Nucleotide Motifs
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Subject Areas on Research
- A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity.
- A potentially abundant junctional RNA motif stabilized by m6A and Mg2.
- A regulatory hierarchy controls the dynamic transcriptional response to extreme oxidative stress in archaea.
- An integrated map of genetic variation from 1,092 human genomes.
- Circular RNAs are abundant, conserved, and associated with ALU repeats.
- Computational analysis reveals a correlation of exon-skipping events with splicing, transcription and epigenetic factors.
- Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights.
- Different evolutionary pathways of HIV-1 between fetus and mother perinatal transmission pairs indicate unique immune selection in fetuses.
- Differential regulation of genes by retrotransposons in rice promoters.
- Differentiation and classification of RNA motifs using small molecule-based pattern recognition.
- Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.
- Divergence in DNA Specificity among Paralogous Transcription Factors Contributes to Their Differential In Vivo Binding.
- Epigenetic alterations in cytochrome P450 oxidoreductase (Por) in sperm of rats exposed to tetrahydrocannabinol (THC).
- Explicit DNase sequence bias modeling enables high-resolution transcription factor footprint detection.
- Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection.
- Genome-wide analysis reveals positional-nucleosome-oriented binding pattern of pioneer factor FOXA1.
- Genomic regions flanking E-box binding sites influence DNA binding specificity of bHLH transcription factors through DNA shape.
- Global translational reprogramming is a fundamental layer of immune regulation in plants.
- Glucocorticoid receptor recruits to enhancers and drives activation by motif-directed binding.
- K12/SECTM1, an interferon-γ regulated molecule, synergizes with CD28 to costimulate human T cell proliferation.
- Loss of Arf4 causes severe degeneration of the exocrine pancreas but not cystic kidney disease or retinal degeneration.
- Mapping nucleosome positions using DNase-seq.
- Paired-end analysis of transcription start sites in Arabidopsis reveals plant-specific promoter signatures.
- Protein-DNA binding in the absence of specific base-pair recognition.
- Resolving Heart Regeneration by Replacement Histone Profiling.
- TFBSshape: a motif database for DNA shape features of transcription factor binding sites.
- The DEAH-box RNA helicase RHAU binds an intramolecular RNA G-quadruplex in TERC and associates with telomerase holoenzyme.
- Unveiling Inherent Degeneracies in Determining Population-Weighted Ensembles of Interdomain Orientational Distributions Using NMR Residual Dipolar Couplings: Application to RNA Helix Junction Helix Motifs.
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Keywords of People
- Wray, Gregory Allan, Professor of Biology, Evolutionary Anthropology