
-
Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin.
-
Geogenetic patterns in mouse lemurs (genus Microcebus) reveal the ghosts of Madagascar's forests past.
-
Geographic and evolutionary diversification of glucosinolates among near relatives of Arabidopsis thaliana (Brassicaceae).
-
Geographic variation in algal partners of Cladonia subtenuis (Cladoniaceae) highlights the dynamic nature of a lichen symbiosis.
-
Germline sequences of V(H)7183 gene family members in C57BL/6 mice demonstrate natural selection of particular sequences during recent evolution.
-
Giant deep-sea protist produces bilaterian-like traces.
-
Gill-specific transcriptional regulation of Na+/K+ -ATPase alpha-subunit in the euryhaline shore crab Pachygrapsus marmoratus: sequence variants and promoter structure.
-
Global distribution, diversity hot spots and niche transitions of an astaxanthin-producing eukaryotic microbe.
-
Global panel of HIV-1 Env reference strains for standardized assessments of vaccine-elicited neutralizing antibodies.
-
Global patterns in peatmoss biodiversity.
-
Grasping primate origins.
-
Great ape genetic diversity and population history.
-
Great ranging associated with greater reproductive investment in mammals.
-
Gross intestinal morphometry and allometry in primates.
-
Gross intestinal morphometry and allometry in ruminants.
-
HBV whole-genome mutation profile in HIV-1/HBV coinfected patients in a long-term follow-up study.
-
HGT in the human and skin commensal Malassezia: A bacterially derived flavohemoglobin is required for NO resistance and host interaction.
-
HIV Transmission Patterns Among Immigrant Latinos Illuminated by the Integration of Phylogenetic and Migration Data.
-
HIV drug resistance in a cohort of HIV-infected MSM in the United States.
-
HIV evolution in early infection: selection pressures, patterns of insertion and deletion, and the impact of APOBEC.
-
HIV type 1 subtypes in Malaysia, determined with serologic assays: 1992-1996.
-
HIV-1 did not contribute to the 2019-nCoV genome.
-
HIV-1 diversity and compartmentalization in urine, semen, and blood.
-
HIV-1 sequence subtype D in the United States.
-
HIV-1 superinfection despite broad CD8+ T-cell responses containing replication of the primary virus.
-
Hemagglutinin stalk-based universal vaccine constructs protect against group 2 influenza A viruses.
-
Heterogeneous vancomycin-intermediate susceptibility phenotype in bloodstream methicillin-resistant Staphylococcus aureus isolates from an international cohort of patients with infective endocarditis: prevalence, genotype, and clinical significance.
-
Heterothallic mating in Mucor irregularis and first isolate of the species outside of Asia.
-
High diversity and widespread occurrence of mitotic spore mats in ectomycorrhizal Pezizales.
-
High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea.
-
High-density microarray of small-subunit ribosomal DNA probes.
-
Highly complex neutralization determinants on a monophyletic lineage of newly transmitted subtype C HIV-1 Env clones from India.
-
Historical biogeography and diversification of truffles in the Tuberaceae and their newly identified Southern hemisphere sister lineage
-
History and evolution of alpine plants endemic to the Qinghai-Tibetan Plateau: Aconitum gymnandrum (Ranunculaceae).
-
Homo naledi, a new species of the genus Homo from the Dinaledi Chamber, South Africa.
-
Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns
-
Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants.
-
Host availability drives distributions of fungal endophytes in the imperilled boreal realm.
-
Host density drives the postglacial migration of the tree parasite, Epifagus virginiana.
-
Host lifestyle affects human microbiota on daily timescales.
-
Host longevity and parasite species richness in mammals.
-
Host physiological phenotype explains pathogen reservoir potential.
-
Host-symbiont stability and fast evolutionary rates in an ant-bacterium association: cospeciation of camponotus species and their endosymbionts, candidatus blochmannia.
-
How does cognition evolve? Phylogenetic comparative psychology.
-
How petals change their spots: cis-regulatory re-wiring in Clarkia (Onagraceae).
-
How quickly do brains catch up with bodies? A comparative method for detecting evolutionary lag.
-
Human Blastomycosis in South Africa Caused by Blastomyces percursus and Blastomyces emzantsi sp. nov., 1967 to 2014.
-
Human Immunodeficiency Virus (HIV)-1 Transmission Among Persons With Acute HIV-1 Infection in Malawi: Demographic, Behavioral, and Phylogenetic Relationships.
-
Human colonic biota studied by ribosomal DNA sequence analysis.
-
Human gamma-satellite DNA maintains open chromatin structure and protects a transgene from epigenetic silencing.
-
Human immunodeficiency virus type 1 protease genotype predicts immune and viral responses to combination therapy with protease inhibitors (PIs) in PI-naive patients.
-
Human immunodeficiency virus type 1 subtype B ancestral envelope protein is functional and elicits neutralizing antibodies in rabbits similar to those elicited by a circulating subtype B envelope.
-
Human infection by genetically diverse SIVSM-related HIV-2 in west Africa.
-
Humeral head shape as an indicator of locomotor behavior in extant strepsirhines and Eocene adapids.
-
Hybrid origin of SIV in chimpanzees.
-
Hydrothermal vent fields and chemosynthetic biota on the world's deepest seafloor spreading centre.
-
Ice-age survival of Atlantic cod: agreement between palaeoecology models and genetics.
-
Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection.
-
Identification and localization of a sea urchin Notch homologue: insights into vegetal plate regionalization and Notch receptor regulation.
-
Identification of CRF34_01B, a second circulating recombinant form unrelated to and more complex than CRF15_01B, among injecting drug users in northern Thailand.
-
Identification of asteroid genera with species capable of larval cloning.
-
Identification of autoantigens recognized by the 2F5 and 4E10 broadly neutralizing HIV-1 antibodies.
-
Identification of fungi associated with municipal compost using DNA-based techniques.
-
Identification of new mamu-DRB alleles using DGGE and direct sequencing.
-
Identification of novel cellular targets in biliary tract cancers using global gene expression technology.
-
Identification of pathogenic yeasts of the imperfect genus Candida by polymerase chain reaction fingerprinting.
-
Identification of the sex genes in an early diverged fungus.
-
Identifying multiple origins of polyploid taxa: a multilocus study of the hybrid cloak fern (Astrolepis integerrima; Pteridaceae).
-
Immunization with recombinant canarypox vectors expressing membrane-anchored glycoprotein 120 followed by glycoprotein 160 boosting fails to generate antibodies that neutralize R5 primary isolates of human immunodeficiency virus type 1.
-
Immunological and virological mechanisms of vaccine-mediated protection against SIV and HIV.
-
Impact of Simian Immunodeficiency Virus Infection on Chimpanzee Population Dynamics.
-
Impact of ammonium permeases mepA, mepB, and mepC on nitrogen-regulated secondary metabolism in Fusarium fujikuroi.
-
Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota).
-
Importance sampling for the infinite sites model.
-
Imprinting evolution and the price of silence.
-
Improved resolution of major clades within Tuber and taxonomy of species within the Tuber gibbosum complex.
-
In it for the long haul: evolutionary consequences of persistent endosymbiosis.
-
Incoherent phylogeographic inference.
-
Incongruence between genetic and morphological diversity in Microcebus griseorufus of Beza Mahafaly.
-
Incongruence between primary sequence data and the distribution of a mitochondrial atp1 group II intron among ferns and horsetails
-
Incorporation of a horizontally transferred gene into an operon during cnidarian evolution.
-
Increased diversification rates follow shifts to bisexuality in liverworts.
-
Increased predominance of HIV-1 CRF01_AE and its recombinants in the Philippines.
-
Increased replication of non-syncytium-inducing HIV type 1 isolates in monocyte-derived macrophages is linked to advanced disease in infected children.
-
Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae.
-
Independent contrasts succeed where ancestor reconstruction fails in a known bacteriophage phylogeny.
-
Infection of monkeys by simian-human immunodeficiency viruses with transmitted/founder clade C HIV-1 envelopes.
-
Infectious disease, behavioural flexibility and the evolution of culture in primates.
-
Inference of the HIV-1 VRC01 Antibody Lineage Unmutated Common Ancestor Reveals Alternative Pathways to Overcome a Key Glycan Barrier.
-
Influence of M. tuberculosis lineage variability within a clinical trial for pulmonary tuberculosis.
-
Infraspecific diversification of the star cloak fern (Notholaena standleyi) in the deserts of the United States and Mexico
-
Initial antibodies binding to HIV-1 gp41 in acutely infected subjects are polyreactive and highly mutated.
-
Inner ear evolution in primates through the Cenozoic: implications for the evolution of hearing.
-
Insensitivity of Diverse and Temporally Variable Particle-Associated Microbial Communities to Bulk Seawater Environmental Parameters.
-
Insights from macroevolutionary modelling and ancestral state reconstruction into the radiation and historical dietary ecology of Lemuriformes (Primates, Mammalia).
-
Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).
-
Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology.
-
Integrating statistical genetic and geospatial methods brings new power to phylogeography.
-
Integration of Contact Tracing and Phylogenetics in an Investigation of Acute HIV Infection.
-
Integrative approaches to the study of primate infectious disease: implications for biodiversity conservation and global health.
-
Interaction type influences ecological network structure more than local abiotic conditions: evidence from endophytic and endolichenic fungi at a continental scale.
-
Interactions between gut microbiota and metabolites modulate cytokine network imbalances in women with unexplained miscarriage.
-
Internal carotid arterial canal size and scaling in Euarchonta: Re-assessing implications for arterial patency and phylogenetic relationships in early fossil primates.
-
Interspecific scaling patterns of talar articular surfaces within primates and their closest living relatives.
-
Intraspecific phylogenetic congruence among multiple symbiont genomes.
-
Intraspecific variation in symbiont genomes: bottlenecks and the aphid-buchnera association.
-
Introduced Species, Disease Ecology, and Biodiversity-Disease Relationships.
-
Invertebrate biomechanics.
-
Investigating deep phylogenetic relationships among cyanobacteria and plastids by small subunit rRNA sequence analysis.
-
Is congruence between data partitions a reliable predictor of phylogenetic accuracy? Empirically testing an iterative procedure for choosing among phylogenetic methods.
-
Isolates of Cryptococcus neoformans from infected animals reveal genetic exchange in unisexual, alpha mating type populations.
-
Isolation and characterization of a novel Helicobacter species, Helicobacter jaachi sp. nov., from common marmosets (Callithrix jaachus).
-
Isolation of novel EGFR-specific VHH domains.
-
Jaw muscles of New World squirrels.
-
Jaw-muscle electromyography during chewing in Belanger's treeshrews (Tupaia belangeri).
-
KIR genotypic diversity can track ancestries in heterogeneous populations: a potential confounder for disease association studies.
-
Kinesin proteins: a phylum of motors for microtubule-based motility.
-
Known mutator alleles do not markedly increase mutation rate in clinical Saccharomyces cerevisiae strains.
-
Landscape position influences microbial composition and function via redistribution of soil water across a watershed.
-
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits.
-
Leptotrichia sanguinegens sp. nov., a new agent of postpartum and neonatal bacteremia.
-
Leveraging Phylogenetics to Understand HIV Transmission and Partner Notification Networks.
-
Levers and linkages: mechanical trade-offs in a power-amplified system.
-
Life history profiles for 27 strepsirrhine primate taxa generated using captive data from the Duke Lemur Center.
-
Lineage-specific expansions provide genomic complexity among sea urchin GTPases.
-
Linking patterns of net community production and marine microbial community structure in the western North Atlantic.
-
Local adaptation and species segregation in two mussel (Mytilus edulis x Mytilus trossulus) hybrid zones.
-
Local habitat, not phylogenetic relatedness, predicts gut microbiota better within folivorous than frugivorous lemur lineages.
-
Local mobile gene pools rapidly cross species boundaries to create endemicity within global Vibrio cholerae populations.
-
Longitudinal urinary microbiome characteristics in women with urgency urinary incontinence undergoing sacral neuromodulation.
-
Low frequency of paleoviral infiltration across the avian phylogeny.
-
Low genetic variation and no detectable population structure in aspergillus fumigatus compared to closely related Neosartorya species.
-
Low-copy nuclear sequence data confirm complex patterns of farina evolution in notholaenid ferns (Pteridaceae)
-
Lower molar shape and size in prosimian and platyrrhine primates.
-
LvGroucho and nuclear beta-catenin functionally compete for Tcf binding to influence activation of the endomesoderm gene regulatory network in the sea urchin embryo.
-
LvNumb works synergistically with Notch signaling to specify non-skeletal mesoderm cells in the sea urchin embryo.
-
LvTbx2/3, a T-box Family Transcription Factor Involved in Formation of the Oral/Aboral Axis of the Sea Urchin Embryo
-
Lymph node metastases develop through a wider evolutionary bottleneck than distant metastases.
-
Macroevolution of Specificity in Cyanolichens of the Genus Peltigera Section Polydactylon (Lecanoromycetes, Ascomycota).
-
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote.
-
Major clades of Agaricales: a multilocus phylogenetic overview.
-
Major fungal lineages are derived from lichen symbiotic ancestors.
-
Malassezia fungi are specialized to live on skin and associated with dandruff, eczema, and other skin diseases.
-
Male tolerance and male-male bonds in a multilevel primate society.
-
Mammalian intestinal allometry, phylogeny, trophic level and climate.
-
Many globally isolated AD hybrid strains of Cryptococcus neoformans originated in Africa.
-
Mapping human genetic diversity in Asia.
-
Mapping of ionomic traits in Mimulus guttatus reveals Mo and Cd QTLs that colocalize with MOT1 homologues.
-
Mapping the Structural Determinants Required for AAVrh.10 Transport across the Blood-Brain Barrier.
-
Megaphages infect Prevotella and variants are widespread in gut microbiomes.
-
Membranomyces species are common ectomycorrhizal symbionts in Northern Hemisphere forests
-
Metabarcoding of eukaryotic parasite communities describes diverse parasite assemblages spanning the primate phylogeny.
-
Metapopulation structure of Vibrionaceae among coastal marine invertebrates.
-
Microbe Profile: Cryptococcus neoformans species complex.
-
Microbiome reduction and endosymbiont gain from a switch in sea urchin life history.
-
Mining the antibodyome for HIV-1-neutralizing antibodies with next-generation sequencing and phylogenetic pairing of heavy/light chains.
-
Mitochondrial FtsZ in a chromophyte alga
-
Mitochondrial gene rearrangements confirm the parallel evolution of the crab-like form.
-
Modeling the evolution of regulatory elements by simultaneous detection and alignment with phylogenetic pair HMMs.
-
Modularity and rates of evolutionary change in a power-amplified prey capture system.
-
Molecular Biology and Evolution of Cancer: From Discovery to Action.
-
Molecular Clocks without Rocks: New Solutions for Old Problems.
-
Molecular Detection and Typing of Pathogenic Leptospira in Febrile Patients and Phylogenetic Comparison with Leptospira Detected among Animals in Tanzania.
-
Molecular and clinical epidemiology of carbapenem-resistant Enterobacterales in the USA (CRACKLE-2): a prospective cohort study.
-
Molecular and functional characterization of a novel sodium channel TipE-like auxiliary subunit from the American cockroach Periplaneta americana.
-
Molecular and genetic evidence for a tetrapolar mating system in the basidiomycetous yeast Kwoniella mangrovensis and two novel sibling species.
-
Molecular basis of a novel adaptation to hypoxic-hypercapnia in a strictly fossorial mole.
-
Molecular biology as a tool for taxonomy.
-
Molecular characterization of DSC1 orthologs in invertebrate species.
-
Molecular characterization of a highly divergent HIV type 1 isolate obtained early in the AIDS epidemic from the Democratic Republic of Congo.
-
Molecular characterization of mucosal adherent bacteria and associations with colorectal adenomas.
-
Molecular characterization of nontuberculous mycobacteria isolated from human cases of disseminated disease in the USA, Thailand, Malawi, and Tanzania.
-
Molecular characterization of the spatial diversity and novel lineages of mycoplankton in Hawaiian coastal waters.
-
Molecular cloning and analysis of functional envelope genes from human immunodeficiency virus type 1 sequence subtypes A through G. The WHO and NIAID Networks for HIV Isolation and Characterization.
-
Molecular cloning and characterization of a novel histone deacetylase HDAC10.
-
Molecular cloning and sequence analysis of a cDNA coding for the mouse alpha-like embryonic globin chain x.
-
Molecular cloning of rainbow trout (Oncorhynchus mykiss) eggshell zona radiata protein complementary DNA: mRNA expression in 17beta-estradiol- and nonylphenol-treated fish.
-
Molecular cloning of the first metazoan beta-1,3 glucanase from eggs of the sea urchin Strongylocentrotus purpuratus.
-
Molecular detection and analysis of spotted fever group Rickettsia in patients with fever and rash at a tertiary care centre in Tamil Nadu, India.
-
Molecular ecology and natural history of simian foamy virus infection in wild-living chimpanzees.
-
Molecular epidemiologic evaluation of endocarditis due to Oerskovia turbata and CDC group A-3 associated with contaminated homograft valves.
-
Molecular epidemiology of human immunodeficiency virus type 1 transmission in a heterosexual cohort of discordant couples in Zambia.
-
Molecular evolution of X-linked accessory gland proteins in Drosophila pseudoobscura.
-
Molecular evolution of a Drosophila homolog of human BRCA2.
-
Molecular evolution of the junctophilin gene family.
-
Molecular evolutionary and structural analysis of the cytosolic DNA sensor cGAS and STING.
-
Molecular evolutionary characterization of a V1R subfamily unique to strepsirrhine primates.
-
Molecular evolutionary dynamics of cytochrome b in strepsirrhine primates: the phylogenetic significance of third-position transversions.
-
Molecular insights into the phylogeny and subgeneric classification of Frullania Raddi (Frullaniaceae, Porellales).
-
Molecular phylogenetic analysis of the Papionina using concatenation and species tree methods.
-
Molecular phylogenetic evidence for the independent evolutionary origin of an arthropod compound eye.
-
Molecular phylogenetic study at the generic boundary between the lichen-forming fungi Caloplaca and Xanthoria (Ascomycota, Teloschistaceae).
-
Molecular phylogeny and systematics of Polyblastia (Verrucariaceae, Eurotiomycetes) and allied genera.
-
Molecular phylogeny of Heteroplacidium, Placidium, and related catapyrenioid genera (Verrucariaceae, lichen-forming Ascomycota).
-
Molecular phylogeny of naidid worms (Annelida: Clitellata) based on cytochrome oxidase I.
-
Molecular phylogeny of the Blastocladiomycota (Fungi) based on nuclear ribosomal DNA.
-
Molecular phylogeny of the Entomophthoromycota:
-
Molecular phylogeny of the Mycobacterium avium complex demonstrates clinically meaningful divisions.
-
Molecular phylogeny of the kinesin family of microtubule motor proteins.
-
Molecular phylogeny, biogeography and speciation of the mushroom species Pleurotus cystidiosus and allied taxa.
-
Molecular phylogeography and cryptic speciation in the mosses, Mielichhoferia elongata and M. mielichhoferiana (Bryaceae).
-
Molecular surveillance of HIV-1 field strains in Nigeria in preparation for vaccine trials.
-
Morphological and genomic characterization of Filobasidiella depauperata: a homothallic sibling species of the pathogenic cryptococcus species complex.
-
Motor proteins 1: kinesins.
-
Motor proteins. 1: kinesins.
-
Multi-ancestry sleep-by-SNP interaction analysis in 126,926 individuals reveals lipid loci stratified by sleep duration.
-
Multilocus coalescent analyses reveal the demographic history and speciation patterns of mouse lemur sister species.
-
Multilocus phylogenetic and geospatial analyses illuminate diversification patterns and the biogeographic history of Malagasy endemic plated lizards (Gerrhosauridae: Zonosaurinae).
-
Multilocus sequence typing reveals three genetic subpopulations of Cryptococcus neoformans var. grubii (serotype A), including a unique population in Botswana.
-
Multilocus test for introgression between the cactophilic species Drosophila mojavensis and Drosophila arizonae.
-
Multiple Pathways to Homothallism in Closely Related Yeast Lineages in the Basidiomycota.
-
Multiple activities of the plant pathogen type III effector proteins WtsE and AvrE require WxxxE motifs.
-
Multiple colonisations of the western Indian Ocean by Pteropus fruit bats (Megachiroptera: Pteropodidae): the furthest islands were colonised first.
-
Multiple facets of Arabidopsis seedling development require indole-3-butyric acid-derived auxin.
-
Multiple gene genealogies reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans.
-
Multiple horizontal gene transfers of ammonium transporters/ammonia permeases from prokaryotes to eukaryotes: toward a new functional and evolutionary classification.
-
Multiple hybrid formation in natural populations: concerted evolution of the internal transcribed spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae).
-
Multiple nuclear loci reveal patterns of incomplete lineage sorting and complex species history within western mouse lemurs (Microcebus).
-
Multiple origins of high reciprocal symbiotic specificity at an intercontinental spatial scale among gelatinous lichens (Collemataceae, Lecanoromycetes).
-
Multiple origins of hybrid strains of Cryptococcus neoformans with serotype AD.
-
Multiplexed shotgun genotyping resolves species relationships within the North American genus Penstemon.
-
Multiregional Radiogenomic Assessment of Prostate Microenvironments with Multiparametric MR Imaging and DNA Whole-Exome Sequencing of Prostate Glands with Adenocarcinoma.
-
Murine noroviruses comprising a single genogroup exhibit biological diversity despite limited sequence divergence.
-
Mutations that confer resistance to broadly-neutralizing antibodies define HIV-1 variants of transmitting mothers from that of non-transmitting mothers.
-
Mutualism or parasitism? Using a phylogenetic approach to characterize the oxpecker-ungulate relationship.
-
Mycobacterium tuberculosis Beijing family: analysis of the epidemiological and clinical factors associated with an emerging lineage in the urban area of Milan.
-
Mycoplasma-related endobacteria within Mortierellomycotina fungi: diversity, distribution and functional insights into their lifestyle.
-
N6-methyladenosine alters RNA structure to regulate binding of a low-complexity protein.
-
Natural hybridization between genera that diverged from each other approximately 60 million years ago
-
Natural infection of a household pet red-capped mangabey (Cercocebus torquatus torquatus) with a new simian immunodeficiency virus.
-
Natural selection on a carbon cycling trait drives ecosystem engineering by Sphagnum
(peat moss).
-
Natural variation in HIV-1 protease, Gag p7 and p6, and protease cleavage sites within gag/pol polyproteins: amino acid substitutions in the absence of protease inhibitors in mothers and children infected by human immunodeficiency virus type 1.
-
Nature of the 3'-terminal sequences of the plus and minus strands of the S1 gene of reovirus serotypes 1, 2 and 3.
-
NeXML: rich, extensible, and verifiable representation of comparative data and metadata.
-
Near full-length clones and reference sequences for subtype C isolates of HIV type 1 from three different continents.
-
Nearshore fish (Pholis gunnellus) persists across the North Atlantic through multiple glacial episodes.
-
Neuronal cell shape and neurite initiation are regulated by the Ndr kinase SAX-1, a member of the Orb6/COT-1/warts serine/threonine kinase family.
-
Neutral evolution of the nonbinding region of the anthocyanin regulatory gene Ipmyb1 in Ipomoea.
-
Neutralization-sensitive R5-tropic simian-human immunodeficiency virus SHIV-2873Nip, which carries env isolated from an infant with a recent HIV clade C infection.
-
New Genetic Approaches to AD: Lessons from APOE-TOMM40 Phylogenetics.
-
New North American truffles (Tuber spp.) and their ectomycorrhizal associations.
-
New Paleocene skeletons and the relationship of plesiadapiforms to crown-clade primates.
-
New adapiform primate of Old World affinities from the Devil's Graveyard Formation of Texas.
-
New craniodental material of Pronothodectes gaoi Fox (Mammalia, "Plesiadapiformes") and relationships among members of Plesiadapidae.
-
New early eocene anaptomorphine primate (Omomyidae) from the Washakie Basin, Wyoming, with comments on the phylogeny and paleobiology of anaptomorphines.
-
New estimates of blood flow rates in the vertebral artery of euarchontans and their implications for encephalic blood flow scaling: A response to Seymour and Snelling (2018).
-
New fossils of the oldest North American euprimate Teilhardina brandti (Omomyidae) from the paleocene-eocene thermal maximum.
-
New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes.
-
New insights into the phylogenetic distribution and evolutionary origins of the septins.
-
New nitrogen-fixing microorganisms detected in oligotrophic oceans by amplification of Nitrogenase (nifH) genes.
-
New perspectives on anthropoid origins.
-
New platyrrhine monkeys from the Solimões Formation (late Miocene, Acre State, Brazil).
-
New postcrania of Deccanolestes from the Late Cretaceous of India and their bearing on the evolutionary and biogeographic history of euarchontan mammals.
-
New primate first metatarsals from the Paleogene of Egypt and the origin of the anthropoid big toe.
-
New simian immunodeficiency virus infecting De Brazza's monkeys (Cercopithecus neglectus): evidence for a cercopithecus monkey virus clade.
-
New species and distribution records for Clavulina (Cantharellales, Basidiomycota) from the Guiana Shield, with a key to the lowland neotropical taxa.
-
New species of Clavulina (Cantharellales, Basidiomycota) with resupinate and effused basidiomata from the Guiana Shield.
-
Next generation multilocus sequence typing (NGMLST) and the analytical software program MLSTEZ enable efficient, cost-effective, high-throughput, multilocus sequencing typing.
-
Next-generation genotyping of hypervariable loci in many individuals of a non-model species: technical and theoretical implications.
-
Next‐generation polyploid phylogenetics: Rapid resolution of hybrid polyploid complexes using PacBio single‐molecule sequencing
-
Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients.
-
Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific.
-
Night and day: the comparative study of strepsirrhine primates reveals socioecological and phylogenetic patterns in olfactory signals.
-
North American origin and recent European establishments of the amphi-Atlantic peat moss Sphagnum angermanicum.
-
Notes on Agaricus section Duploannulati using molecular and morphological data.
-
Notochordal Signals Establish Phylogenetic Identity of the Teleost Spine.
-
Novel Insights into Chromosome Evolution in Birds, Archosaurs, and Reptiles.
-
Novel circular DNA viruses in stool samples of wild-living chimpanzees.
-
Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian Ocean.
-
Novel retrotransposed imprinted locus identified at human 6p25.
-
Novel taxa of thermally dimorphic systemic pathogens in the Ajellomycetaceae (Onygenales).
-
Nuciruptor rubricae, a new pitheciin seed predator from the Miocene of Colombia.
-
Nuclear ribosomal DNA sequence variation and evolution of spotted marsh-orchids (Dactylorhiza maculata group)
-
Obtaining mtDNA genomes from next-generation transcriptome sequencing: a case study on the basal Passerida (Aves: Passeriformes) phylogeny.
-
Oldest known euarchontan tarsals and affinities of Paleocene Purgatorius to Primates.
-
Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida.
-
Olfactory fossa of Tremacebus harringtoni (platyrrhini, early Miocene, Sacanana, Argentina): implications for activity pattern.
-
Once more unto the breach, dear friends: Resolving the origins and relationships of the Pellaea wrightiana hybrid complex.
-
One hundred and seventeen clades of euagarics.
-
One nutritional symbiosis begat another: phylogenetic evidence that the ant tribe Camponotini acquired Blochmannia by tending sap-feeding insects.
-
One species or at least eight? Delimitation and distribution of Frullania tamarisci (L.) Dumort. s. l. (Jungermanniopsida, Porellales) inferred from nuclear and chloroplast DNA markers.
-
One thousand plant transcriptomes and the phylogenomics of green plants.
-
Ongoing electrical activity of superior cervical ganglion cells in mammals of different size.
-
Ontogenetic Differences in Dietary Fat Influence Microbiota Assembly in the Zebrafish Gut.
-
Ontogenetic and phylogenetic transformations of the ear ossicles in marsupial mammals.
-
Open Questions: We don't really know anything, do we? Open questions in sensory biology.
-
Oral microbiome diversity in chimpanzees from Gombe National Park.
-
Organellar phylogenomics of an emerging model system: Sphagnum (peatmoss).
-
Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution.
-
Organization and evolutionary trajectory of the mating type (MAT) locus in dermatophyte and dimorphic fungal pathogens.
-
Origin and evolution of HIV-1 in breast milk determined by single-genome amplification and sequencing.
-
Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes.
-
Origins and evolution of AIDS viruses.
-
Origins and evolution of AIDS viruses: estimating the time-scale.
-
Origins, genetic structure, and systematics of the narrow endemic peatmosses (Sphagnum): S. guwassanense and S. triseriporum (Sphagnaceae).
-
Outbreak of Invasive Wound Mucormycosis in a Burn Unit Due to Multiple Strains of Mucor circinelloides f. circinelloides Resolved by Whole-Genome Sequencing.
-
Overcoming deep roots, fast rates, and short internodes to resolve the ancient rapid radiation of eupolypod II ferns.
-
Overexpression of a Brassica rapa NGATHA gene in Arabidopsis thaliana negatively affects cell proliferation during lateral organ and root growth.
-
Overview of FEED, the feeding experiments end-user database.
-
Oxygen affinity and amino acid sequence of myoglobins from endothermic and ectothermic fish.
-
PCR-restriction fragment length polymorphism (RFLP) analyses reveal both extensive clonality and local genetic differences in Candida albicans.
-
PR48, a novel regulatory subunit of protein phosphatase 2A, interacts with Cdc6 and modulates DNA replication in human cells.
-
PSGR, a novel prostate-specific gene with homology to a G protein-coupled receptor, is overexpressed in prostate cancer.
-
Paleo-demography of the Drosophila melanogaster subgroup: application of the maximum likelihood method.
-
Parallel acceleration of evolutionary rates in symbiont genes underlying host nutrition.
-
Parallel evolution of drug resistance in HIV: failure of nonsynonymous/synonymous substitution rate ratio to detect selection.
-
Parallel molecular evolution of deletions and nonsense mutations in bacteriophage T7.
-
Paralogous VDRs in teleosts:transition of nuclear receptor function
-
Parasite-mediated evolution of the functional part of the MHC in primates.
-
Parasites and the evolutionary diversification of primate clades.
-
Partial shotgun sequencing of the Boechera stricta genome reveals extensive microsynteny and promoter conservation with Arabidopsis.
-
Parvimico materdei gen. et sp. nov.: A new platyrrhine from the Early Miocene of the Amazon Basin, Peru.
-
Patterns of astragalar fibular facet orientation in extant and fossil primates and their evolutionary implications.
-
Patterns of gut bacterial colonization in three primate species.
-
Patterns of host specificity and transmission among parasites of wild primates.
-
Patterns of nucleotide diversity in two species of Mimulus are affected by mating system and asymmetric introgression.
-
Patterns of nucleotide variation and reproductive isolation between a Mimulus allotetraploid and its progenitor species.
-
Patterns of variation within self-incompatibility loci.
-
Peatmoss (Sphagnum) diversification associated with Miocene Northern Hemisphere climatic cooling?
-
Pedigree-based and phylogenetic methods support surprising patterns of mutation rate and spectrum in the gray mouse lemur.
-
Peering ahead (cautiously).
-
Pentavalent HIV-1 vaccine protects against simian-human immunodeficiency virus challenge.
-
Persistence of multiple maternal genotypes of human immunodeficiency virus type I in infants infected by vertical transmission.
-
Perspectives from the Avian Phylogenomics Project: Questions that Can Be Answered with Sequencing All Genomes of a Vertebrate Class.
-
Pervasive Effects of Aging on Gene Expression in Wild Wolves.
-
Phenotypic and genotypic characteristics of human immunodeficiency virus type 1 from patients with AIDS in northern Thailand.
-
Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome.
-
Phycomyces MADB interacts with MADA to form the primary photoreceptor complex for fungal phototropism.
-
PhyloOncology: Understanding cancer through phylogenetic analysis.
-
Phylodynamics of HIV-1 in lymphoid and non-lymphoid tissues reveals a central role for the thymus in emergence of CXCR4-using quasispecies.
-
Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota).
-
Phylogenetic analyses of eurotiomycetous endophytes reveal their close affinities to Chaetothyriales, Eurotiales, and a new order - Phaeomoniellales.
-
Phylogenetic analyses of morphological evolution in the gametophyte and sporophyte generations of the moss order Hookeriales (Bryopsida).
-
Phylogenetic analyses suggest reverse splicing spread of group I introns in fungal ribosomal DNA.
-
Phylogenetic analysis of anthropoid relationships.
-
Phylogenetic analysis of phenotypically characterized Cryptococcus laurentii isolates reveals high frequency of cryptic species.
-
Phylogenetic analysis of protease and transmembrane region of HIV type 1 group O.
-
Phylogenetic analysis of the ecology and evolution of mammalian sleep.
-
Phylogenetic analysis of vertebrate lactate dehydrogenase (LDH) multigene families.
-
Phylogenetic analysis of viridans group streptococci causing endocarditis.
-
Phylogenetic and Phylogenomic Definition of Rhizopus Species.
-
Phylogenetic and biogeographic relationships of eastern Asian and eastern North American disjunct Suillus species (fungi) as inferred from nuclear ribosomal RNA ITS sequences.
-
Phylogenetic classification of the world's tropical forests.
-
Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: a case study of the Lecanoromycetes (Ascomycota).
-
Phylogenetic comparisons implicate sex hormone-binding globulin in "masculinization" of the female spotted hyena (Crocuta crocuta).
-
Phylogenetic conservatism of mycoparasitism and its contribution to pathogen antagonism.
-
Phylogenetic distribution of the bacteriocin repertoire of lactic acid bacteria species associated with artisanal cheese.
-
Phylogenetic diversity of 200+ isolates of the ectomycorrhizal fungus Cenococcum geophilum associated with Populus trichocarpa soils in the Pacific Northwest, USA and comparison to globally distributed representatives.
-
Phylogenetic evidence for the transfer of Pseudomonas cocovenenans (van Damme et al. 1960) to the genus Burkholderia as Burkholderia cocovenenans (van Damme et al. 1960) comb. nov.
-
Phylogenetic evidence of a rapid radiation of pleurocarpous mosses (Bryophyta).
-
Phylogenetic footprint analysis of IGF2 in extant mammals.
-
Phylogenetic host specificity and understanding parasite sharing in primates.
-
Phylogenetic implications of the superfast myosin in extraocular muscles.
-
Phylogenetic placement of community members of human colonic biota.
-
Phylogenetic rate shifts in feeding time during the evolution of Homo.
-
Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes).
-
Phylogenetic relationships in the mushroom genus Coprinus and dark-spored allies based on sequence data from the nuclear gene coding for the large ribosomal subunit RNA: divergent domains, outgroups, and monophyly.
-
Phylogenetic relationships of Rhizoctonia fungi within the Cantharellales.
-
Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences.
-
Phylogenetic relationships of the liverworts (Hepaticae), a basal embryophyte lineage, inferred from nucleotide sequence data of the chloroplast gene rbcL.
-
Phylogenetic relationships, host affinity, and geographic structure of boreal and arctic endophytes from three major plant lineages.
-
Phylogenetic relationships, morphological incongruence, and geographic speciation in the fontinalaceae (Bryophyta).
-
Phylogenetic simulation of promoter evolution: estimation and modeling of binding site turnover events and assessment of their impact on alignment tools.
-
Phylogenetic structure in the Sphagnum recurvum complex (Bryophyta) in relation to taxonomy and geography.
-
Phylogenetic study of Catapyrenium s. str. (Verrucariaceae, lichen-forming Ascomycota) and related genus Placidiopsis.
-
Phylogenetic targeting of research effort in evolutionary biology.
-
Phylogenetic utility of indels within ribosomal DNA and beta-tubulin sequences from fungi in the Rhizoctonia solani species complex.
-
Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov.
-
Phylogenomic analyses data of the avian phylogenomics project.
-
Phylogenomic analyses highlight innovation and introgression in the continental radiations of Fagaceae across the Northern Hemisphere.
-
Phylogenomic analysis of non-ribosomal peptide synthetases in the genus Aspergillus.
-
Phylogenomic inferences from reference-mapped and de novo assembled short-read sequence data using RADseq sequencing of California white oaks (Quercus section Quercus).
-
Phylogenomics reveals a complex evolutionary history of lobed-leaf white oaks in western North America.
-
Phylogenomics reveals convergent evolution of red-violet coloration in land plants and the origins of the anthocyanin biosynthetic pathway.
-
Phylogeny and biogeography of East Asian evergreen oaks (Quercus section Cyclobalanopsis; Fagaceae): Insights into the Cenozoic history of evergreen broad-leaved forests in subtropical Asia.
-
Phylogeny and biogeography of the American live oaks (Quercus subsection Virentes): a genomic and population genetics approach.
-
Phylogeny and evolution of Malagasy plated lizards.
-
Phylogeny and evolution of aldehyde dehydrogenase-homologous folate enzymes.
-
Phylogeny and evolution of medical species of Candida and related taxa: a multigenic analysis.
-
Phylogeny and morphological evolution of the amblystegiaceae (Bryopsida).
-
Phylogeny and phenotypic characterization of pathogenic Cryptococcus species and closely related saprobic taxa in the Tremellales.
-
Phylogeny and taxonomy of the family Arthrodermataceae (dermatophytes) using sequence analysis of the ribosomal ITS region.
-
Phylogeny of Toll-like receptor signaling: adapting the innate response.
-
Phylogeny of Wolbachia pipientis based on gltA, groEL and ftsZ gene sequences: clustering of arthropod and nematode symbionts in the F supergroup, and evidence for further diversity in the Wolbachia tree.
-
Phylogeny of extant and extinct Juglandaceae inferred from the integration of molecular and morphological data sets
-
Phylogeny of lichen- and non-lichen-forming omphalinoid mushrooms and the utility of testing for combinability among multiple data sets.
-
Phylogeny of the Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits.
-
Phylogeny of the Whipple's-disease-associated bacterium.
-
Phylogeny of the leafy liverwort Ptilidium: cryptic speciation and shared haplotypes between the Northern and Southern Hemispheres.
-
Phylogeny, biogeography, and processes of molecular differentiation in Quercus subgenus Quercus (Fagaceae).
-
Phylogeny, scaling, and the generation of extreme forces in trap-jaw ants.
-
Phylogeographic structure and cryptic speciation in the trans-Antarctic moss Pyrrhobryum mnioides.
-
Phylogeography and historical ecology of the North Atlantic intertidal.
-
Phylogeography of a Morphologically Cryptic Golden Mole Assemblage from South-Eastern Africa.
-
Phylogeography of the Solanaceae-infecting Basidiomycota fungus Rhizoctonia solani AG-3 based on sequence analysis of two nuclear DNA loci.
-
Phylogeography of the arid-adapted Malagasy bullfrog, Laliostoma labrosum, influenced by past connectivity and habitat stability.
-
Phylogeography's past, present, and future: 10 years after Avise, 2000.
-
Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient.
-
Phylotranscriptomic analysis of the origin and early diversification of land plants.
-
Plant evolutionary genomics.
-
Plant sex and the evolution of plant defenses against herbivores.
-
Platypus and echidna genomes reveal mammalian biology and evolution.
-
Pleiotropic roles of the Msi1-like protein Msl1 in Cryptococcus neoformans.
-
Podocan, a novel small leucine-rich repeat protein expressed in the sclerotic glomerular lesion of experimental HIV-associated nephropathy.
-
Polymorphism at the ribosomal DNA spacers and its relation to breeding structure of the widespread mushroom Schizophyllum commune.
-
Polymorphisms and evolutionary history of retrotransposon insertions in rice promoters.
-
Polyphasic characterization of four soil-derived phenanthrene-degrading Acidovorax strains and proposal of Acidovorax carolinensis sp. nov.
-
Polyporales genomes reveal the genetic architecture underlying tetrapolar and bipolar mating systems.
-
Poor Immunogenicity, Not Vaccine Strain Egg Adaptation, May Explain the Low H3N2 Influenza Vaccine Effectiveness in 2012-2013.
-
Population genetic analyses reveal the African origin and strain variation of Cryptococcus neoformans var. grubii.
-
Population genetic and phylogenetic evidence for positive selection on regulatory mutations at the factor VII locus in humans.
-
Population genetic differentiation of the hydrothermal vent crab Austinograea alayseae (Crustacea: Bythograeidae) in the Southwest Pacific Ocean.
-
Population genetics of a polyploid: is there hybridization between lineages of Hyla versicolor?
-
Population genetics of a trochid gastropod broadens picture of Caribbean Sea connectivity.
-
Population-genomic inference of the strength and timing of selection against gene flow.
-
Positive selection driving diversification in plant secondary metabolism.
-
Positive selection on MMP3 regulation has shaped heart disease risk.
-
Positive selection on a human-specific transcription factor binding site regulating IL4 expression.
-
Post-Austronesian migrational wave of West Polynesians to Micronesia.
-
Postcrania of the most primitive euprimate and implications for primate origins.
-
Postepizootic persistence of Venezuelan equine encephalitis virus, Venezuela.
-
Postnatally-transmitted HIV-1 Envelope variants have similar neutralization-sensitivity and function to that of nontransmitted breast milk variants.
-
Potential sources of the 1995 Venezuelan equine encephalitis subtype IC epidemic.
-
Precise mapping of recombination breakpoints suggests a common parent of two BC recombinant HIV type 1 strains circulating in China.
-
Predictability and irreversibility of genetic changes associated with flower color evolution in Penstemon barbatus.
-
Predicting Vibrio cholerae Infection and Disease Severity Using Metagenomics in a Prospective Cohort Study.
-
Predicting primate-parasite associations using exponential random graph models.
-
Prediction of HIV Transmission Cluster Growth With Statewide Surveillance Data.
-
Preliminary notes on a newly discovered skull of the extinct Hispaniolian monkey Antillothrix from Hispaniola and the origin of the Greater Antillean monkeys
-
Presence of diverse human immunodeficiency virus type 1 viral variants in Cameroon.
-
Prevalence of clinical isolates of Cryptococcus gattii serotype C among patients with AIDS in Sub-Saharan Africa.
-
Primate extinction risk and historical patterns of speciation and extinction in relation to body mass.
-
Primate origins, human origins, and the end of higher taxa.
-
Primate phageomes are structured by superhost phylogeny and environment.
-
Probabilities of Unranked and Ranked Anomaly Zones under Birth-Death Models.
-
Prochlorococcus: approved for export.
-
Progressive island colonization and ancient origin of Hawaiian Metrosideros (Myrtaceae).
-
Prolonged Adaptive Evolution of a Defensive Gene in the Solanaceae.
-
Prophage Hunter: an integrative hunting tool for active prophages.
-
Proteases of Dermatophagoides pteronyssinus.
-
Protection from nitrosative stress by yeast flavohemoglobin.
-
Protein tyrosine and serine-threonine phosphatases in the sea urchin, Strongylocentrotus purpuratus: identification and potential functions.
-
Pseudomonas syringae: what it takes to be a pathogen.
-
Quantification of homoplasy for nucleotide transitions and transversions and a reexamination of assumptions in weighted phylogenetic analysis.
-
Quantification of the position and depth of the flexor hallucis longus groove in euarchontans, with implications for the evolution of primate positional behavior.
-
Quantitating the multiplicity of infection with human immunodeficiency virus type 1 subtype C reveals a non-poisson distribution of transmitted variants.
-
Quantitative uniqueness of human brain evolution revealed through phylogenetic comparative analysis.
-
R2R3-MYB genes control petal pigmentation patterning in Clarkia gracilis ssp. sonomensis (Onagraceae).
-
RNAi function, diversity, and loss in the fungal kingdom.
-
RNase 1 genes from the family Sciuridae define a novel rodent ribonuclease cluster.
-
RTK and TGF-beta signaling pathways genes in the sea urchin genome.
-
RTP family members induce functional expression of mammalian odorant receptors.
-
Range change evolution of peat mosses (Sphagnum) within and between climate zones.
-
Range size heritability and diversification patterns in the liverwort genus Radula.
-
Ranging patterns and parasitism in primates.
-
Rapamycin exerts antifungal activity in vitro and in vivo against Mucor circinelloides via FKBP12-dependent inhibition of Tor.
-
Rapid changes in the gut microbiome during human evolution.
-
Rapid evolution in plant chitinases: molecular targets of selection in plant-pathogen coevolution.
-
Rapid evolution of a pollen-specific oleosin-like gene family from Arabidopsis thaliana and closely related species.
-
Rapid evolutionary innovation during an Archaean genetic expansion.
-
Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species.
-
Rare microbial taxa emerge when communities collide: freshwater and marine microbiome responses to experimental mixing.
-
Recent divergence, intercontinental dispersal and shared polymorphism are shaping the genetic structure of amphi-Atlantic peatmoss populations.
-
Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection.
-
Recombination and the divergence of hybridizing species.
-
Recombination-Aware Phylogenomics Reveals the Structured Genomic Landscape of Hybridizing Cat Species.
-
Reconciling Conflicting Phylogenies in the Origin of Sweet Potato and Dispersal to Polynesia.
-
Reconstructing genome evolution in historic samples of the Irish potato famine pathogen.
-
Reconstructing the early evolution of the Fungi using a six-gene phylogeny
-
Recurrent polyploid origins and chloroplast phylogeography in the Arabis holboellii complex (Brassicaceae).
-
Reduced selective constraint in endosymbionts: elevation in radical amino acid replacements occurs genome-wide.
-
Refugial isolation and range expansions drive the genetic structure of Oxyria sinensis (Polygonaceae) in the Himalaya-Hengduan Mountains.
-
Regulation of plant arginase by wounding, jasmonate, and the phytotoxin coronatine.
-
Relationship between abundance and specific activity of bacterioplankton in open ocean surface waters.
-
Relative position of the Cheirogaleidae in strepsirhine phylogeny: a comparison of morphological and molecular methods and results.
-
Relaxed constraint and evolutionary rate variation between basic helix-loop-helix floral anthocyanin regulators in Ipomoea.
-
Relaxed selection among duplicate floral regulatory genes in Lamiales.
-
Relief index of second mandibular molars is a correlate of diet among prosimian primates and other euarchontan mammals.
-
Remarkable species diversity in Malagasy mouse lemurs (primates, Microcebus).
-
Repeated phenotypic changes highlight molecular targets of convergent evolution.
-
Repeated range expansion and glacial endurance of Potentilla glabra (Rosaceae) in the Qinghai-Tibetan plateau.
-
Reproducibility of Vibrionaceae population structure in coastal bacterioplankton.
-
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes.
-
Resolving Arthropod Phylogeny: Exploring Phylogenetic Signal within 41 kb of Protein-Coding Nuclear Gene Sequence
-
Resource partitioning and sympatric differentiation among closely related bacterioplankton.
-
Response to Comment on "Whole-genome analyses resolve early branches in the tree of life of modern birds".
-
Retrotransposon insertion polymorphisms in six rice genes and their evolutionary history.
-
Review of the systematic status of Sceloporus arenicolus Degenhardt and Jones, 1972 with an estimate of divergence time.
-
Revisiting the distribution of oceanic N2
fixation and estimating diazotrophic contribution to marine production.
-
Revisiting the rDNA sequence diversity of a natural population of the arbuscular mycorrhizal fungus Acaulospora colossica.
-
Rhizobium gone native: unexpected plasmid stability of indigenous Rhizobium leguminosarum.
-
Ribosomal DNA sequence analysis of mucosa-associated bacteria in Crohn's disease.
-
Role of Arf-like proteins (Arl1 and Arl2) of Mucor circinelloides in virulence and antifungal susceptibility.
-
Rudimentary substrates for vocal learning in a suboscine.
-
S-allele sequence diversity in natural populations of Solanum carolinense (Horsenettle).
-
SIRT1 and SIRT3 deacetylate homologous substrates: AceCS1,2 and HMGCS1,2.
-
SIRT4 Is a Lysine Deacylase that Controls Leucine Metabolism and Insulin Secretion.
-
Same-sex mating and the origin of the Vancouver Island Cryptococcus gattii outbreak.
-
Sampling confidence envelopes of phylogenetic trees for combinability testing: a reply to Rodrigo.
-
Scaling of bony canals for encephalic vessels in euarchontans: Implications for the role of the vertebral artery and brain metabolism.
-
Scaling of the mandible in squirrels.
-
Seasonal variation in body mass and locomotor kinetics of the fat-tailed dwarf lemur (Cheirogaleus medius).
-
Seasonal variation of Microcystis in Lake Taihu and its relationships with environmental factors.
-
Selection of HIV Envelope Strains for Standardized Assessments of Vaccine-Elicited Antibody-Dependent Cellular Cytotoxicity-Mediating Antibodies.
-
Selective sweeps and intercontinental migration in the cosmopolitan moss Ceratodon purpureus (Hedw.) Brid.
-
Sequence context of indel mutations and their effect on protein evolution in a bacterial endosymbiont.
-
Sequence heterochrony and the evolution of development.
-
Sequence-based differentiation of strains in the Mycobacterium avium complex.
-
Sequences and phylogenetic analysis of the nef gene from Thai subjects harboring subtype E HIV-1.
-
Sequencing the mouse Y chromosome reveals convergent gene acquisition and amplification on both sex chromosomes.
-
Sequential utilization of hosts from different fly families by genetically distinct, sympatric populations within the Entomophthora muscae species complex.
-
Sexual dimorphism in immunity across animals: a meta-analysis.
-
Sexual dimorphism in primate aerobic capacity: a phylogenetic test.
-
Simulating trait evolution for cross-cultural comparison.
-
Simultaneous Bayesian estimation of alignment and phylogeny under a joint model of protein sequence and structure.
-
Single origin and subsequent diversification of central Andean endemic Umbilicaria species.
-
Single origin of Malagasy Carnivora from an African ancestor.
-
Single-cell RNA-seq supports a developmental hierarchy in human oligodendroglioma.
-
Six reference-quality genomes reveal evolution of bat adaptations.
-
Size and shape dimorphism in great ape mandibles and implications for fossil species recognition.
-
Size-abundance relationships in an Amazonian bird community: implications for the energetic equivalence rule.
-
Slip-sliding away: serial changes and homoplasy in repeat number in the Drosophila yakuba homolog of human cancer susceptibility gene BRCA2.
-
Spatial Genetic Structure of the Abundant and Widespread Peatmoss Sphagnum magellanicum Brid.
-
Spatial pattern of nucleotide polymorphism indicates molecular adaptation in the bryophyte Sphagnum fimbriatum.
-
Species and genotypic diversities and similarities of pathogenic yeasts colonizing women.
-
Species delimitation and biogeography of a southern hemisphere liverwort clade, Frullania subgenus Microfrullania (Frullaniaceae, Marchantiophyta).
-
Species delimitation in lemurs: multiple genetic loci reveal low levels of species diversity in the genus Cheirogaleus.
-
Specific eukaryotic plankton are good predictors of net community production in the Western Antarctic Peninsula.
-
Spectral sensitivity in ray-finned fishes: diversity, ecology and shared descent.
-
Speeding in the slow lane: Phylogenetic comparative analyses reveal that not all human life history traits are exceptional.
-
Sporangiospore size dimorphism is linked to virulence of Mucor circinelloides.
-
Stable isotope analyses reveal previously unknown trophic mode diversity in the Hymenochaetales.
-
Staged induction of HIV-1 glycan-dependent broadly neutralizing antibodies.
-
Statistical methods for studying modularity: a reply to Mitteroecker and Bookstein.
-
Stem members of Platyrrhini are distinct from catarrhines in at least one derived cranial feature.
-
Streamlined Subpopulation, Subtype, and Recombination Analysis of HIV-1 Half-Genome Sequences Generated by High-Throughput Sequencing.
-
Strong fungal specificity and selectivity for algal symbionts in Florida scrub Cladonia lichens.
-
Strong specificity and network modularity at a very fine phylogenetic scale in the lichen genus Peltigera.
-
Structural analysis and detection of biological inositol pyrophosphates reveal that the family of VIP/diphosphoinositol pentakisphosphate kinases are 1/3-kinases.
-
Structural variants can be more informative for disease diagnostics, prognostics and translation than current SNP mapping and exon sequencing.
-
Structure and function of CC-chemokine receptor 5 homologues derived from representative primate species and subspecies of the taxonomic suborders Prosimii and Anthropoidea.
-
Structure, function, and phylogeny of the mating locus in the Rhizopus oryzae complex.
-
Structure-based high-throughput epitope analysis of hexon proteins in B and C species human adenoviruses (HAdVs).
-
Subspecific differentiation of Mycobacterium avium complex strains by automated sequencing of a region of the gene (hsp65) encoding a 65-kilodalton heat shock protein.
-
Substantial multiclass transmitted drug resistance and drug-relevant polymorphisms among treatment-naïve behaviorally HIV-infected youth.
-
Support for a monophyletic Lemuriformes: Overcoming incongruence between data partitions
-
Supporting Spartina: Interdisciplinary perspective shows Spartina as a distinct solid genus.
-
Survey of corticioid fungi in North American pinaceous forests reveals hyperdiversity, underpopulated sequence databases, and species that are potentially ectomycorrhizal.
-
Sutterella wadsworthensis gen. nov., sp. nov., bile-resistant microaerophilic Campylobacter gracilis-like clinical isolates.
-
Sympatric parallel diversification of major oak clades in the Americas and the origins of Mexican species diversity.
-
Systematic Characterization of the OSCA
Family Members in Soybean and Validation of Their Functions in Osmotic Stress.
-
Systematics of the genus Chaetosphaeria and its allied genera: morphological and phylogenetic diversity in north temperate and neotropical taxa.
-
T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life.
-
Taking the first steps towards a standard for reporting on phylogenies: Minimum Information About a Phylogenetic Analysis (MIAPA).
-
Target recognition by the archenteron during sea urchin gastrulation.
-
Techniques for quantifying phytoplankton biodiversity.
-
Tempo of trophic evolution and its impact on mammalian diversification.
-
Temporal profile of replication of human chromosomes.
-
Tenascin-C, tenascin-R and tenascin-X: a family of talented proteins in search of functions.
-
Testing for divergent transmission histories among cultural characters: a study using Bayesian phylogenetic methods and Iranian tribal textile data.
-
Testing morphological concepts of orders of pleurocarpous mosses (Bryophyta) using phylogenetic reconstructions based on TRNL-TRNF and RPS4 sequences.
-
Testing the effects of four urbanization filters on forest plant taxonomic, functional, and phylogenetic diversity.
-
The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen.
-
The Arabidopsis epithiospecifier protein promotes the hydrolysis of glucosinolates to nitriles and influences Trichoplusia ni herbivory.
-
The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits.
-
The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new fellowship in expansion.
-
The Cryptococcus neoformans catalase gene family and its role in antioxidant defense.
-
The Early-Acting Peroxin PEX19 Is Redundantly Encoded, Farnesylated, and Essential for Viability in Arabidopsis thaliana.
-
The Evolution of Sex is Tempered by Costly Hybridization in Boechera (Rock Cress).
-
The GRK4 subfamily of G protein-coupled receptor kinases. Alternative splicing, gene organization, and sequence conservation.
-
The Independent Evolution Method Is Not a Viable Phylogenetic Comparative Method.
-
The MetJ regulon in gammaproteobacteria determined by comparative genomics methods.
-
The Mutation Profile of SARS-CoV-2 Is Primarily Shaped by the Host Antiviral Defense.
-
The Origin and Diversification of Birds.
-
The Pleistocene history of the sheepshead minnow (Cyprinodon variegatus): Non-equilibrium evolutionary dynamics within a diversifying species complex.
-
The Role of Brachyruy (T) During Gastrulations Movement in the Sea Urchin, Lytechinus variegatus
-
The Snail repressor is required for PMC ingression in the sea urchin embryo.
-
The Spatial Factor, Rather than Elevated CO(2), Controls the Soil Bacterial Community in a Temperate Forest Ecosystem
-
The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project.
-
The actin gene from Cryptococcus neoformans: structure and phylogenetic analysis.
-
The adaptive radiation of lichen-forming Teloschistaceae is associated with sunscreening pigments and a bark-to-rock substrate shift.
-
The anatomy of Dolichocebus gaimanensis, a stem platyrrhine monkey from Argentina.
-
The aquaporins, blueprints for cellular plumbing systems.
-
The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods.
-
The comparative genomics and complex population history of Papio
baboons.
-
The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism.
-
The complete genome sequence, organization and affinities of carrot red leaf virus.
-
The contribution of admixture to primate evolution.
-
The core and accessory genomes of Burkholderia pseudomallei: implications for human melioidosis.
-
The costal skeleton of Shanidar 3 and a reappraisal of Neandertal thoracic morphology.
-
The draft genome of tropical fruit durian (Durio zibethinus).
-
The ecology and epidemiology of malaria parasitism in wild chimpanzee reservoirs.
-
The effects of Cenozoic global change on squirrel phylogeny.
-
The effects of nucleotide substitution model assumptions on estimates of nonparametric bootstrap support.
-
The effects of plant sex on range distribution and allocation to reproduction.
-
The evolution and diversification of the red oaks of the California Floristic Province (Quercus section Lobatae, series Agrifoliae).
-
The evolution of chloroplast genes and genomes in ferns
-
The evolution of homing endonuclease genes and group I introns in nuclear rDNA.
-
The evolution of larval morphology and swimming performance in ascidians.
-
The evolution of seed dormancy: environmental cues, evolutionary hubs, and diversification of the seed plants.
-
The evolution of self-control.
-
The evolutionary history of ferns inferred from 25 low‐copy nuclear genes
-
The evolutionary radiation of plesiadapiforms.
-
The first hyaenodont from the late Oligocene Nsungwe Formation of Tanzania: Paleoecological insights into the Paleogene-Neogene carnivore transition.
-
The founding of Mauritian endemic coffee trees by a synchronous long-distance dispersal event.
-
The genetic basis of a plant-insect coevolutionary key innovation.
-
The genetic bottleneck in vertical transmission of subtype C HIV-1 is not driven by selection of especially neutralization-resistant virus from the maternal viral population.
-
The genetic structure and diversity of the A and B mating-type genes from the tropical oyster mushroom, Pleurotus djamor.
-
The genome of a cave plant, Primulina huaijiensis, provides insights into adaptation to limestone karst habitats.
-
The genome of the green anole lizard and a comparative analysis with birds and mammals.
-
The genomic epidemiology of multi-drug resistant invasive non-typhoidal Salmonella in selected sub-Saharan African countries.
-
The genomic underpinnings of apoptosis in Strongylocentrotus purpuratus.
-
The gut microbiome of nonhuman primates: Lessons in ecology and evolution.
-
The heterosexual human immunodeficiency virus type 1 epidemic in Thailand is caused by an intersubtype (A/E) recombinant of African origin.
-
The human olfactory transcriptome.
-
The importance of being connected.
-
The importance of scale in comparative microbiome research: New insights from the gut and glands of captive and wild lemurs.
-
The influence of natural diet composition, food intake level, and body size on ingesta passage in primates.
-
The invertebrate deuterostomes: an introduction to their phylogeny, reproduction, development, and genomics.
-
The junctophilin family of proteins: from bench to bedside.
-
The lemur revolution starts now: the genomic coming of age for a non-model organism.
-
The macrophage as an antineoplastic surveillance cell: biological perspectives.
-
The moderately repetitive DNA sequences of Caenorhabditis elegans do not show short-period interspersion.
-
The neurobiology of innate, volitional and learned vocalizations in mammals and birds.
-
The nicotinic acetylcholine receptor gene family of the silkworm, Bombyx mori.
-
The nonopisthokont septins: How many there are, how little we know about them, and how we might learn more.
-
The oldest Asian record of Anthropoidea.
-
The origin and evolution of animal appendages.
-
The phylogeny of extant starfish (Asteroidea: Echinodermata) including Xyloplax, based on comparative transcriptomics.
-
The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa.
-
The receptor kinase family: primary structure of rhodopsin kinase reveals similarities to the beta-adrenergic receptor kinase.
-
The role of diversification in community assembly of the oaks (Quercus L.) across the continental U.S.
-
The role of gut microbial community and metabolomic shifts in adaptive resistance of Atlantic killifish (Fundulus heteroclitus) to polycyclic aromatic hydrocarbons.
-
The role of viral introductions in sustaining community-based HIV epidemics in rural Uganda: evidence from spatial clustering, phylogenetics, and egocentric transmission models.
-
The roles of positive and negative selection in the molecular evolution of insect endosymbionts.
-
The sea urchin kinome: a first look.
-
The search for the fungal tree of life.
-
The tardigrade Hypsibius dujardini, a new model for studying the evolution of development.
-
The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms.
-
The utility of the incongruence length difference test.
-
The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage.
-
Thermally adaptive tradeoffs in closely related marine bacterial strains.
-
Thousands of small, novel genes predicted in global phage genomes.
-
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.
-
Three periods of regulatory innovation during vertebrate evolution.
-
Three phylogenetic groups have driven the recent population expansion of Cryptococcus neoformans.
-
Three-Dimensional Geometric Morphometric Analysis of Treeshrew (Scandentia) Lower Molars: Insight into Dental Variation and Systematics.
-
Time's arrow: heterochrony and the evolution of development.
-
Timing of complementary feeding is associated with gut microbiota diversity and composition and short chain fatty acid concentrations over the first year of life.
-
Timing the ancestor of the HIV-1 pandemic strains.
-
Tissue distribution and thyroid hormone effects on mRNA abundance for membrane transporters Mct8, Mct10, and organic anion-transporting polypeptides (Oatps) in a teleost fish.
-
Tissue-specific expression of Ran isoforms in the mouse.
-
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
-
Total energy expenditure of bottlenose dolphins (Tursiops truncatus) of different ages.
-
Toward an ecological classification of soil bacteria.
-
Towards a new classification of the Arthoniales (Ascomycota) based on a three-gene phylogeny focussing on the genus Opegrapha.
-
Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level.
-
Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus.
-
Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection.
-
Transcriptome-mining for single-copy nuclear markers in ferns
-
Transfer of photosynthesis genes to and from Prochlorococcus viruses.
-
Transient compartmentalization of simian immunodeficiency virus variants in the breast milk of african green monkeys.
-
Transmission of hepatitis B virus from an orthopedic surgeon with a high viral load.
-
Transmitted/founder simian immunodeficiency virus envelope sequences in vesicular stomatitis and Semliki forest virus vector immunized rhesus macaques.
-
Tree ferns: monophyletic groups and their relationships as revealed by four protein-coding plastid loci
-
Treponema pallidum infection in the wild baboons of East Africa: distribution and genetic characterization of the strains responsible.
-
Trimeric autotransporters: a distinct subfamily of autotransporter proteins.
-
Trimorphic stepping stones pave the way to fungal virulence.
-
TrmB Family Transcription Factor as a Thiol-Based Regulator of Oxidative Stress Response.
-
Two distinct broadly neutralizing antibody specificities of different clonal lineages in a single HIV-1-infected donor: implications for vaccine design.
-
Two forms of mitochondrial DNA ligase III are produced in Xenopus laevis oocytes.
-
Two new endophytic Atractiellomycetes, Atractidochium hillariae and Proceropycnis hameedii.
-
Two sniffing strategies in palinurid lobsters.
-
Type III protein secretion mechanism in mammalian and plant pathogens.
-
Uncovering the genomic signature of ancient introgression between white oak lineages (Quercus).
-
Unique expression of a sporophytic character on the gametophytes of notholaenid ferns (Pteridaceae).
-
Unique nasal turbinal morphology reveals Homunculus patagonicus functionally converged on modern platyrrhine olfactory sensitivity.
-
Universal nomenclature for oxytocin-vasotocin ligand and receptor families.
-
Unprecedented loss of ammonia assimilation capability in a urease-encoding bacterial mutualist.
-
Use of 16S ribosomal RNA gene analyses to characterize the bacterial signature associated with poor oral health in West Virginia.
-
Using BayesModelS to provide Bayesian- and phylogenetically-informed primate body mass predictions.
-
Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case.
-
Using a multigene phylogenetic analysis to assess generic delineation and character evolution in Verrucariaceae (Verrucariales, Ascomycota).
-
Using comparative genomic data to test for fast-X evolution.
-
Using secondary structure to identify ribosomal numts: cautionary examples from the human genome.
-
VIAF, a conserved inhibitor of apoptosis (IAP)-interacting factor that modulates caspase activation.
-
Vanilloid receptor-related osmotically activated channel (VR-OAC), a candidate vertebrate osmoreceptor.
-
Variability on the dot chromosome in the Drosophila simulans clade.
-
Variation in frequency of plastid RNA editing within Adiantum implies rapid evolution in fern plastomes.
-
Variation in modes and rates of evolution in nuclear and mitochondrial ribosomal DNA in the mushroom genus Amanita (Agaricales, Basidiomycota): phylogenetic implications.
-
Variation in rod spectral sensitivity of fishes is best predicted by habitat and depth.
-
Varieties of altruism in children and chimpanzees.
-
Vertical distribution and characterization of aerobic phototrophic bacteria at the Juan de Fuca Ridge in the Pacific Ocean.
-
Vertical support use and primate origins.
-
Vertical transmission of biosynthetic plasmids in aphid endosymbionts (Buchnera).
-
Vibrio metoecus sp. nov., a close relative of Vibrio cholerae isolated from coastal brackish ponds and clinical specimens.
-
Virologic failure in first-line human immunodeficiency virus therapy with a CCR5 entry inhibitor, aplaviroc, plus a fixed-dose combination of lamivudine-zidovudine: nucleoside reverse transcriptase inhibitor resistance regardless of envelope tropism.
-
Virome Analysis of Transfusion Recipients Reveals a Novel Human Virus That Shares Genomic Features with Hepaciviruses and Pegiviruses.
-
Vironome of Kaposi sarcoma associated herpesvirus-inflammatory cytokine syndrome in an AIDS patient reveals co-infection of human herpesvirus 8 and human herpesvirus 6A.
-
WASABI: an automated sequence processing system for multigene phylogenies.
-
West Nile virus in Mexico: evidence of widespread circulation since July 2002.
-
What we know and don't know about Earth's missing biodiversity.
-
Whole genome sequencing identifies circulating Beijing-lineage Mycobacterium tuberculosis strains in Guatemala and an associated urban outbreak.
-
Whole-Genome Analysis Illustrates Global Clonal Population Structure of the Ubiquitous Dermatophyte Pathogen Trichophyton rubrum.
-
Whole-Genome Identification, Phylogeny, and Evolution of the Cytochrome P450 Family 2 (CYP2) Subfamilies in Birds.
-
Whole-genome analyses resolve early branches in the tree of life of modern birds.
-
Whole-genome sequencing of Staphylococcus epidermidis bloodstream isolates from a prospective clinical trial reveals that complicated bacteraemia is caused by a limited number of closely related sequence types.
-
Why are some species more commonly afflicted by arthritis than others? A comparative study of spondyloarthropathy in primates and carnivores.
-
Why sequence all eukaryotes?
-
Widespread occurrence and phylogenetic placement of a soil clone group adds a prominent new branch to the fungal tree of life.
-
Widespread occurrence of spliceosomal introns in the rDNA genes of ascomycetes.
-
Wild Mandrillus sphinx are carriers of two types of lentivirus.
-
Working at the interface of phylogenetics and population genetics: a biogeographical analysis of Triaenops spp. (Chiroptera: Hipposideridae).
-
Zebrafish as a model for apolipoprotein biology: comprehensive expression analysis and a role for ApoA-IV in regulating food intake.
-
Zebrafish sparse corresponds to an orthologue of c-kit and is required for the morphogenesis of a subpopulation of melanocytes, but is not essential for hematopoiesis or primordial germ cell development.
-
alphaSU2, an epithelial integrin that binds laminin in the sea urchin embryo.
-
apex: phylogenetics with multiple genes.
-
Keywords of People
-
-
-
Alberts, Susan C.,
Robert F. Durden Distinguished Professor of Biology,
Duke Science & Society
-
Erickson, Harold Paul,
James B. Duke Distinguished Professor Emeritus,
Cell Biology
-
Hunt, Dana E.,
Associate Professor of Microbial Ecology,
Civil and Environmental Engineering
-
Kay, Richard Frederick,
Professor of Evolutionary Anthropology,
Earth and Climate Sciences
-
Kelsoe, Garnett H.,
James B. Duke Distinguished Professor of Immunology,
Integrative Immunobiology
-
Patek, Sheila N,
Mrs. Alexander Hehmeyer Professor,
Biology
-
Patz Jr., Edward F.,
James and Alice Chen Distinguished Professor of Radiology,
Pathology
-
Pimm, Stuart L.,
Doris Duke Distinguished Professor of Conservation Ecology in the Nicholas School of the Environment and Earth Sciences,
Duke Science & Society
-
Pryer, Kathleen M.,
Professor of Biology,
Duke Science & Society
-
Roth, V. Louise,
Professor of Biology,
Evolutionary Anthropology
-
Shinohara, Mari L.,
Professor of Integrative Immunobiology,
Cell Biology
-
Wernegreen, Jennifer Jo,
Lee Hill Snowdon Associate Professor,
Environmental Sciences and Policy
-
Williams, Blythe A.,
Associate Professor of the Practice Emerita of Evolutionary Anthropology,
Evolutionary Anthropology
-
Wray, Gregory Allan,
Professor of Biology,
Evolutionary Anthropology
-
Yoder, Anne Daphne,
Braxton Craven Distinguished Professor of Evolutionary Biology,
Duke Science & Society