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Functional genomics approach for the identification of human host factors supporting dengue viral propagation.

Publication ,  Journal Article
Barrows, NJ; Jamison, SF; Bradrick, SS; Le Sommer, C; Kim, SY; Pearson, J; Garcia-Blanco, MA
Published in: Methods Mol Biol
2014

Dengue virus (DENV) is endemic throughout tropical regions of the world and there are no approved treatments or anti-transmission agents currently available. Consequently, there exists an enormous unmet need to treat the human diseases caused by DENV and block viral transmission by the mosquito vector. RNAi screening represents an efficient method to expand the pool of known host factors that could become viable targets for treatments or provide rationale to consider available drugs as anti-DENV treatments. We developed a high-throughput siRNA-based screening protocol that can identify human DENV host factors. The protocol herein describes the materials and the procedures necessary to screen a human cell line in order to identify genes which are either necessary for or restrict DENV propagation at any stage in the viral life cycle.

Duke Scholars

Published In

Methods Mol Biol

DOI

EISSN

1940-6029

Publication Date

2014

Volume

1138

Start / End Page

285 / 299

Location

United States

Related Subject Headings

  • Virus Replication
  • Transfection
  • Humans
  • Host-Derived Cellular Factors
  • Genomics
  • Developmental Biology
  • Dengue Virus
  • Dengue
  • Cell Line, Tumor
  • 3404 Medicinal and biomolecular chemistry
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Barrows, N. J., Jamison, S. F., Bradrick, S. S., Le Sommer, C., Kim, S. Y., Pearson, J., & Garcia-Blanco, M. A. (2014). Functional genomics approach for the identification of human host factors supporting dengue viral propagation. Methods Mol Biol, 1138, 285–299. https://doi.org/10.1007/978-1-4939-0348-1_18
Barrows, Nicholas J., Sharon F. Jamison, Shelton S. Bradrick, Caroline Le Sommer, So Young Kim, James Pearson, and Mariano A. Garcia-Blanco. “Functional genomics approach for the identification of human host factors supporting dengue viral propagation.Methods Mol Biol 1138 (2014): 285–99. https://doi.org/10.1007/978-1-4939-0348-1_18.
Barrows NJ, Jamison SF, Bradrick SS, Le Sommer C, Kim SY, Pearson J, et al. Functional genomics approach for the identification of human host factors supporting dengue viral propagation. Methods Mol Biol. 2014;1138:285–99.
Barrows, Nicholas J., et al. “Functional genomics approach for the identification of human host factors supporting dengue viral propagation.Methods Mol Biol, vol. 1138, 2014, pp. 285–99. Pubmed, doi:10.1007/978-1-4939-0348-1_18.
Barrows NJ, Jamison SF, Bradrick SS, Le Sommer C, Kim SY, Pearson J, Garcia-Blanco MA. Functional genomics approach for the identification of human host factors supporting dengue viral propagation. Methods Mol Biol. 2014;1138:285–299.

Published In

Methods Mol Biol

DOI

EISSN

1940-6029

Publication Date

2014

Volume

1138

Start / End Page

285 / 299

Location

United States

Related Subject Headings

  • Virus Replication
  • Transfection
  • Humans
  • Host-Derived Cellular Factors
  • Genomics
  • Developmental Biology
  • Dengue Virus
  • Dengue
  • Cell Line, Tumor
  • 3404 Medicinal and biomolecular chemistry