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The N-terminal Set-β Protein Isoform Induces Neuronal Death.

Publication ,  Journal Article
Trakhtenberg, EF; Morkin, MI; Patel, KH; Fernandez, SG; Sang, A; Shaw, P; Liu, X; Wang, Y; Mlacker, GM; Gao, H; Velmeshev, D; Dombrowski, SM ...
Published in: J Biol Chem
May 22, 2015

Set-β protein plays different roles in neurons, but the diversity of Set-β neuronal isoforms and their functions have not been characterized. The expression and subcellular localization of Set-β are altered in Alzheimer disease, cleavage of Set-β leads to neuronal death after stroke, and the full-length Set-β regulates retinal ganglion cell (RGC) and hippocampal neuron axon growth and regeneration in a subcellular localization-dependent manner. Here we used various biochemical approaches to investigate Set-β isoforms and their role in the CNS, using the same type of neurons, RGCs, across studies. We found multiple alternatively spliced isoforms expressed from the Set locus in purified RGCs. Set transcripts containing the Set-β-specific exon were the most highly expressed isoforms. We also identified a novel, alternatively spliced Set-β transcript lacking the nuclear localization signal and demonstrated that the full-length (∼39-kDa) Set-β is localized predominantly in the nucleus, whereas a shorter (∼25-kDa) Set-β isoform is localized predominantly in the cytoplasm. Finally, we show that an N-terminal Set-β cleavage product can induce neuronal death.

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Published In

J Biol Chem

DOI

EISSN

1083-351X

Publication Date

May 22, 2015

Volume

290

Issue

21

Start / End Page

13417 / 13426

Location

United States

Related Subject Headings

  • Reverse Transcriptase Polymerase Chain Reaction
  • Retinal Ganglion Cells
  • Real-Time Polymerase Chain Reaction
  • Rats, Sprague-Dawley
  • RNA, Messenger
  • Protein Isoforms
  • Oncogene Proteins
  • Nuclear Proteins
  • Neurons
  • Mice, Inbred C57BL
 

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Trakhtenberg, E. F., Morkin, M. I., Patel, K. H., Fernandez, S. G., Sang, A., Shaw, P., … Goldberg, J. L. (2015). The N-terminal Set-β Protein Isoform Induces Neuronal Death. J Biol Chem, 290(21), 13417–13426. https://doi.org/10.1074/jbc.M114.633883
Trakhtenberg, Ephraim F., Melina I. Morkin, Karan H. Patel, Stephanie G. Fernandez, Alan Sang, Peter Shaw, Xiongfei Liu, et al. “The N-terminal Set-β Protein Isoform Induces Neuronal Death.J Biol Chem 290, no. 21 (May 22, 2015): 13417–26. https://doi.org/10.1074/jbc.M114.633883.
Trakhtenberg EF, Morkin MI, Patel KH, Fernandez SG, Sang A, Shaw P, et al. The N-terminal Set-β Protein Isoform Induces Neuronal Death. J Biol Chem. 2015 May 22;290(21):13417–26.
Trakhtenberg, Ephraim F., et al. “The N-terminal Set-β Protein Isoform Induces Neuronal Death.J Biol Chem, vol. 290, no. 21, May 2015, pp. 13417–26. Pubmed, doi:10.1074/jbc.M114.633883.
Trakhtenberg EF, Morkin MI, Patel KH, Fernandez SG, Sang A, Shaw P, Liu X, Wang Y, Mlacker GM, Gao H, Velmeshev D, Dombrowski SM, Vitek MP, Goldberg JL. The N-terminal Set-β Protein Isoform Induces Neuronal Death. J Biol Chem. 2015 May 22;290(21):13417–13426.

Published In

J Biol Chem

DOI

EISSN

1083-351X

Publication Date

May 22, 2015

Volume

290

Issue

21

Start / End Page

13417 / 13426

Location

United States

Related Subject Headings

  • Reverse Transcriptase Polymerase Chain Reaction
  • Retinal Ganglion Cells
  • Real-Time Polymerase Chain Reaction
  • Rats, Sprague-Dawley
  • RNA, Messenger
  • Protein Isoforms
  • Oncogene Proteins
  • Nuclear Proteins
  • Neurons
  • Mice, Inbred C57BL