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Biological and analytical stability of a peripheral blood gene expression score for obstructive coronary artery disease in the PREDICT and COMPASS studies.

Publication ,  Journal Article
Daniels, SE; Beineke, P; Rhees, B; McPherson, JA; Kraus, WE; Thomas, GS; Rosenberg, S
Published in: J Cardiovasc Transl Res
October 2014

A gene expression score (GES) for obstructive coronary artery disease (CAD) has been validated in two multicenter studies. Receiver-operating characteristics (ROC) analysis of the GES on an expanded Personalized Risk Evaluation and Diagnosis in the Coronary Tree (PREDICT) cohort (NCT no. 00500617) with CAD defined by quantitative coronary angiography (QCA) or clinical reads yielded similar performance (area under the curve (AUC)=0.70, N=1,502) to the original validation cohort (AUC=0.70, N=526). Analysis of 138 non-Caucasian and 1,364 Caucasian patients showed very similar performance (AUCs=0.72 vs. 0.70). To assess analytic stability, stored samples of the original validation cohort (N=526) was re-tested after 5 years, and the mean score changed from 20.3 to 19.8 after 5 years (N=501, 95 %). To assess patient scores over time, GES was determined on samples from 173 Coronary Obstruction Detection by Molecular Personalized Gene Expression (COMPASS) study (NCT no. 01117506) patients at approximately 1 year post-enrollment. Mean scores increased slightly from 15.9 to 17.3, corresponding to a 2.5 % increase in obstructive CAD likelihood. Changes in cardiovascular medications did not show a significant change in GES.

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Published In

J Cardiovasc Transl Res

DOI

EISSN

1937-5395

Publication Date

October 2014

Volume

7

Issue

7

Start / End Page

615 / 622

Location

United States

Related Subject Headings

  • White People
  • Tomography, X-Ray Computed
  • Time Factors
  • Reproducibility of Results
  • Real-Time Polymerase Chain Reaction
  • ROC Curve
  • RNA Stability
  • Predictive Value of Tests
  • Middle Aged
  • Male
 

Citation

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Daniels, S. E., Beineke, P., Rhees, B., McPherson, J. A., Kraus, W. E., Thomas, G. S., & Rosenberg, S. (2014). Biological and analytical stability of a peripheral blood gene expression score for obstructive coronary artery disease in the PREDICT and COMPASS studies. J Cardiovasc Transl Res, 7(7), 615–622. https://doi.org/10.1007/s12265-014-9583-3
Daniels, Susan E., Philip Beineke, Brian Rhees, John A. McPherson, William E. Kraus, Gregory S. Thomas, and Steven Rosenberg. “Biological and analytical stability of a peripheral blood gene expression score for obstructive coronary artery disease in the PREDICT and COMPASS studies.J Cardiovasc Transl Res 7, no. 7 (October 2014): 615–22. https://doi.org/10.1007/s12265-014-9583-3.
Daniels SE, Beineke P, Rhees B, McPherson JA, Kraus WE, Thomas GS, et al. Biological and analytical stability of a peripheral blood gene expression score for obstructive coronary artery disease in the PREDICT and COMPASS studies. J Cardiovasc Transl Res. 2014 Oct;7(7):615–22.
Daniels, Susan E., et al. “Biological and analytical stability of a peripheral blood gene expression score for obstructive coronary artery disease in the PREDICT and COMPASS studies.J Cardiovasc Transl Res, vol. 7, no. 7, Oct. 2014, pp. 615–22. Pubmed, doi:10.1007/s12265-014-9583-3.
Daniels SE, Beineke P, Rhees B, McPherson JA, Kraus WE, Thomas GS, Rosenberg S. Biological and analytical stability of a peripheral blood gene expression score for obstructive coronary artery disease in the PREDICT and COMPASS studies. J Cardiovasc Transl Res. 2014 Oct;7(7):615–622.
Journal cover image

Published In

J Cardiovasc Transl Res

DOI

EISSN

1937-5395

Publication Date

October 2014

Volume

7

Issue

7

Start / End Page

615 / 622

Location

United States

Related Subject Headings

  • White People
  • Tomography, X-Ray Computed
  • Time Factors
  • Reproducibility of Results
  • Real-Time Polymerase Chain Reaction
  • ROC Curve
  • RNA Stability
  • Predictive Value of Tests
  • Middle Aged
  • Male