Directed enzymatic activation of 1-D DNA tiles.

Published

Journal Article

The tile assembly model is a Turing universal model of self-assembly where a set of square shaped tiles with programmable sticky sides undergo coordinated self-assembly to form arbitrary shapes, thereby computing arbitrary functions. Activatable tiles are a theoretical extension to the Tile assembly model that enhances its robustness by protecting the sticky sides of tiles until a tile is partially incorporated into a growing assembly. In this article, we experimentally demonstrate a simplified version of the Activatable tile assembly model. In particular, we demonstrate the simultaneous assembly of protected DNA tiles where a set of inert tiles are activated via a DNA polymerase to undergo linear assembly. We then demonstrate stepwise activated assembly where a set of inert tiles are activated sequentially one after another as a result of attachment to a growing 1-D assembly. We hope that these results will pave the way for more sophisticated demonstrations of activated assemblies.

Full Text

Duke Authors

Cited Authors

  • Garg, S; Chandran, H; Gopalkrishnan, N; LaBean, TH; Reif, J

Published Date

  • February 9, 2015

Published In

Volume / Issue

  • 9 / 2

Start / End Page

  • 1072 - 1079

PubMed ID

  • 25625898

Pubmed Central ID

  • 25625898

Electronic International Standard Serial Number (EISSN)

  • 1936-086X

International Standard Serial Number (ISSN)

  • 1936-0851

Digital Object Identifier (DOI)

  • 10.1021/nn504556v

Language

  • eng