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Subject Areas on Research
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"Smart" DNA interfaces.
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4.5 kb of the rat tyrosine hydroxylase 5' flanking sequence directs tissue specific expression during development and contains consensus sites for multiple transcription factors.
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A Bayesian network approach to operon prediction.
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A Flexible, Efficient Binomial Mixed Model for Identifying Differential DNA Methylation in Bisulfite Sequencing Data.
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A Fringe-modified Notch signal affects specification of mesoderm and endoderm in the sea urchin embryo.
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A Model Information Management Plan for Molecular Pathology Sequence Data Using Standards: From Sequencer to Electronic Health Record.
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A Nanopore Sequencing-Based Assay for Rapid Detection of Gene Fusions.
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A boy with fever and whorl keratopathy.
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A chemokine expressed in lymphoid high endothelial venules promotes the adhesion and chemotaxis of naive T lymphocytes.
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A cluster of HIV type 1 subtype C sequences from Ethiopia, observed in full genome analysis, is not sustained in subgenomic regions.
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A comparative study of gut microbiomes in captive nocturnal strepsirrhines.
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A comparison of the community diversity of foliar fungal endophytes between seedling and adult loblolly pines (Pinus taeda).
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A comprehensive iterative approach is highly effective in diagnosing individuals who are exome negative.
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A comprehensive structure-function analysis of Arabidopsis SNI1 defines essential regions and transcriptional repressor activity.
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A critical role of STAYGREEN/Mendel's I locus in controlling disease symptom development during Pseudomonas syringae pv tomato infection of Arabidopsis.
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A cross-sectional survey of Plasmodium falciparum pfcrt mutant haplotypes in the Democratic Republic of Congo.
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A gene on chromosome 11q23 coding for a putative glucose- 6-phosphate translocase is mutated in glycogen-storage disease types Ib and Ic.
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A genetic legacy of introgression confounds phylogeny and biogeography in oaks.
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A global meta-analysis of Tuber ITS rDNA sequences: species diversity, host associations and long-distance dispersal.
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A global reference for human genetic variation.
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A heterozygous IDH1R132H/WT mutation induces genome-wide alterations in DNA methylation.
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A high frequency of activating extracellular domain ERBB2 (HER2) mutation in micropapillary urothelial carcinoma.
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A high-resolution map of human evolutionary constraint using 29 mammals.
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A human protein related to yeast Cdc6p.
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A large kindred of early-onset osteoarthritis of the knee and hip: excluding the link to COL2A1 gene.
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A low-frequency variant at 8q24.21 is strongly associated with risk of oligodendroglial tumors and astrocytomas with IDH1 or IDH2 mutation.
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A maximum-likelihood base caller for DNA sequencing.
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A molecular phylogeny of the flagellated fungi (Chytridiomycota) and description of a new phylum (Blastocladiomycota).
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A molecular-based approach for examining responses of eukaryotes in microcosms to contaminant-spiked estuarine sediments.
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A mosaic analysis system with Cre or Tomato expression in the mouse.
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A multi-locus assessment of connectivity and historical demography in the bluehead wrasse (Thalassoma bifasciatum).
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A multi-locus molecular phylogeny of the Lepidoziaceae: laying the foundations for a stable classification.
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A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families.
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A mutation in the TRPC6 cation channel causes familial focal segmental glomerulosclerosis.
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A new NOS2 promoter polymorphism associated with increased nitric oxide production and protection from severe malaria in Tanzanian and Kenyan children.
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A new kinesin tree.
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A novel 2-oxoacid-dependent dioxygenase involved in the formation of the goiterogenic 2-hydroxybut-3-enyl glucosinolate and generalist insect resistance in Arabidopsis,.
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A novel PCR-clamping assay reducing plant host DNA amplification significantly improves prokaryotic endo-microbiome community characterization.
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A novel alternative splice domain in zebrafish tenascin-C.
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A novel androgen-regulated gene, PMEPA1, located on chromosome 20q13 exhibits high level expression in prostate.
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A novel chloroplast gene reported for flagellate plants
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A novel fibrotic disorder associated with increased dermal fibroblast proliferation and downregulation of genes of the microfibrillar network.
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A novel missense mutation of Wilms' Tumor 1 causes autosomal dominant FSGS.
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A nucleosome-guided map of transcription factor binding sites in yeast.
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A phylogeny of Adelanthaceae (Jungermanniales, Marchantiophyta) based on nuclear and chloroplast DNA markers, with comments on classification, cryptic speciation and biogeography.
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A polymorphism within the promoter of the TGFβ1 gene is associated with radiation sensitivity using an objective radiologic endpoint.
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A promoter sequence variant of ZNF750 is linked with familial psoriasis.
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A proteogenomic survey of the Medicago truncatula genome.
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A public resource facilitating clinical use of genomes.
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A strategy for the rapid identification of phosphorylation sites in the phosphoproteome.
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A systematic genetic assessment of 1,433 sequence variants of unknown clinical significance in the BRCA1 and BRCA2 breast cancer-predisposition genes.
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A taxonomic monograph of Ipomoea integrated across phylogenetic scales.
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A tiling-deletion-based genetic screen for cis-regulatory element identification in mammalian cells.
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A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny.
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A toolkit for genetics providers in follow-up of patients with non-diagnostic exome sequencing.
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ADA Deficiency: Evaluation of the Clinical and Laboratory Features and the Outcome.
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Abscisic acid regulates root elongation through the activities of auxin and ethylene in Arabidopsis thaliana.
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Absence of mitochondrial progesterone receptor polymorphisms in women with spontaneous preterm birth.
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Absence of mutation in the beta- and gamma-synuclein genes in familial autosomal dominant Parkinson's disease.
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Abundance and genetic diversity of aerobic anoxygenic phototrophic bacteria of coastal regions of the pacific ocean.
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Actionable diagnosis of neuroleptospirosis by next-generation sequencing.
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Activated cAMP-response element-binding protein regulates neuronal expression of presenilin-1.
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Additional evidence that PGAP1 loss of function causes autosomal recessive global developmental delay and encephalopathy.
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Adenylate cyclase toxin (ACT) from Bordetella hinzii: characterization and differences from ACT of Bordetella pertussis.
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Advanced urothelial carcinoma: next-generation sequencing reveals diverse genomic alterations and targets of therapy.
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African strains of hepatitis E virus that are distinct from Asian strains.
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Allele-specific gene expression in a wild nonhuman primate population.
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Alleles of the yeast Pms1 mismatch-repair gene that differentially affect recombination- and replication-related processes.
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Allotetraploid Mimulus sookensis are highly interfertile despite independent origins.
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Alteration of the alkaloid profile in genetically modified tobacco reveals a role of methylenetetrahydrofolate reductase in nicotine N-demethylation.
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An Arabidopsis thaliana lipoxygenase gene can be induced by pathogens, abscisic acid, and methyl jasmonate.
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An STS-based map of the human genome.
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An alignment-free method to identify candidate orthologous enhancers in multiple Drosophila genomes.
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An autonomously self-assembling dendritic DNA nanostructure for target DNA detection.
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An integrated genomic analysis of human glioblastoma multiforme.
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An obligately photosynthetic bacterial anaerobe from a deep-sea hydrothermal vent.
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Analyses of pediatric isolates of Cryptococcus neoformans from South Africa.
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Analysis of 30 genes (355 SNPS) related to energy homeostasis for association with adiposity in European-American and Yup'ik Eskimo populations.
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Analysis of APOBEC-induced mutations in yeast strains with low levels of replicative DNA polymerases.
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Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation.
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Analysis of association at single nucleotide polymorphisms in the APOE region.
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Analysis of erythropoietin and erythropoietin receptor genes expression in cattle during acute infection with Trypanosoma congolense.
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Analysis of homeobox gene HOXA10 mutations in cryptorchidism.
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Analysis of non-synonymous-coding variants of Parkinson's disease-related pathogenic and susceptibility genes in East Asian populations.
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Analysis of partial pol and env sequences indicates a high prevalence of HIV type 1 recombinant strains circulating in Gabon.
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Analysis of the gene coding for the BRCA2-interacting protein PALB2 in hereditary prostate cancer.
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Analysis of the indel at the ARMS2 3'UTR in age-related macular degeneration.
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Another surprise from the mitochondrial genome.
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Antiviral antibodies are necessary for control of simian immunodeficiency virus replication.
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Aquacultured rainbow trout (Oncorhynchus mykiss) possess a large core intestinal microbiota that is resistant to variation in diet and rearing density.
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Artifactual frame-shift p53 mutation at codon 249 detected with the Cyclist DNA sequencing method.
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Assessing disease severity in Pompe disease: the roles of a urinary glucose tetrasaccharide biomarker and imaging techniques.
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Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges.
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Association between 16S-23S internal transcribed spacer sequence groups of Mycobacterium avium complex and pulmonary disease.
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Association between novel PLCE1 variants identified in published esophageal cancer genome-wide association studies and risk of squamous cell carcinoma of the head and neck.
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Association of CD8(+) T lymphocyte repertoire spreading with the severity of DRESS syndrome.
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Association of Variants in BAG3 With Cardiomyopathy Outcomes in African American Individuals.
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Association of genetic variants of O6-methylguanine-DNA methyltransferase with risk of lung cancer in non-Hispanic Whites.
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Association of levels of fasting glucose and insulin with rare variants at the chromosome 11p11.2-MADD locus: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study.
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Association of low-frequency and rare coding-sequence variants with blood lipids and coronary heart disease in 56,000 whites and blacks.
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Association of misexpression with sterility in hybrids of Drosophila simulansand D. mauritiana.
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Associations between antibiotic exposure during pregnancy, birth weight and aberrant methylation at imprinted genes among offspring.
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Atractiella rhizophila, sp. nov., an endorrhizal fungus isolated from the Populus root microbiome.
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Authors' Reply.
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Automated constraint-based nucleotide sequence selection for DNA computation.
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Avian genomes. A flock of genomes. Introduction.
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Bamboo Specialists from Two Mammalian Orders (Primates, Carnivora) Share a High Number of Low-Abundance Gut Microbes.
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Benchmarking DNA isolation kits used in analyses of the urinary microbiome.
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Benchmarking ultra-high molecular weight DNA preservation methods for long-read and long-range sequencing.
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Best practices and joint calling of the HumanExome BeadChip: the CHARGE Consortium.
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Binding site graphs: a new graph theoretical framework for prediction of transcription factor binding sites.
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Biogeography in deep time - What do phylogenetics, geology, and paleoclimate tell us about early platyrrhine evolution?
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Bisulfite pyrosequencing.
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Bisulfite sequencing of cloned alleles.
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Blood-based diagnostic testing for Pompe disease: consistency between GAA enzyme activity in dried blood spots and GAA gene sequencing results.
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Boranophosphates as mimics of natural phosphodiesters in DNA.
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Burkholderia glumae infection in an infant with chronic granulomatous disease.
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CCAAT/enhancer-binding protein alpha is required for transcription of the beta 3-adrenergic receptor gene during adipogenesis.
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CFTR haplotype analysis reveals genetic heterogeneity in the etiology of congenital bilateral aplasia of the vas deferens.
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CLN5 and CLN8 protein association with ceramide synthase: biochemical and proteomic approaches.
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CLPB mutations cause 3-methylglutaconic aciduria, progressive brain atrophy, intellectual disability, congenital neutropenia, cataracts, movement disorder.
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CRISPR-Cas9 epigenome editing enables high-throughput screening for functional regulatory elements in the human genome.
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Calreticulin chaperones regulate functional expression of vomeronasal type 2 pheromone receptors.
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Canine model and genomic structural organization of glycogen storage disease type Ia (GSD Ia).
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Capturing the primordial Kras mutation initiating urethane carcinogenesis.
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Carbonic anhydrase and CO2 sensing during Cryptococcus neoformans growth, differentiation, and virulence.
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Characterization of a cholesterol response element (CRE) in the promoter of the cholesteryl ester transfer protein gene: functional role of the transcription factors SREBP-1a, -2, and YY1.
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Characterization of hepatocellular adenoma and carcinoma using microRNA profiling and targeted gene sequencing.
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Characterization of immunophilins in the silkmoth Bombyx mori.
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Characterization of protective immune response elicited by a trimeric envelope protein from an Indian clade C HIV-1 isolate in rhesus macaques.
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Characterization of the Transmitted Virus in an Ongoing HIV-1 Epidemic Driven by Injecting Drug Use.
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Characterization of the interleukin 1 receptor-associated kinase 4 (IRAK4)-encoding gene in salmonid fish: the functional copy is rearranged in Oncorhynchus mykiss and that factor can impair TLR signaling in mammalian cells.
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Characterization of the mouse transforming growth factor alpha gene: its expression during eyelid development and in waved 1 tissues.
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Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal.
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Characterization of the rat type III hexokinase gene promoter. A functional octamer 1 motif is critical for basal promoter activity.
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Characterization of the variable-number tandem repeats in vrrA from different Bacillus anthracis isolates.
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Characterization of three Arabidopsis homologs of human RING membrane anchor E3 ubiquitin ligase.
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Chromatin accessibility reveals insights into androgen receptor activation and transcriptional specificity.
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Chromosomal localization of gene for human glutamate receptor subunit-7.
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Circular viral DNA and anomalous junction sequence in PBMC of HIV-infected individuals with no detectable plasma HIV RNA.
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Circulating mutational portrait of cancer: manifestation of aggressive clonal events in both early and late stages.
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Clinical and environmental isolates of Cryptococcus gattii from Australia that retain sexual fecundity.
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Clinical application of exome sequencing in undiagnosed genetic conditions.
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Clinical experience with array CGH: case presentations from nine months of practice.
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Clinical interpretation and implications of whole-genome sequencing.
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Clonal amplification and maternal-infant transmission of nevirapine-resistant HIV-1 variants in breast milk following single-dose nevirapine prophylaxis.
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Clonal sequences recovered from plasma from patients with residual HIV-1 viremia and on intensified antiretroviral therapy are identical to replicating viral RNAs recovered from circulating resting CD4+ T cells.
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Cloning and characterization of a mammalian prenyl protein-specific protease.
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Cloning and characterization of two splice variants of human phosphodiesterase 11A.
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Cloning of rat thymic stromal lymphopoietin receptor (TSLPR) and characterization of genomic structure of murine Tslpr gene.
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Cloning of the promoter region of human endoglin, the target gene for hereditary hemorrhagic telangiectasia type 1.
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Cloning, overexpression, purification, and immunobiology of an 85-kilodalton outer membrane protein from Haemophilus ducreyi.
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Coculturing of Mosquito-Microbiome Bacteria Promotes Heme Degradation in Elizabethkingia anophelis.
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Coding Variation in ANGPTL4, LPL, and SVEP1 and the Risk of Coronary Disease.
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Community analysis reveals close affinities between endophytic and endolichenic fungi in mosses and lichens
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Compact organization of rRNA genes in the filamentous fungus Ashbya gossypii.
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Comparative analyses of clinical and environmental populations of Cryptococcus neoformans in Botswana.
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Comparative evaluation of a new magnetic bead-based DNA extraction method from fecal samples for downstream next-generation 16S rRNA gene sequencing.
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Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae).
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Comparative genome analysis of Trichophyton rubrum and related dermatophytes reveals candidate genes involved in infection.
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Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.
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Comparative genomics and regulatory evolution: conservation and function of the Chs and Apetala3 promoters.
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Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species.
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Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens.
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Comparative genomics reveals insights into avian genome evolution and adaptation.
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Comparative physical and transcript maps of approximately 1 Mb around loop-tail, a gene for severe neural tube defects on distal mouse chromosome 1 and human chromosome 1q22-q23.
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Comparative population structure of two deep-sea hydrothermal-vent-associated decapods (Chorocaris sp. 2 and Munidopsis lauensis) from southwestern Pacific back-arc basins.
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Comparative tests of evolutionary trade-offs in a palinurid lobster acoustic system.
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Comparison of ribosomal DNA ITS regions among geographic isolates of Cenococcum geophilum.
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Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-repeat analysis, amplified fragment length polymorphism, and surface layer protein A gene sequence typing.
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Comparison of viral Env proteins from acute and chronic infections with subtype C human immunodeficiency virus type 1 identifies differences in glycosylation and CCR5 utilization and suggests a new strategy for immunogen design.
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Comparisons of predicted genetic modules: identification of co-expressed genes through module gene flow.
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Complement factor H variant increases the risk of age-related macular degeneration.
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Complete genome sequencing and analysis of six enterovirus 71 strains with different clinical phenotypes.
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Complete genomic nucleotide sequence of the temperate bacteriophage Aa Phi 23 of Actinobacillus actinomycetemcomitans.
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Complexity reduction in context-dependent DNA substitution models.
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Comprehensive Genomic Profiling of Metastatic Tumors in a Phase 2 Biomarker Study of Everolimus in Advanced Renal Cell Carcinoma.
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Comprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomes.
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Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas.
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Concessions of an alpha male? Cooperative defence and shared reproduction in multi-male primate groups.
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Consensus multi-locus sequence typing scheme for Cryptococcus neoformans and Cryptococcus gattii.
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Conservation of Endo16 expression in sea urchins despite evolutionary divergence in both cis and trans-acting components of transcriptional regulation.
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Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee.
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Conservation of the chitin utilization pathway in the Vibrionaceae.
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Considering the Benefits and Risks of Research Participants' Access to Sequence Data.
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Contrasting quaternary histories in an ecologically divergent sister pair of low-dispersing intertidal fish (Xiphister) revealed by multilocus DNA analysis.
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Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory.
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Contribution of horizontal gene transfer to the evolution of Saccharomyces cerevisiae.
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Cowpox virus contains two copies of an early gene encoding a soluble secreted form of the type II TNF receptor.
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Cross-reactive HIV-1-neutralizing human monoclonal antibodies identified from a patient with 2F5-like antibodies.
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Culture-based study of endophytes associated with rubber trees in Peru reveals a new class of Pezizomycotina: Xylonomycetes.
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Cyanobacterial ribosomal RNA genes with multiple, endonuclease-encoding group I introns
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DAXX/ATRX, MEN1, and mTOR pathway genes are frequently altered in pancreatic neuroendocrine tumors.
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DNA Sequence Recognition by DNA Primase Using High-Throughput Primase Profiling.
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DNA copy number evolution in Drosophila cell lines.
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DNA global hypomethylation in squamous cell head and neck cancer associated with smoking, alcohol consumption and stage.
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DNA methylation alterations in response to pesticide exposure in vitro.
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DNA methylation at imprint regulatory regions in preterm birth and infection.
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DNA methylation of imprinted genes in Mexican-American newborn children with prenatal phthalate exposure.
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DNA methylation profiling in the Carolina Breast Cancer Study defines cancer subclasses differing in clinicopathologic characteristics and survival.
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DNA sequence and genetic characterization of plasmid pFQ11 from Frankia alni strain CpI1.
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DNA sequence characterization and molecular evolution of MAT1 and MAT2 mating-type loci of the self-compatible ascomycete mold Neosartorya fischeri.
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DNA sequencing: detecting methylation with force.
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DNMT3b polymorphism and hereditary nonpolyposis colorectal cancer age of onset.
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DNase I sensitivity QTLs are a major determinant of human expression variation.
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Data Harmonization for a Molecularly Driven Health System.
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Dating branches on the tree of life using DNA.
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De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads.
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De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae.
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De novo variants in the alternative exon 5 of SCN8A cause epileptic encephalopathy.
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Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing.
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Deciphering the model pathogenic fungus Cryptococcus neoformans.
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Decreased expression of lysyl hydroxylase 2 (LH2) in skin fibroblasts from three Ehlers-Danlos patients does not result from mutations in either the coding or proximal promoter region of the LH2 gene.
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Deep Sequencing of 71 Candidate Genes to Characterize Variation Associated with Alcohol Dependence.
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Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants.
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Deficiency of Adenosine Deaminase 2 (DADA2): Hidden Variants, Reduced Penetrance, and Unusual Inheritance.
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Depression in pregnancy, infant birth weight and DNA methylation of imprint regulatory elements.
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Destabilization of simple repetitive DNA sequences by transcription in yeast.
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Detailed analysis of allelic variation in the ABCA4 gene in age-related maculopathy.
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Detection of Donor's HIV Strain in HIV-Positive Kidney-Transplant Recipient.
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Detection of a mosaic CDKL5 deletion and inversion by optical genome mapping ends an exhaustive diagnostic odyssey.
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Detection of the JAK2 V617F mutation by LightCycler PCR and probe dissociation analysis.
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Determinants of CD4 independence for a human immunodeficiency virus type 1 variant map outside regions required for coreceptor specificity.
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Development of an env gp41-based heteroduplex mobility assay for rapid human immunodeficiency virus type 1 subtyping.
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Different transcript patterns in response to specialist and generalist herbivores in the wild Arabidopsis relative Boechera divaricarpa.
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Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape.
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Differential display of hepatic mRNA from killifish (Fundulus heteroclitus) inhabiting a Superfund estuary.
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Differential patterns of male and female mtDNA exchange across the Atlantic Ocean in the blue mussel, Mytilus edulis.
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Differential screening of a subtracted cDNA library: a method to search for genes preferentially expressed in multiple tissues.
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Differentially methylated regions of imprinted genes in prenatal, perinatal and postnatal human tissues.
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Digital microfluidic chips for chemical and biological applications.
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Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver.
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Distinct Epigenetic Effects of Tobacco Smoking in Whole Blood and among Leukocyte Subtypes.
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Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types.
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Distinguishing hypertrophic cardiomyopathy-associated mutations from background genetic noise.
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Distribution and diversity of planktonic fungi in the West Pacific Warm Pool.
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Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta).
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Distribution of WDR36 DNA sequence variants in patients with primary open-angle glaucoma.
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Distribution of optineurin sequence variations in an ethnically diverse population of low-tension glaucoma patients from the United States.
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Divergence dates for Malagasy lemurs estimated from multiple gene loci: geological and evolutionary context.
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Diversification before the most recent glaciation in Balanus glandula.
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Diversity and detection of nitrate assimilation genes in marine bacteria.
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Diversity and host range of foliar fungal endophytes: are tropical leaves biodiversity hotspots?
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Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR.
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Diversity in the weapons of sexual selection: horn evolution in the beetle genus Onthophagus (Coleoptera: Scarabaeidae).
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Do asexual polyploid lineages lead short evolutionary lives? A case study from the fern genus Astrolepis
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Dramatic mitochondrial gene rearrangements in the hermit crab Pagurus longicarpus (Crustacea, anomura).
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Droplet-based pyrosequencing using digital microfluidics.
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Drosophila ORC localizes to open chromatin and marks sites of cohesin complex loading.
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Dual infection with Ehrlichia chaffeensis and a spotted fever group rickettsia: a case report.
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Dynamic DNA methylation across diverse human cell lines and tissues.
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Early elicitor induction in members of a novel multigene family coding for highly related RING-H2 proteins in Arabidopsis thaliana
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Early-onset stroke and vasculopathy associated with mutations in ADA2.
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Ectomycorrhizal fungal community in a tropical forest dominated by the Neotropical Dipterocarp, Pakaraimea dipterocarpaceae
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Ectomycorrhizal fungal diversity in orchards of cultivated pecan (Carya illinoinensis; Juglandaceae).
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Effect of Genetic Diagnosis on Patients with Previously Undiagnosed Disease.
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Effects of inversions on within- and between-species recombination and divergence.
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Effects of premature termination codon polymorphisms in the Drosophila pseudoobscura subclade.
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Effects of raltegravir on 2-long terminal repeat circle junctions in HIV type 1 viremic and aviremic patients.
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Efficient Genome-Wide Sequencing and Low-Coverage Pedigree Analysis from Noninvasively Collected Samples.
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Elevated MAL expression is accompanied by promoter hypomethylation and platinum resistance in epithelial ovarian cancer.
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Emergence of Epidemic Dengue-1 Virus in the Southern Province of Sri Lanka.
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Empowering genomic medicine by establishing critical sequencing result data flows: the eMERGE example.
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Enhanced potency of a broadly neutralizing HIV-1 antibody in vitro improves protection against lentiviral infection in vivo.
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Enteropathy-associated T cell lymphoma subtypes are characterized by loss of function of SETD2.
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Epigenetic detection of human chromosome 14 uniparental disomy.
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Epigenetic regulation of AXL and risk of childhood asthma symptoms.
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Epstein-Barr Virus Genomes Reveal Population Structure and Type 1 Association with Endemic Burkitt Lymphoma.
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Essential light chain of Drosophila nonmuscle myosin II.
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Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae.
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Evaluation and optimisation of indel detection workflows for ion torrent sequencing of the BRCA1 and BRCA2 genes.
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Evaluation of 23S rRNA PCR primers for use in phylogenetic studies of bacterial diversity.
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Evaluation of Lipin 2 as a candidate gene for autosomal dominant 1 high-grade myopia.
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Evaluation of chromatin accessibility in prefrontal cortex of individuals with schizophrenia.
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Evaluation of the genomic extent of effects of fixed inversion differences on intraspecific variation and interspecific gene flow in Drosophila pseudoobscura and D. persimilis.
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Evidence against equimolarity of large repeat arrangements and a predominant master circle structure of the mitochondrial genome from a monkeyflower (Mimulus guttatus) lineage with cryptic CMS.
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Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition.
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Evidence for reciprocal origins in Polypodium hesperium (Polypodiaceae): A fern model system for investigating how multiple origins shape allopolyploid genomes
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Evidence for sexuality in the opportunistic fungal pathogen Aspergillus fumigatus.
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Evidence from opsin genes rejects nocturnality in ancestral primates.
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Evidence of local evolution of tomato-infecting begomovirus species in West Africa: characterization of tomato leaf curl Mali virus and tomato yellow leaf crumple virus from Mali.
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Evidence of mRNA-mediated intron loss in the human-pathogenic fungus Cryptococcus neoformans.
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Evidence of sexual recombination among Cryptococcus neoformans serotype A isolates in sub-Saharan Africa.
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Evidence-ranked motif identification.
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Evolution of Pleopsidium (lichenized Ascomycota) S943 group I introns and the phylogeography of an intron-encoded putative homing endonuclease.
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Evolution of calcium-carbonate skeletons in the Hydractiniidae.
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Evolution of drug-resistant viral populations during interruption of antiretroviral therapy.
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Evolution of flux control in the glucosinolate pathway in Arabidopsis thaliana.
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Evolution of genes and genomes on the Drosophila phylogeny.
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Evolutionary analysis of the well characterized endo16 promoter reveals substantial variation within functional sites.
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Evolutionary insights into the ecology of coronaviruses.
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Evolutionary relationships within the Neotropical, eusporangiate fern genus Danaea (Marattiaceae)
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Exaggerated CpH methylation in the autism-affected brain.
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Examination of type IV pilus expression and pilus-associated phenotypes in Kingella kingae clinical isolates.
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Exclusion of lumican and fibromodulin as candidate genes in MYP3 linked high grade myopia.
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Exome analysis of two limb-girdle muscular dystrophy families: mutations identified and challenges encountered.
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Exome sequencing followed by large-scale genotyping fails to identify single rare variants of large effect in idiopathic generalized epilepsy.
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Exome sequencing followed by large-scale genotyping suggests a limited role for moderately rare risk factors of strong effect in schizophrenia.
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Exome sequencing identifies distinct mutational patterns in liver fluke-related and non-infection-related bile duct cancers.
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Exome sequencing identifies highly recurrent MED12 somatic mutations in breast fibroadenoma.
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Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma.
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Exome sequencing in amyotrophic lateral sclerosis identifies risk genes and pathways.
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Exome sequencing of gastric adenocarcinoma identifies recurrent somatic mutations in cell adhesion and chromatin remodeling genes.
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Exome sequencing of liver fluke-associated cholangiocarcinoma.
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Exome-wide Sequencing Shows Low Mutation Rates and Identifies Novel Mutated Genes in Seminomas.
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Expansion of somatically reverted memory CD8+ T cells in patients with X-linked lymphoproliferative disease caused by selective pressure from Epstein-Barr virus.
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Expansion of the Stictidaceae by the addition of the saxicolous lichen-forming genus Ingvariella.
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Experimental analysis of sources of error in evolutionary studies based on Roche/454 pyrosequencing of viral genomes.
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Explicit DNase sequence bias modeling enables high-resolution transcription factor footprint detection.
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Expressed sequence tag analysis in Cycas, the most primitive living seed plant.
-
Expression in aneuploid Drosophila S2 cells.
-
Expression of a chemokine by ciliary body epithelium in horses with naturally occurring recurrent uveitis and in cultured ciliary body epithelial cells.
-
Expression of the protein tyrosine phosphatase, phosphatase of regenerating liver 1, in the outer segments of primate cone photoreceptors.
-
Expression profile of an androgen regulated prostate specific homeobox gene NKX3.1 in primary prostate cancer.
-
Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C.
-
Extending assembly of short DNA sequences to handle error.
-
Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. x divaricarpa, and A. holboellii (Brassicaceae).
-
F-Seq: a feature density estimator for high-throughput sequence tags.
-
FHIT and FRA3B 3p14.2 allele loss are common in lung cancer and preneoplastic bronchial lesions and are associated with cancer-related FHIT cDNA splicing aberrations.
-
Factors associated with the diversification of the gut microbial communities within chimpanzees from Gombe National Park.
-
False gene and chromosome losses in genome assemblies caused by GC content variation and repeats.
-
Fanconi anemia gene variants in therapy-related myeloid neoplasms.
-
Fast Dissemination of New HIV-1 CRF02/A1 Recombinants in Pakistan.
-
Faster algorithms for optimal multiple sequence alignment based on pairwise comparisons.
-
Finding regulatory DNA motifs using alignment-free evolutionary conservation information.
-
Fine-scale variation in meiotic recombination in Mimulus inferred from population shotgun sequencing.
-
Finishing the euchromatic sequence of the human genome.
-
Flexible use of high-density oligonucleotide arrays for single-nucleotide polymorphism discovery and validation.
-
Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing.
-
Formalizing morphologically cryptic biological entities: new insights from DNA taxonomy, hybridization, and biogeography in the leafy liverwort Porella platyphylla (Jungermanniopsida, Porellales).
-
Frequent circumarctic and rare transequatorial dispersals in the lichenised agaric genus Lichenomphalia (Hygrophoraceae, Basidiomycota).
-
Frequent detection of codon 877 mutation in the androgen receptor gene in advanced prostate cancers.
-
Functional analysis of novel SNPs and mutations in human and mouse genomes.
-
Functional and molecular characterization of human monoclonal antibody reactive with the immunodominant region of HIV type 1 glycoprotein 41.
-
Functional consequences of natural sequence variation in the activation domain of HIV-1 Rev.
-
Fungal Community Responses to Past and Future Atmospheric CO2 Differ by Soil Type.
-
Fungal community analysis by large-scale sequencing of environmental samples.
-
Gene prediction and verification in a compact genome with numerous small introns.
-
Generating RNA Baits for Capture-Based Enrichment.
-
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
-
Genetic Analysis of Complex Traits in Saccharomyces cerevisiae
.
-
Genetic Drivers of Kidney Defects in the DiGeorge Syndrome.
-
Genetic analysis of the requirements for SOS induction by nalidixic acid in Escherichia coli.
-
Genetic and 'cultural' similarity in wild chimpanzees.
-
Genetic and functional association of FAM5C with myocardial infarction.
-
Genetic and neutralization properties of subtype C human immunodeficiency virus type 1 molecular env clones from acute and early heterosexually acquired infections in Southern Africa.
-
Genetic dissection of interspecific differences in yeast thermotolerance.
-
Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats.
-
Genetic diversity of the Cryptococcus species complex suggests that Cryptococcus gattii deserves to have varieties.
-
Genetic isolation between two recently diverged populations of a symbiotic fungus.
-
Genetic screen of African Americans with Fuchs endothelial corneal dystrophy.
-
Genetic structure and genealogy in the Sphagnum subsecundum complex (Sphagnaceae: Bryophyta).
-
Genetic typing of HIV-2 from a Senegalese/German heterosexual transmission.
-
Genetic variability in beta-defensins is not associated with susceptibility to Staphylococcus aureus bacteremia.
-
Genetic variation in the 3' non-coding region of dengue viruses.
-
Genetic variation in the odorant receptor OR2J3 is associated with the ability to detect the "grassy" smelling odor, cis-3-hexen-1-ol.
-
Genetic variation within and among populations of the threatened lichen Lobaria pulmonaria in Switzerland and implications for its conservation.
-
Genome Evolution and Innovation across the Four Major Lineages of Cryptococcus gattii.
-
Genome Sequencing of Arabidopsis abp1-5 Reveals Second-Site Mutations That May Affect Phenotypes.
-
Genome engineering: the next genomic revolution.
-
Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.
-
Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production.
-
Genome wide analyses reveal little evidence for adaptive evolution in many plant species.
-
Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS).
-
Genome-wide mutagenesis of influenza virus reveals unique plasticity of the hemagglutinin and NS1 proteins.
-
Genome-wide prediction of imprinted murine genes.
-
Genome-wide quantification of the effects of DNA methylation on human gene regulation.
-
Genome-wide scan for prostate cancer susceptibility genes using families from the University of Michigan prostate cancer genetics project finds evidence for linkage on chromosome 17 near BRCA1.
-
Genome-wide scan reveals signatures of selection related to pollution adaptation in non-model estuarine Atlantic killifish (Fundulus heteroclitus).
-
Genome-wide specificity of DNA binding, gene regulation, and chromatin remodeling by TALE- and CRISPR/Cas9-based transcriptional activators.
-
Genomes of Ashbya fungi isolated from insects reveal four mating-type loci, numerous translocations, lack of transposons, and distinct gene duplications.
-
Genomewide investigation of adaptation to harmful algal blooms in common bottlenose dolphins (Tursiops truncatus).
-
Genomic determination of the glucocorticoid response reveals unexpected mechanisms of gene regulation.
-
Genomic insights into the atopic eczema-associated skin commensal yeast Malassezia sympodialis.
-
Genomic landscape of the global oak phylogeny.
-
Genomic organization, expression, and localization of murine Ran-binding protein 2 (RanBP2) gene.
-
Genomic signatures of near-extinction and rebirth of the crested ibis and other endangered bird species.
-
Genomic structure and embryonic expression of estrogen receptor beta a (ERbetaa) in zebrafish (Danio rerio).
-
Genomic structure and organization of the high grade Myopia-2 locus (MYP2) critical region: mutation screening of 9 positional candidate genes.
-
Genomic sweeping for hypermethylated genes.
-
Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems.
-
Genomics and genetics of human and primate y chromosomes.
-
Genotypic analysis of tumor suppressor genes PTEN/MMAC1 and p53 in head and neck squamous cell carcinomas.
-
Genotypic and Phenotypic Diversity among Human Isolates of Akkermansia muciniphila.
-
Genotypic diversity of anaerobic isolates from bloodstream infections.
-
Genotypic diversity of coagulase-negative staphylococci causing endocarditis: a global perspective.
-
Geographic selection in the small heat shock gene complex differentiating populations of Drosophila pseudoobscura.
-
Germline Genetic IKZF1 Variation and Predisposition to Childhood Acute Lymphoblastic Leukemia.
-
Germline Mutations in ATM and BRCA1/2 Distinguish Risk for Lethal and Indolent Prostate Cancer and are Associated with Early Age at Death.
-
Germline and somatic SMARCA4 mutations characterize small cell carcinoma of the ovary, hypercalcemic type.
-
Germline genetic variants in men with prostate cancer and one or more additional cancers.
-
Germline mutations in HOXB13 and prostate-cancer risk.
-
Germline mutations in glial cell line-derived neurotrophic factor (GDNF) and RET in a Hirschsprung disease patient.
-
Giant deep-sea protist produces bilaterian-like traces.
-
Global analysis of genomic instability caused by DNA replication stress in Saccharomyces cerevisiae.
-
Global analysis of the evolution and mechanism of echinocandin resistance in Candida glabrata.
-
Global patterns in peatmoss biodiversity.
-
Glycogen-branching enzyme deficiency leads to abnormal cardiac development: novel insights into glycogen storage disease IV.
-
Group-I intron family in the nuclear ribosomal RNA small subunit genes of Cenococcum geophilum isolates.
-
HBV whole-genome mutation profile in HIV-1/HBV coinfected patients in a long-term follow-up study.
-
HIV Resistance and Prevention of Mother-to-Child Transmission Regimen in HIV-Infected Infants in Northern Tanzania.
-
HIV Transmission Patterns Among Immigrant Latinos Illuminated by the Integration of Phylogenetic and Migration Data.
-
HIV quasispecies and resampling.
-
HIV type 1 from a patient with baseline resistance to CCR5 antagonists uses drug-bound receptor for entry.
-
Haplotype-resolved assembly of diploid genomes without parental data.
-
Harmonizing Clinical Sequencing and Interpretation for the eMERGE III Network.
-
Helicobacter canis bacteremia in a patient with fever of unknown origin.
-
Heritable individual-specific and allele-specific chromatin signatures in humans.
-
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.
-
Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition.
-
Heterothallic mating in Mucor irregularis and first isolate of the species outside of Asia.
-
High diversity and widespread occurrence of mitotic spore mats in ectomycorrhizal Pezizales.
-
High genetic diversity and population differentiation in Boechera fecunda, a rare relative of Arabidopsis.
-
High throughput detection of M6P/IGF2R intronic hypermethylation and LOH in ovarian cancer.
-
High-Throughput Mapping of B Cell Receptor Sequences to Antigen Specificity.
-
High-Throughput Profiling of Extrachromosomal Linear DNAs of Long Terminal Repeat Retrotransposons by ALE-seq.
-
High-resolution mapping and characterization of open chromatin across the genome.
-
Highly active zinc-finger nucleases by extended modular assembly.
-
Historical effects on beta diversity and community assembly in Amazonian trees.
-
History and evolution of alpine plants endemic to the Qinghai-Tibetan Plateau: Aconitum gymnandrum (Ranunculaceae).
-
Host lifestyle affects human microbiota on daily timescales.
-
Host-symbiont stability and fast evolutionary rates in an ant-bacterium association: cospeciation of camponotus species and their endosymbionts, candidatus blochmannia.
-
Human GFRA1: cloning, mapping, genomic structure, and evaluation as a candidate gene for Hirschsprung disease susceptibility.
-
Human and mouse alpha-synuclein genes: comparative genomic sequence analysis and identification of a novel gene regulatory element.
-
Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants.
-
Human disturbance causes the formation of a hybrid swarm between two naturally sympatric fish species.
-
Human genomic regions with exceptionally high levels of population differentiation identified from 911 whole-genome sequences.
-
Human glycogen debranching enzyme gene (AGL): complete structural organization and characterization of the 5' flanking region.
-
Human immunodeficiency virus type 1 protease genotype predicts immune and viral responses to combination therapy with protease inhibitors (PIs) in PI-naive patients.
-
Human promoters are intrinsically directional.
-
Human syndromes of immunodeficiency and dysregulation are characterized by distinct defects in T-cell receptor repertoire development.
-
Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus).
-
IGF2R genetic variants, circulating IGF2 concentrations and colon cancer risk in African Americans and Whites.
-
Identification and characterization of K12 (SECTM1), a novel human gene that encodes a Golgi-associated protein with transmembrane and secreted isoforms.
-
Identification and characterization of a Drosophila nuclear receptor with the ability to inhibit the ecdysone response.
-
Identification and characterization of a cDNA encoding cytochrome P450 3A from the fresh water teleost medaka (Oryzias latipes).
-
Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genome.
-
Identification and characterization of the human parkin gene promoter.
-
Identification and developmental expression of two activin receptors in baboon lung.
-
Identification of HIV-1 genitourinary tract compartmentalization by analyzing the env gene sequences in urine.
-
Identification of a p28 gene in Ehrlichia ewingii: evaluation of gene for use as a target for a species-specific PCR diagnostic assay.
-
Identification of a putative Salmonella enterica serotype typhimurium host range factor with homology to IpaH and YopM by signature-tagged mutagenesis.
-
Identification of a region of genetic variability among Bacillus anthracis strains and related species.
-
Identification of amino acid substitutions associated with neutralization phenotype in the human immunodeficiency virus type-1 subtype C gp120.
-
Identification of asteroid genera with species capable of larval cloning.
-
Identification of core promoter modules in Drosophila and their application in accurate transcription start site prediction.
-
Identification of differentially methylated genes in normal prostate tissues from African American and Caucasian men.
-
Identification of driver genes in hepatocellular carcinoma by exome sequencing.
-
Identification of fungi associated with municipal compost using DNA-based techniques.
-
Identification of genes expressed in a human scleral cDNA library.
-
Identification of new mamu-DRB alleles using DGGE and direct sequencing.
-
Identification of recurrent USP48 and BRAF mutations in Cushing's disease.
-
Identification of the mating-type (MAT) locus that controls sexual reproduction of Blastomyces dermatitidis.
-
Identification of the sequences within the human complement 3 promoter required for estrogen responsiveness provides insight into the mechanism of tamoxifen mixed agonist activity.
-
Identification of variants in CNGA3 as cause for achromatopsia by exome sequencing of a single patient.
-
Identification of virulence mutants of the fungal pathogen Cryptococcus neoformans using signature-tagged mutagenesis.
-
Identification, characterization, and evolution of a primate beta-defensin gene cluster.
-
Identifying branch-specific positive selection throughout the regulatory genome using an appropriate proxy neutral.
-
Identifying gene expression from single cells to single genes.
-
Identifying multiple origins of polyploid taxa: a multilocus study of the hybrid cloak fern (Astrolepis integerrima; Pteridaceae).
-
Identifying novel transcriptional components controlling energy metabolism.
-
Immunization with recombinant HLA classes I and II, HIV-1 gp140, and SIV p27 elicits protection against heterologous SHIV infection in rhesus macaques.
-
Impact of genotypic resistance testing on physician selection of antiretroviral therapy.
-
Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota).
-
Implications of the first complete human genome assembly.
-
Importance sampling for the infinite sites model.
-
Imprinted expression of the canine IGF2R, in the absence of an anti-sense transcript or promoter methylation.
-
Imprinting of PEG3, the human homologue of a mouse gene involved in nurturing behavior.
-
In Vitro Antifungal Susceptibility of Yeast and Mold Phases of Isolates of Dimorphic Fungal Pathogen Emergomyces africanus (Formerly Emmonsia sp.) from HIV-Infected South African Patients.
-
In-depth analysis of Kaposi's sarcoma-associated herpesvirus microRNA expression provides insights into the mammalian microRNA-processing machinery.
-
Inbreeding depression in non-human primates: a historical review of methods used and empirical data.
-
Increased rectal microbial richness is associated with the presence of colorectal adenomas in humans.
-
Increased risk of low birth weight in women with placental malaria associated with P. falciparum VAR2CSA clade.
-
Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae.
-
Informative priors based on transcription factor structural class improve de novo motif discovery.
-
Inhibition of a yeast LTR retrotransposon by human APOBEC3 cytidine deaminases.
-
Initial antibodies binding to HIV-1 gp41 in acutely infected subjects are polyreactive and highly mutated.
-
Initial sequencing and analysis of the human genome.
-
Initial sequencing and comparative analysis of the mouse genome.
-
Insensitivity of Diverse and Temporally Variable Particle-Associated Microbial Communities to Bulk Seawater Environmental Parameters.
-
Integrated RNA and DNA sequencing reveals early drivers of metastatic breast cancer.
-
Integrating chemical mutagenesis and whole-genome sequencing as a platform for forward and reverse genetic analysis of Chlamydia.
-
Integration of Contact Tracing and Phylogenetics in an Investigation of Acute HIV Infection.
-
Interactive or static reports to guide clinical interpretation of cancer genomics.
-
Interrogation of individual intratumoral B lymphocytes from lung cancer patients for molecular target discovery.
-
Intraspecific phylogenetic congruence among multiple symbiont genomes.
-
Intraspecific variation in symbiont genomes: bottlenecks and the aphid-buchnera association.
-
Invasive Curvularia Infection in Pediatric Patients With Hematologic Malignancy Identified by Fungal Sequencing.
-
Invasive disease caused by nontuberculous mycobacteria, Tanzania.
-
Investigating deep phylogenetic relationships among cyanobacteria and plastids by small subunit rRNA sequence analysis.
-
Involvement of two putative alternative sigma factors in stress response of the radioresistant bacterium Deinococcus radiodurans.
-
Is local adaptation in Mimulus guttatus caused by trade-offs at individual loci?
-
Is the aneuploid chromosome in an apomictic Boechera holboellii a genuine B chromosome?
-
Isolation and characterization of a new chemokine receptor gene, the putative chicken CXCR1.
-
Isolation and characterization of the CYP71D16 trichome-specific promoter from Nicotiana tabacum L.
-
Isolation and initial characterization of the 5' flanking region of the human and murine cyclic guanosine monophosphate-phosphodiesterase beta-subunit genes.
-
Isolation and initial characterization of the BRCA2 promoter.
-
Isolation and nucleotide sequence of human liver glycogen debranching enzyme mRNA: identification of multiple tissue-specific isoforms.
-
Lack of association of mutations in optineurin with disease in patients with adult-onset primary open-angle glaucoma.
-
Lactobacillus reuteri DSM 20016 produces cobalamin-dependent diol dehydratase in metabolosomes and metabolizes 1,2-propanediol by disproportionation.
-
Landscape position influences microbial composition and function via redistribution of soil water across a watershed.
-
Large introns in relation to alternative splicing and gene evolution: a case study of Drosophila bruno-3.
-
Large scale association analysis for identification of genes underlying premature coronary heart disease: cumulative perspective from analysis of 111 candidate genes.
-
Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana.
-
Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome.
-
Leptotrichia endocarditis: report of two cases from the International Collaboration on Endocarditis (ICE) database and review of previous cases.
-
Leuconostoc bacteremia in pediatric patients with short bowel syndrome: case series and review.
-
Life, diversity and the pursuit of haplotypes.
-
LigAmp for sensitive detection of single-nucleotide differences.
-
Living related versus deceased donor liver transplantation for maple syrup urine disease.
-
Low frequency of paleoviral infiltration across the avian phylogeny.
-
Low level exposure to the flame retardant BDE-209 reduces thyroid hormone levels and disrupts thyroid signaling in fathead minnows.
-
Low prevalence of Pneumocystis pneumonia (PCP) but high prevalence of pneumocystis dihydropteroate synthase (dhps) gene mutations in HIV-infected persons in Uganda.
-
Low prevalence of myocilin mutations in an African American population with primary open-angle glaucoma.
-
MPDA: microarray pooled DNA analyzer.
-
MSIseq: Software for Assessing Microsatellite Instability from Catalogs of Somatic Mutations.
-
MTL genotypes, phenotypic switching, and susceptibility profiles of Candida parapsilosis species group compared to Lodderomyces elongisporus.
-
Major clades of Agaricales: a multilocus phylogenetic overview.
-
Malaria severity and human nitric oxide synthase type 2 (NOS2) promoter haplotypes.
-
Mammalian dwarfins are phosphorylated in response to transforming growth factor beta and are implicated in control of cell growth.
-
Mass spectrometry of nucleic acids: the promise of matrix-assisted laser desorption-ionization (MALDI) mass spectrometry.
-
Maternal microchimerism in Hirschsprung's disease.
-
Mating-type locus of Cryptococcus neoformans: a step in the evolution of sex chromosomes.
-
Matrix metalloproteinase-1 gene promoter polymorphism and risk of ovarian cancer.
-
Maximizing ecological and evolutionary insight in bisulfite sequencing data sets.
-
Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone.
-
Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships.
-
Mechanisms for dominance: Adh heterodimer formation in heterozygotes between ENU or X-ray induced null alleles and normal alleles in Drosophila melanogaster.
-
Medical oncologists' perspectives of the Veterans Affairs National Precision Oncology Program.
-
Merfin: improved variant filtering, assembly evaluation and polishing via k-mer validation.
-
Mesotheliomas induced in rats by the fibrous mineral erionite are independent from p53 alterations.
-
Methodology for a vaginal and urinary microbiome study in women with mixed urinary incontinence.
-
Microbiome of the upper troposphere: species composition and prevalence, effects of tropical storms, and atmospheric implications.
-
Microsatellite analysis of genetic diversity among clinical and nonclinical Saccharomyces cerevisiae isolates suggests heterozygote advantage in clinical environments.
-
Misidentification of Neosartorya pseudofischeri as Aspergillus fumigatus in a lung transplant patient.
-
Mismatch repair proteins regulate heteroduplex formation during mitotic recombination in yeast.
-
Missing genetic risk in neural tube defects: can exome sequencing yield an insight?
-
Mistaken Identity: Another Bias in the Use of Relative Genetic Divergence Measures for Detecting Interspecies Introgression.
-
Mitochondrial DNA sequence variation associated with dementia and cognitive function in the elderly.
-
Mitochondrial NADP(H) deficiency due to a mutation in NADK2 causes dienoyl-CoA reductase deficiency with hyperlysinemia.
-
Mitochondrial gene rearrangements confirm the parallel evolution of the crab-like form.
-
Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogen Rhizoctonia solani AG-3.
-
Modeling the evolution of regulatory elements by simultaneous detection and alignment with phylogenetic pair HMMs.
-
Mojave toxin in venom of Crotalus helleri (Southern Pacific Rattlesnake): molecular and geographic characterization.
-
Molecular analyses of the Arabidopsis TUBBY-like protein gene family.
-
Molecular analysis of HLA-B35 alleles and their relationship to HLA-B15 alleles.
-
Molecular analysis of the Cryptococcus neoformans ADE2 gene, a selectable marker for transformation and gene disruption.
-
Molecular and functional characterization of voltage-gated sodium channel variants from Drosophila melanogaster.
-
Molecular and genetic biomarkers implemented from next-generation sequencing provide treatment insights in clinical practice for Waldenström macroglobulinemia.
-
Molecular basis of a novel adaptation to hypoxic-hypercapnia in a strictly fossorial mole.
-
Molecular characterization of CLPT1, a SEC4-like Rab/GTPase of the phytopathogenic fungus Colletotrichum lindemuthianum which is regulated by the carbon source.
-
Molecular characterization of a highly divergent HIV type 1 isolate obtained early in the AIDS epidemic from the Democratic Republic of Congo.
-
Molecular characterization of an arachnid sodium channel gene from the varroa mite (Varroa destructor).
-
Molecular characterization of the spatial diversity and novel lineages of mycoplankton in Hawaiian coastal waters.
-
Molecular evidence for dual pyrethroid-receptor sites on a mosquito sodium channel.
-
Molecular evolution of X-linked accessory gland proteins in Drosophila pseudoobscura.
-
Molecular evolution of a Drosophila homolog of human BRCA2.
-
Molecular evolutionary dynamics of cytochrome b in strepsirrhine primates: the phylogenetic significance of third-position transversions.
-
Molecular identification of Aspergillus species collected for the Transplant-Associated Infection Surveillance Network.
-
Molecular identification, cloning and characterization of transmitted/founder HIV-1 subtype A, D and A/D infectious molecular clones.
-
Molecular insights into the phylogeny and subgeneric classification of Frullania Raddi (Frullaniaceae, Porellales).
-
Molecular phylogenetic analysis of the Papionina using concatenation and species tree methods.
-
Molecular phylogeny of Heteroplacidium, Placidium, and related catapyrenioid genera (Verrucariaceae, lichen-forming Ascomycota).
-
Molecular phylogeography and cryptic speciation in the mosses, Mielichhoferia elongata and M. mielichhoferiana (Bryaceae).
-
Molecular recognition of ketamine by a subset of olfactory G protein-coupled receptors.
-
Most environmental isolates of Cryptococcus neoformans var. grubii (serotype A) are not lethal for mice.
-
Multicenter evaluation of the Vitek 2 anaerobe and Corynebacterium identification card.
-
Multicenter evaluation of the new Vitek 2 Neisseria-Haemophilus identification card.
-
Multidonor analysis reveals structural elements, genetic determinants, and maturation pathway for HIV-1 neutralization by VRC01-class antibodies.
-
Multilocus sequence typing reveals three genetic subpopulations of Cryptococcus neoformans var. grubii (serotype A), including a unique population in Botswana.
-
Multiple colonisations of the western Indian Ocean by Pteropus fruit bats (Megachiroptera: Pteropodidae): the furthest islands were colonised first.
-
Multiple origins of high reciprocal symbiotic specificity at an intercontinental spatial scale among gelatinous lichens (Collemataceae, Lecanoromycetes).
-
Multiple origins of hybrid strains of Cryptococcus neoformans with serotype AD.
-
Multiple potential regulatory elements in the 5' flanking region of the human alpha 1a-adrenergic receptor.
-
Multiplex 5' nuclease-quantitative PCR for diagnosis of relapsing fever in a large Tanzanian cohort.
-
Multiplexed short tandem repeat polymorphisms of the Weber 8A set of markers using tailed primers and infrared fluorescence detection.
-
Multivariate analysis of associations of 42 genes in ADHD, ODD and conduct disorder.
-
Murine noroviruses comprising a single genogroup exhibit biological diversity despite limited sequence divergence.
-
Mutation and overexpression of p53 in early-stage epithelial ovarian cancer.
-
Mutation exposed: a neutral explanation for extreme base composition of an endosymbiont genome.
-
Mutation of TBCE causes hypoparathyroidism-retardation-dysmorphism and autosomal recessive Kenny-Caffey syndrome.
-
Mutation of bcl-x gene in non-Hodgkin's lymphoma.
-
Mutation screening of patients with Leber Congenital Amaurosis or the enhanced S-Cone Syndrome reveals a lack of sequence variations in the NRL gene.
-
Mutational Landscapes of Smoking-Related Cancers in Caucasians and African Americans: Precision Oncology Perspectives at Wake Forest Baptist Comprehensive Cancer Center.
-
Mutational landscapes of tongue carcinoma reveal recurrent mutations in genes of therapeutic and prognostic relevance.
-
Mutations in CIC and FUBP1 contribute to human oligodendroglioma.
-
Mutations in DDX3X Are a Common Cause of Unexplained Intellectual Disability with Gender-Specific Effects on Wnt Signaling.
-
Mutations in NGLY1 cause an inherited disorder of the endoplasmic reticulum-associated degradation pathway.
-
Mutations in SCO2 are associated with autosomal-dominant high-grade myopia.
-
Mutations in a gene encoding a novel protein containing a phosphotyrosine-binding domain cause type 2 cerebral cavernous malformations.
-
Mutations in isocitrate dehydrogenase 1 and 2 occur frequently in intrahepatic cholangiocarcinomas and share hypermethylation targets with glioblastomas.
-
Mutations in the glucose-6-phosphatase gene are associated with glycogen storage disease types 1a and 1aSP but not 1b and 1c.
-
Mutations of the Ki-ras oncogene in endometrial carcinoma.
-
Myotilin is mutated in limb girdle muscular dystrophy 1A.
-
NPAS3 is a trachealess homolog critical for lung development and homeostasis.
-
Nanopore Flongle Sequencing as a Rapid, Single-Specimen Clinical Test for Fusion Detection.
-
Nanopore sequencing of complex genomic rearrangements in yeast reveals mechanisms of repeat-mediated double-strand break repair.
-
National Cancer Institute Prostate Cancer Genetics Workshop.
-
Natural IgM is produced by CD5- plasma cells that occupy a distinct survival niche in bone marrow.
-
Nature and distribution of large sequence polymorphisms in Saccharomyces cerevisiae.
-
Neutralization activity in a geographically diverse East London cohort of human immunodeficiency virus type 1-infected patients: clade C infection results in a stronger and broader humoral immune response than clade B infection.
-
New Member of the V1V2-Directed CAP256-VRC26 Lineage That Shows Increased Breadth and Exceptional Potency.
-
New routes to targeted therapy of intrahepatic cholangiocarcinomas revealed by next-generation sequencing.
-
New simian immunodeficiency virus infecting De Brazza's monkeys (Cercopithecus neglectus): evidence for a cercopithecus monkey virus clade.
-
New species and distribution records for Clavulina (Cantharellales, Basidiomycota) from the Guiana Shield, with a key to the lowland neotropical taxa.
-
New species of Xerocomus (Boletales) from the Guiana Shield, with notes on their mycorrhizal status and fruiting occurrence
-
New techniques for DNA sequence classification.
-
Newborns of obese parents have altered DNA methylation patterns at imprinted genes.
-
Next-Generation Sequencing Concordance Analysis of Comprehensive Solid Tumor Profiling between a Centralized Specialty Laboratory and the Decentralized Personal Genome Diagnostics elio Tissue Complete Kitted Solution.
-
Next-generation genotyping of hypervariable loci in many individuals of a non-model species: technical and theoretical implications.
-
Next-generation sequencing of the human olfactory receptors.
-
Next‐generation polyploid phylogenetics: Rapid resolution of hybrid polyploid complexes using PacBio single‐molecule sequencing
-
No evidence for maternal-fetal microchimerism in infantile hemangioma: a molecular genetic investigation.
-
No evidence for the presence of genetic variants predisposing to psychotic disorders on the non-deleted 22q11.2 allele of VCFS patients.
-
Nonmuscle myosin II generates forces that transmit tension and drive contraction in multiple tissues during dorsal closure.
-
Novel Insights into Chromosome Evolution in Birds, Archosaurs, and Reptiles.
-
Novel associations of UDP-glucuronosyltransferase 2B gene variants with prostate cancer risk in a multiethnic study.
-
Novel circular DNA viruses in stool samples of wild-living chimpanzees.
-
Novel enriched pathways in superficial malignant peripheral nerve sheath tumours and spindle/desmoplastic melanomas.
-
Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian Ocean.
-
Novel intronic DICER1 variation associated with pleuropulmonary blastoma in two siblings.
-
Novel taxa of thermally dimorphic systemic pathogens in the Ajellomycetaceae (Onygenales).
-
Nucleic Acid Databases and Molecular-Scale Computing.
-
O6-Methylguanine DNA Methyltransferase Status Does Not Predict Response or Resistance to Alkylating Agents in Well-Differentiated Pancreatic Neuroendocrine Tumors.
-
Observation of dually decoded regions of the human genome using ribosome profiling data.
-
Obtaining mtDNA genomes from next-generation transcriptome sequencing: a case study on the basal Passerida (Aves: Passeriformes) phylogeny.
-
Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida.
-
Oncogenic CARD11 mutations in human diffuse large B cell lymphoma.
-
One haploid parent contributes 100% of the gene pool for a widespread species in northwest North America.
-
One nutritional symbiosis begat another: phylogenetic evidence that the ant tribe Camponotini acquired Blochmannia by tending sap-feeding insects.
-
One species or at least eight? Delimitation and distribution of Frullania tamarisci (L.) Dumort. s. l. (Jungermanniopsida, Porellales) inferred from nuclear and chloroplast DNA markers.
-
Ontogenetic Differences in Dietary Fat Influence Microbiota Assembly in the Zebrafish Gut.
-
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity.
-
Organellar phylogenomics of an emerging model system: Sphagnum (peatmoss).
-
Organization and evolutionary trajectory of the mating type (MAT) locus in dermatophyte and dimorphic fungal pathogens.
-
Organization of carboxysome genes in the thiobacilli.
-
Organization of the MASP2 locus and its expression profile in mouse and rat.
-
Origin and evolution of HIV-1 in breast milk determined by single-genome amplification and sequencing.
-
Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes.
-
Ovarian cycling and reproductive state shape the vaginal microbiota in wild baboons.
-
POWRS: position-sensitive motif discovery.
-
PSORS2 is due to mutations in CARD14.
-
Paediatric leukaemia DNA methylation profiling using MBD enrichment and SOLiD sequencing on archival bone marrow smears.
-
Paired-end analysis of transcription start sites in Arabidopsis reveals plant-specific promoter signatures.
-
Parallel acceleration of evolutionary rates in symbiont genes underlying host nutrition.
-
Partial resistance to infection by R5X4 primary HIV type 1 isolates in an exposed-uninfected individual homozygous for CCR5 32-base pair deletion.
-
Patterns of gut bacterial colonization in three primate species.
-
Patterns of nucleotide diversity in two species of Mimulus are affected by mating system and asymmetric introgression.
-
Peatmoss (Sphagnum) diversification associated with Miocene Northern Hemisphere climatic cooling?
-
Pembrolizumab in men with heavily treated metastatic castrate-resistant prostate cancer.
-
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
-
Pervasive migration across rainforest and sandy coastal plain Aechmea nudicaulis (Bromeliaceae) populations despite contrasting environmental conditions.
-
Phenotypic properties of transmitted founder HIV-1.
-
Phospholipid-binding protein Cts1 controls septation and functions coordinately with calcineurin in Cryptococcus neoformans.
-
Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome.
-
Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota).
-
Phylogenetic analyses of eurotiomycetous endophytes reveal their close affinities to Chaetothyriales, Eurotiales, and a new order - Phaeomoniellales.
-
Phylogenetic analyses of morphological evolution in the gametophyte and sporophyte generations of the moss order Hookeriales (Bryopsida).
-
Phylogenetic analysis of protease and transmembrane region of HIV type 1 group O.
-
Phylogenetic analysis of viridans group streptococci causing endocarditis.
-
Phylogenetic and biogeographic relationships of eastern Asian and eastern North American disjunct Suillus species (fungi) as inferred from nuclear ribosomal RNA ITS sequences.
-
Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: a case study of the Lecanoromycetes (Ascomycota).
-
Phylogenetic evidence of a rapid radiation of pleurocarpous mosses (Bryophyta).
-
Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes).
-
Phylogenetic relationships of Rhizoctonia fungi within the Cantharellales.
-
Phylogenetic relationships, host affinity, and geographic structure of boreal and arctic endophytes from three major plant lineages.
-
Phylogenetic relationships, morphological incongruence, and geographic speciation in the fontinalaceae (Bryophyta).
-
Phylogenomic inferences from reference-mapped and de novo assembled short-read sequence data using RADseq sequencing of California white oaks (Quercus section Quercus).
-
Phylogenomics reveals a complex evolutionary history of lobed-leaf white oaks in western North America.
-
Phylogeny and biogeography of East Asian evergreen oaks (Quercus section Cyclobalanopsis; Fagaceae): Insights into the Cenozoic history of evergreen broad-leaved forests in subtropical Asia.
-
Phylogeny and biogeography of the American live oaks (Quercus subsection Virentes): a genomic and population genetics approach.
-
Phylogeny and evolution of Malagasy plated lizards.
-
Phylogeny and taxonomy of the family Arthrodermataceae (dermatophytes) using sequence analysis of the ribosomal ITS region.
-
Phylogeny of the Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits.
-
Phylogeny of the leafy liverwort Ptilidium: cryptic speciation and shared haplotypes between the Northern and Southern Hemispheres.
-
Phylogeny, biogeography, and processes of molecular differentiation in Quercus subgenus Quercus (Fagaceae).
-
Phylogeography of the Solanaceae-infecting Basidiomycota fungus Rhizoctonia solani AG-3 based on sequence analysis of two nuclear DNA loci.
-
Physical maps for genome analysis of serotype A and D strains of the fungal pathogen Cryptococcus neoformans.
-
Picoliter DNA sequencing chemistry on an electrowetting-based digital microfluidic platform.
-
Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants.
-
Points to consider in the reevaluation and reanalysis of genomic test results: a statement of the American College of Medical Genetics and Genomics (ACMG).
-
Polymorphic markers of the glycogen debranching enzyme gene allowing linkage analysis in families with glycogen storage disease type III.
-
Polymorphisms in Fibronectin Binding Proteins A and B among Staphylococcus aureus Bloodstream Isolates Are Not Associated with Arthroplasty Infection.
-
Polyphasic characterization of four soil-derived phenanthrene-degrading Acidovorax strains and proposal of Acidovorax carolinensis sp. nov.
-
Pooled deep sequencing of Plasmodium falciparum isolates: an efficient and scalable tool to quantify prevailing malaria drug-resistance genotypes.
-
Population history in Arabidopsis halleri using multilocus analysis.
-
Positional clustering improves computational binding site detection and identifies novel cis-regulatory sites in mammalian GABAA receptor subunit genes.
-
Positive selection driving diversification in plant secondary metabolism.
-
Positive selection on MMP3 regulation has shaped heart disease risk.
-
Post hoc Analysis for Detecting Individual Rare Variant Risk Associations Using Probit Regression Bayesian Variable Selection Methods in Case-Control Sequencing Studies.
-
Post-Austronesian migrational wave of West Polynesians to Micronesia.
-
Potential of whole-genome sequencing for determining risk and personalizing therapy: focus on AML.
-
Practical Treatment Strategies and Future Directions After Progression While Receiving CDK4/6 Inhibition and Endocrine Therapy in Advanced HR+/HER2- Breast Cancer.
-
Practical considerations in the clinical application of whole-exome sequencing.
-
Precise localization of the FHIT gene to the common fragile site at 3p14.2 (FRA3B) and characterization of homozygous deletions within FRA3B that affect FHIT transcription in tumor cell lines.
-
Precise mapping of recombination breakpoints suggests a common parent of two BC recombinant HIV type 1 strains circulating in China.
-
Precise spatio-temporal regulation of the anthocyanin biosynthetic pathway leads to petal spot formation in Clarkia gracilis (Onagraceae).
-
Prediction of HIV Transmission Cluster Growth With Statewide Surveillance Data.
-
Prediction of genome-wide DNA methylation in repetitive elements.
-
Pregnancy without progesterone in horses defines a second endogenous biopotent progesterone receptor agonist, 5α-dihydroprogesterone.
-
Preparation, resonance assignment, and preliminary dynamics characterization of residue specific 13C/15N-labeled elongated DNA for the study of sequence-directed dynamics by NMR.
-
Presence of diverse human immunodeficiency virus type 1 viral variants in Cameroon.
-
Prevalence and genetic diversity of coronaviruses in bats from China.
-
Prevalence of deleterious ATM germline mutations in gastric cancer patients.
-
Prevalence of hepatitis B antiviral drug resistance variants in North American patients with chronic hepatitis B not receiving antiviral treatment.
-
Prochlorococcus ecotype abundances in the North Atlantic Ocean as revealed by an improved quantitative PCR method.
-
Progressive island colonization and ancient origin of Hawaiian Metrosideros (Myrtaceae).
-
Promoter prediction on a genomic scale--the Adh experience.
-
Protection afforded by an HIV vaccine candidate in macaques depends on the dose of SIVmac251 at challenge exposure.
-
Quantitating the multiplicity of infection with human immunodeficiency virus type 1 subtype C reveals a non-poisson distribution of transmitted variants.
-
RADseq data reveal a lack of admixture in a mouse lemur contact zone contrary to previous microsatellite results.
-
RGSZ1, a Gz-selective regulator of G protein signaling whose action is sensitive to the phosphorylation state of Gzalpha.
-
ROR alpha augments thyroid hormone receptor-mediated transcriptional activation.
-
Rank order metrics for quantifying the association of sequence features with gene regulation.
-
Rapid DNA sequencing of more than 1000 bases per run by capillary electrophoresis using replaceable linear polyacrylamide solutions.
-
Rapid mapping of insertional mutations to probe cell wall regulation in Cryptococcus neoformans.
-
Rare codons regulate KRas oncogenesis.
-
Reading, writing, and modulating genetic information with boranophosphate mimics of nucleotides, DNA, and RNA.
-
Realizing the opportunities of genomics in health care.
-
Recombination between palindromes P5 and P1 on the human Y chromosome causes massive deletions and spermatogenic failure.
-
Reconstructing the temporal ordering of biological samples using microarray data.
-
Refinement of the PARK3 locus on chromosome 2p13 and the analysis of 14 candidate genes.
-
Refugial isolation and range expansions drive the genetic structure of Oxyria sinensis (Polygonaceae) in the Himalaya-Hengduan Mountains.
-
Regional clustering of shared neutralization determinants on primary isolates of clade C human immunodeficiency virus type 1 from South Africa.
-
Regulation of basement membrane-reactive B cells in BXSB, (NZBxNZW)F1, NZB, and MRL/lpr lupus mice.
-
Regulation of cytochrome c oxidase subunit 1 (COX1) expression in Cryptococcus neoformans by temperature and host environment.
-
Relaxed constraint and evolutionary rate variation between basic helix-loop-helix floral anthocyanin regulators in Ipomoea.
-
Remarkably little variation in proteins encoded by the Y chromosome's single-copy genes, implying effective purifying selection.
-
Removal of polymerase-produced mutant sequences from PCR products.
-
Repeated phenotypic changes highlight molecular targets of convergent evolution.
-
Replication of the recessive STBMS1 locus but with dominant inheritance.
-
Report and abstracts of the sixth international workshop on human chromosome 1 mapping 2000. Iowa City, Iowa, USA. 30 September-3 October 2000.
-
Report and abstracts of the third international workshop on human chromosome 1 mapping 1997.
-
Report of the fifth international workshop on human chromosome 1 mapping 1999.
-
Resistance mechanisms for the Bruton's tyrosine kinase inhibitor ibrutinib.
-
Resistance mutations at the lipid substrate binding site of Plasmodium falciparum protein farnesyltransferase.
-
Responses of soil cellulolytic fungal communities to elevated atmospheric CO₂ are complex and variable across five ecosystems.
-
Reversion and T cell escape mutations compensate the fitness loss of a CD8+ T cell escape mutant in their cognate transmitted/founder virus.
-
Revolution and renaissance.
-
RoBo-1, a novel member of the urokinase plasminogen activator receptor/CD59/Ly-6/snake toxin family selectively expressed in rat bone and growth plate cartilage.
-
Role of Cdc42p in pheromone-stimulated signal transduction in Saccharomyces cerevisiae.
-
Role of Escherichia coli DNA polymerase I in conferring viability upon the dnaN159 mutant strain.
-
Role of the angiotensin type 2 receptor gene in congenital anomalies of the kidney and urinary tract, CAKUT, of mice and men.
-
SCAR, a WASP-related protein, isolated as a suppressor of receptor defects in late Dictyostelium development.
-
SIV-induced instability of the chimpanzee gut microbiome.
-
SLC6A4 variation and citalopram response.
-
SNP-skimming: A fast approach to map loci generating quantitative variation in natural populations.
-
SNPselector: a web tool for selecting SNPs for genetic association studies.
-
SVA: software for annotating and visualizing sequenced human genomes.
-
Sakacin P non-producing Lactobacillus sakei strains contain homologues of the sakacin P gene cluster.
-
Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines.
-
Screening of 181 Patients With Antibody Deficiency for Deficiency of Adenosine Deaminase 2 Sheds New Light on the Disease in Adulthood.
-
Screening of basidiomycetes and xylariaceous fungi for lignin peroxidase and laccase gene-specific sequences.
-
Screening of blood donors for sickle cell trait using a DNA-based approach: Frequency in a multiethnic donor population.
-
Screening the human exome: a comparison of whole genome and whole transcriptome sequencing.
-
Scythe: a novel reaper-binding apoptotic regulator.
-
Selective sweeps and intercontinental migration in the cosmopolitan moss Ceratodon purpureus (Hedw.) Brid.
-
Self-reported prenatal tobacco smoke exposure, AXL gene-body methylation, and childhood asthma phenotypes.
-
Semi-automated assembly of high-quality diploid human reference genomes.
-
Sensitivity of the ViroSeq HIV-1 genotyping system for detection of the K103N resistance mutation in HIV-1 subtypes A, C, and D.
-
SeqSIMLA2: simulating correlated quantitative traits accounting for shared environmental effects in user-specified pedigree structure.
-
Sequence analysis and insertional inactivation of a gene encoding Moraxella sp. CK-1 cell wall hydrolase.
-
Sequence analysis of a cDNA for lysyl hydroxylase isolated from human skin fibroblasts from a normal donor: differences from human placental lysyl hydroxylase cDNA.
-
Sequence features of DNA binding sites reveal structural class of associated transcription factor.
-
Sequence length required for homologous recombination in Cryptococcus neoformans.
-
Sequence specificity incompletely defines the genome-wide occupancy of Myc.
-
Sequence variants in the transforming growth beta-induced factor (TGIF) gene are not associated with high myopia.
-
Sequence-Based Screening of Patients With Idiopathic Polyarteritis Nodosa, Granulomatosis With Polyangiitis, and Microscopic Polyangiitis for Deleterious Genetic Variants in ADA2.
-
Sequence-based differentiation of strains in the Mycobacterium avium complex.
-
Sequence-independent method for in vitro generation of nested deletions for sequencing large DNA fragments.
-
Sequencing analysis of the ATOH7 gene in individuals with optic nerve hypoplasia.
-
Sequencing and analysis of genomic fragments from the NF1 locus.
-
Sequencing of 640,000 exomes identifies GPR75 variants associated with protection from obesity.
-
Sequencing of double-stranded polymerase chain reaction products for mutation analysis.
-
Sequencing studies in human genetics: design and interpretation.
-
Sequencing the mouse Y chromosome reveals convergent gene acquisition and amplification on both sex chromosomes.
-
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes.
-
She Loves Me, She Loves Me Not: On the Dualistic Asexual/Sexual Nature of Dermatophyte Fungi.
-
Short communication: HIV type 1 subtype C variants transmitted through the bottleneck of breastfeeding are sensitive to new generation broadly neutralizing antibodies directed against quaternary and CD4-binding site epitopes.
-
Signaling activities of the Drosophila wingless gene are separately mutable and appear to be transduced at the cell surface.
-
Simultaneous detection of major drug resistance mutations in the protease and reverse transcriptase genes for HIV-1 subtype C by use of a multiplex allele-specific assay.
-
Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays.
-
Site-specific retinoic acid production in the brain of adult songbirds.
-
Slow algae, fast fungi: exceptionally high nucleotide substitution rate differences between lichenized fungi Omphalina and their symbiotic green algae Coccomyxa.
-
Social networks predict gut microbiome composition in wild baboons.
-
Somatic Mutation Allelic Ratio Test Using ddPCR (SMART-ddPCR): An Accurate Method for Assessment of Preferential Allelic Imbalance in Tumor DNA.
-
SpA: web-accessible spectratype analysis: data management, statistical analysis and visualization.
-
Species delimitation and biogeography of a southern hemisphere liverwort clade, Frullania subgenus Microfrullania (Frullaniaceae, Marchantiophyta).
-
Species delimitation in lemurs: multiple genetic loci reveal low levels of species diversity in the genus Cheirogaleus.
-
Species discovery and validation in a cryptic radiation of endangered primates: coalescent-based species delimitation in Madagascar's mouse lemurs.
-
Specific polymorphisms in hepatitis C virus genotype 3 core protein associated with intracellular lipid accumulation.
-
Sperm DNA methylation altered by THC and nicotine: Vulnerability of neurodevelopmental genes with bivalent chromatin.
-
Spider genomes provide insight into composition and evolution of venom and silk.
-
Stabilization of microsatellite sequences by variant repeats in the yeast Saccharomyces cerevisiae.
-
Standards recommendations for the Earth BioGenome Project.
-
Statistical analysis of genetic interactions in Tn-Seq data.
-
Strain-Specific V3 and CD4 Binding Site Autologous HIV-1 Neutralizing Antibodies Select Neutralization-Resistant Viruses.
-
Stratified whole genome linkage analysis of Chiari type I malformation implicates known Klippel-Feil syndrome genes as putative disease candidates.
-
Structure of the genes encoding transcription factor IIB and TATA box-binding protein from Drosophila melanogaster.
-
Structure, function, and phylogeny of the mating locus in the Rhizopus oryzae complex.
-
Structure-guided reprogramming of serine recombinase DNA sequence specificity.
-
Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility.
-
Sturge-Weber syndrome and port-wine stains caused by somatic mutation in GNAQ.
-
Successful diagnosis of HIBCH deficiency from exome sequencing and positive retrospective analysis of newborn screening cards in two siblings presenting with Leigh's disease.
-
Superoxide dismutase influences the virulence of Cryptococcus neoformans by affecting growth within macrophages.
-
Surface-enhanced Raman gene probes.
-
Survey of corticioid fungi in North American pinaceous forests reveals hyperdiversity, underpopulated sequence databases, and species that are potentially ectomycorrhizal.
-
Survey of variation in human transcription factors reveals prevalent DNA binding changes.
-
Sustained elite suppression of replication competent HIV-1 in a patient treated with rituximab based chemotherapy.
-
Sympatric parallel diversification of major oak clades in the Americas and the origins of Mexican species diversity.
-
Synchronous luminescence: a new detection technique for multiple fluorescent probes used for DNA sequencing.
-
Syndrome of hepatic cirrhosis, dystonia, polycythemia, and hypermanganesemia caused by mutations in SLC30A10, a manganese transporter in man.
-
Synonymous codon usage analysis of hand, foot and mouth disease viruses: A comparative study on coxsackievirus A6, A10, A16, and enterovirus 71 from 2008 to 2015.
-
Systematics of the genus Chaetosphaeria and its allied genera: morphological and phylogenetic diversity in north temperate and neotropical taxa.
-
TM4SF20 ancestral deletion and susceptibility to a pediatric disorder of early language delay and cerebral white matter hyperintensities.
-
TNXB mutations can cause vesicoureteral reflux.
-
Targeted Genome Sequencing Identifies Multiple Rare Variants in Caveolin-1 Associated with Obstructive Sleep Apnea.
-
Targeted Re-Sequencing Emulsion PCR Panel for Myopathies: Results in 94 Cases.
-
Targeted long-read sequencing identifies missing disease-causing variation.
-
Targeted sequencing in chromosome 17q linkage region identifies familial glioma candidates in the Gliogene Consortium.
-
Telaprevir for previously untreated chronic hepatitis C virus infection.
-
Temporal Stability of Molecular Diversity Measures in Natural Populations of Drosophila pseudoobscura and Drosophila persimilis.
-
Testing Rare-Variant Association without Calling Genotypes Allows for Systematic Differences in Sequencing between Cases and Controls.
-
Testing for divergent transmission histories among cultural characters: a study using Bayesian phylogenetic methods and Iranian tribal textile data.
-
Testing morphological concepts of orders of pleurocarpous mosses (Bryophyta) using phylogenetic reconstructions based on TRNL-TRNF and RPS4 sequences.
-
Testing the effect of rare compound-heterozygous and recessive mutations in case--parent sequencing studies.
-
The A581G Mutation in the Gene Encoding Plasmodium falciparum Dihydropteroate Synthetase Reduces the Effectiveness of Sulfadoxine-Pyrimethamine Preventive Therapy in Malawian Pregnant Women.
-
The AZFc region of the Y chromosome features massive palindromes and uniform recurrent deletions in infertile men.
-
The Arabidopsis NPR1 gene that controls systemic acquired resistance encodes a novel protein containing ankyrin repeats.
-
The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome.
-
The Cryptococcus neoformans genome sequencing project.
-
The DNA methylation landscape of advanced prostate cancer.
-
The DNA sequence and biological annotation of human chromosome 1.
-
The DNA sequence of the human X chromosome.
-
The Drosophila Tis11 protein and its effects on mRNA expression in flies.
-
The ENCODE (ENCyclopedia Of DNA Elements) Project.
-
The GroES antigens of Mycobacterium avium and Mycobacterium paratuberculosis.
-
The Human Pangenome Project: a global resource to map genomic diversity.
-
The ICP0 protein of equine herpesvirus 1 is an early protein that independently transactivates expression of all classes of viral promoters.
-
The Influenza B Virus Hemagglutinin Head Domain Is Less Tolerant to Transposon Mutagenesis than That of the Influenza A Virus.
-
The LabFlow system for workflow management in large scale biology research laboratories.
-
The MedSeq Project: a randomized trial of integrating whole genome sequencing into clinical medicine.
-
The Pleistocene history of the sheepshead minnow (Cyprinodon variegatus): Non-equilibrium evolutionary dynamics within a diversifying species complex.
-
The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome.
-
The Pseudomonas syringae pv. tomato HrpW protein has domains similar to harpins and pectate lyases and can elicit the plant hypersensitive response and bind to pectate.
-
The RAM1 gene encoding a protein-farnesyltransferase beta-subunit homologue is essential in Cryptococcus neoformans.
-
The RNase P associated with HeLa cell mitochondria contains an essential RNA component identical in sequence to that of the nuclear RNase P.
-
The Spatial Factor, Rather than Elevated CO(2), Controls the Soil Bacterial Community in a Temperate Forest Ecosystem
-
The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project.
-
The adaptive radiation of lichen-forming Teloschistaceae is associated with sunscreening pigments and a bark-to-rock substrate shift.
-
The calmodulin-dependent protein phosphatase catalytic subunit (calcineurin A) is an essential gene in Aspergillus nidulans.
-
The calmodulin-dependent protein phosphatase catalytic subunit (calcineurin A) is an essential gene in Aspergillus nidulans.
-
The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods.
-
The characterization of twenty sequenced human genomes.
-
The complete sequence of a human genome.
-
The dangers of diagnostic monopolies.
-
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
-
The earliest stages of adaptation in an experimental plant population: strong selection on QTLs for seed dormancy.
-
The effect of sequence context on spontaneous Polzeta-dependent mutagenesis in Saccharomyces cerevisiae.
-
The effects of Cenozoic global change on squirrel phylogeny.
-
The evolution of homing endonuclease genes and group I introns in nuclear rDNA.
-
The evolutionary forest algorithm.
-
The evolutionary history of ferns inferred from 25 low‐copy nuclear genes
-
The extent and genetic basis of phenotypic divergence in life history traits in Mimulus guttatus.
-
The founding of Mauritian endemic coffee trees by a synchronous long-distance dispersal event.
-
The genetic landscape of mutations in Burkitt lymphoma.
-
The genetic landscape of the childhood cancer medulloblastoma.
-
The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans.
-
The genome of the sea urchin Stongylocentrotus purpuratus
-
The genomic consequences of adaptive divergence and reproductive isolation between species of manakins.
-
The genomic landscape of mantle cell lymphoma is related to the epigenetically determined chromatin state of normal B cells.
-
The genomics of speciation in Drosophila: diversity, divergence, and introgression estimated using low-coverage genome sequencing.
-
The human gene for the type III isozyme of hexokinase: structure, basal promoter, and evolution.
-
The lemur revolution starts now: the genomic coming of age for a non-model organism.
-
The mammalian Rad24 homologous to yeast Saccharomyces cerevisiae Rad24 and Schizosaccharomyces pombe Rad17 is involved in DNA damage checkpoint.
-
The near-naked hairless (Hr(N)) mutation disrupts hair formation but is not due to a mutation in the Hairless coding region.
-
The predictive capacity of personal genome sequencing.
-
The reference genome sequence of Saccharomyces cerevisiae: then and now.
-
The same sequence variant on 9p21 associates with myocardial infarction, abdominal aortic aneurysm and intracranial aneurysm.
-
The sequence of the human genome.
-
The smallest membrane anchoring subunit (QPs3) of bovine heart mitochondrial succinate-ubiquinone reductase. Cloning, sequencing, topology, and Q-binding domain.
-
The spatial scale of genetic subdivision in populations of Ifremeria nautilei, a hydrothermal-vent gastropod from the southwest Pacific.
-
The trehalose synthesis pathway is an integral part of the virulence composite for Cryptococcus gattii.
-
The urinary microbiome in women with mixed urinary incontinence compared to similarly aged controls.
-
The use of genome sequencing to investigate an outbreak of hospital-acquired mucormycosis in transplant patients.
-
The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms.
-
The utility of the incongruence length difference test.
-
The utility of the traditional medical genetics diagnostic evaluation in the context of next-generation sequencing for undiagnosed genetic disorders.
-
The yeast carboxyl-terminal repeat domain kinase CTDK-I is a divergent cyclin-cyclin-dependent kinase complex.
-
Theoretical and practical advances in genome halving.
-
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.
-
Three-genome mosses: complex double allopolyploid origins for triploid gametophytes in Sphagnum.
-
Tigecycline therapy for carbapenem-resistant Klebsiella pneumoniae (CRKP) bacteriuria leads to tigecycline resistance.
-
Timing of complementary feeding is associated with gut microbiota diversity and composition and short chain fatty acid concentrations over the first year of life.
-
Tissue distribution and thyroid hormone effects on mRNA abundance for membrane transporters Mct8, Mct10, and organic anion-transporting polypeptides (Oatps) in a teleost fish.
-
Tissue storage and primer selection influence pyrosequencing-based inferences of diversity and community composition of endolichenic and endophytic fungi.
-
Total Synthesis of a Functional Designer Eukaryotic Chromosome
-
Toward a Wolbachia multilocus sequence typing system: discrimination of Wolbachia strains present in Drosophila species.
-
Toward deciphering the mechanistic role of variations in the Rep1 repeat site in the transcription regulation of SNCA gene.
-
Towards Quantitative Microbiome Community Profiling Using Internal Standards.
-
Towards a new classification of the Arthoniales (Ascomycota) based on a three-gene phylogeny focussing on the genus Opegrapha.
-
Transcriptome analysis of mouse stem cells and early embryos.
-
Transcriptome-mining for single-copy nuclear markers in ferns
-
Transformation of follicular lymphoma to precursor B-cell lymphoblastic lymphoma with c-myc gene rearrangement as a critical event.
-
Transient compartmentalization of simian immunodeficiency virus variants in the breast milk of african green monkeys.
-
Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing.
-
Treponema pallidum infection in the wild baboons of East Africa: distribution and genetic characterization of the strains responsible.
-
Trilateral retinoblastoma in a patient with Peutz-Jeghers syndrome.
-
Trio-based exome sequencing arrests de novo mutations in early-onset high myopia.
-
Truncating BRCA1 mutations are uncommon in a cohort of hereditary prostate cancer families with evidence of linkage to 17q markers.
-
Two new endophytic Atractiellomycetes, Atractidochium hillariae and Proceropycnis hameedii.
-
Type II collagen gene variants and inherited osteonecrosis of the femoral head.
-
Ultra-rare genetic variation in common epilepsies: a case-control sequencing study.
-
Unique expression of a sporophytic character on the gametophytes of notholaenid ferns (Pteridaceae).
-
Use of bioinformatic tools in primer validation.
-
Using ERDS to infer copy-number variants in high-coverage genomes.
-
Using a multigene phylogenetic analysis to assess generic delineation and character evolution in Verrucariaceae (Verrucariales, Ascomycota).
-
Using comparative genomic data to test for fast-X evolution.
-
VIAF, a conserved inhibitor of apoptosis (IAP)-interacting factor that modulates caspase activation.
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Vaccination with the immediate-early protein ICP47 of herpes simplex virus-type 1 (HSV-1) induces virus-specific lymphoproliferation, but fails to protect against lethal challenge.
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Variable but persistent coexistence of Prochlorococcus ecotypes along temperature gradients in the ocean's surface mixed layer.
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Variant ASGR1 Associated with a Reduced Risk of Coronary Artery Disease.
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Variants in CXCR4 associate with juvenile idiopathic arthritis susceptibility.
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Variants in melanocortin 1 receptor gene contribute to risk of melanoma--a direct sequencing analysis in a Texas population.
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Variation in GRM3 affects cognition, prefrontal glutamate, and risk for schizophrenia.
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VarioWatch: providing large-scale and comprehensive annotations on human genomic variants in the next generation sequencing era.
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Vibrio metoecus sp. nov., a close relative of Vibrio cholerae isolated from coastal brackish ponds and clinical specimens.
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Virome Analysis of Transfusion Recipients Reveals a Novel Human Virus That Shares Genomic Features with Hepaciviruses and Pegiviruses.
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Vironome of Kaposi sarcoma associated herpesvirus-inflammatory cytokine syndrome in an AIDS patient reveals co-infection of human herpesvirus 8 and human herpesvirus 6A.
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Virulence and DNA sequence analysis of Cronobacter spp. isolated from infant cereals.
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WASABI: an automated sequence processing system for multigene phylogenies.
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West Nile virus in Mexico: evidence of widespread circulation since July 2002.
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What can you do with 0.1x genome coverage? A case study based on a genome survey of the scuttle fly Megaselia scalaris (Phoridae).
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Whole genome re-sequencing to identify suppressor mutations of mutant and foreign Escherichia coli FtsZ.
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Whole genome sequencing identifies circulating Beijing-lineage Mycobacterium tuberculosis strains in Guatemala and an associated urban outbreak.
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Whole-exome sequencing implicates UBE3D in age-related macular degeneration in East Asian populations.
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Whole-genome analyses resolve early branches in the tree of life of modern birds.
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Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection.
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Whole-genome fingerprint of the DNA methylome during human B cell differentiation.
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Wide variation in the multiplicity of HIV-1 infection among injection drug users.
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Widespread false gene gains caused by duplication errors in genome assemblies.
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Working at the interface of phylogenetics and population genetics: a biogeographical analysis of Triaenops spp. (Chiroptera: Hipposideridae).
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Yantar, a conserved arginine-rich protein is involved in Drosophila hemocyte development.
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Yeast diversity sampling on the San Juan Islands reveals no evidence for the spread of the Vancouver Island Cryptococcus gattii outbreak to this locale.
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Young Investigator Challenge: Molecular testing in noninvasive follicular thyroid neoplasm with papillary-like nuclear features.
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alphaSU2, an epithelial integrin that binds laminin in the sea urchin embryo.
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cnvCapSeq: detecting copy number variation in long-range targeted resequencing data.
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hrp gene-dependent induction of hin1: a plant gene activated rapidly by both harpins and the avrPto gene-mediated signal.
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mirror encodes a novel PBX-class homeoprotein that functions in the definition of the dorsal-ventral border in the Drosophila eye.
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Keywords of People
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Alberts, Susan C.,
Robert F. Durden Distinguished Professor of Biology,
Duke Science & Society
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Bejsovec, Amy,
Associate Professor of Biology,
Biology
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Berchuck, Andrew,
James M. Ingram Distinguished Professor of Gynecologic Oncology,
Obstetrics and Gynecology, Gynecologic Oncology
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Buckley, Rebecca Hatcher,
Professor Emeritus of Pediatrics,
Pediatrics, Allergy and Immunology
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Erickson, Harold Paul,
Professor Emeritus of Cell Biology,
Cell Biology
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Gordan, Raluca Mihaela,
Associate Professor in Biostatistics & Bioinformatics,
Computer Science
-
Gunn, Michael Dee,
Professor of Medicine,
Immunology
-
Hartemink, Alexander J.,
Professor in the Department of Computer Science,
Biology
-
Hogan, Brigid L. M.,
Research Professor of Cell Biology,
Cell Biology
-
Li, Yi-Ju,
Professor of Biostatistics & Bioinformatics,
Biostatistics & Bioinformatics
-
Liu, Yutao,
Adjunct Assistant Professor in the Department of Medicine,
Medicine, Medical Genetics
-
McLendon, Roger Edwin,
Professor of Pathology,
Pathology
-
Mitchell-Olds, Thomas,
Newman Ivey White Distinguished Professor of Biology,
Biology
-
Noor, Mohamed A. F.,
Professor of Biology,
Duke Science & Society
-
Roth, V. Louise,
Professor of Biology,
Evolutionary Anthropology
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Shinohara, Mari L.,
Associate Professor of Immunology,
Cell Biology
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Wray, Gregory Allan,
Professor of Biology,
Evolutionary Anthropology
-
Yan, Hai,
Adjunct Professor of Pathology,
Pathology
-
Yoder, Anne Daphne,
Braxton Craven Distinguished Professor of Evolutionary Biology,
Duke Science & Society