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WebDISCO: a web service for distributed cox model learning without patient-level data sharing.

Publication ,  Journal Article
Lu, C-L; Wang, S; Ji, Z; Wu, Y; Xiong, L; Jiang, X; Ohno-Machado, L
Published in: J Am Med Inform Assoc
November 2015

OBJECTIVE: The Cox proportional hazards model is a widely used method for analyzing survival data. To achieve sufficient statistical power in a survival analysis, it usually requires a large amount of data. Data sharing across institutions could be a potential workaround for providing this added power. METHODS AND MATERIALS: The authors develop a web service for distributed Cox model learning (WebDISCO), which focuses on the proof-of-concept and algorithm development for federated survival analysis. The sensitive patient-level data can be processed locally and only the less-sensitive intermediate statistics are exchanged to build a global Cox model. Mathematical derivation shows that the proposed distributed algorithm is identical to the centralized Cox model. RESULTS: The authors evaluated the proposed framework at the University of California, San Diego (UCSD), Emory, and Duke. The experimental results show that both distributed and centralized models result in near-identical model coefficients with differences in the range [Formula: see text] to [Formula: see text]. The results confirm the mathematical derivation and show that the implementation of the distributed model can achieve the same results as the centralized implementation. LIMITATION: The proposed method serves as a proof of concept, in which a publicly available dataset was used to evaluate the performance. The authors do not intend to suggest that this method can resolve policy and engineering issues related to the federated use of institutional data, but they should serve as evidence of the technical feasibility of the proposed approach.Conclusions WebDISCO (Web-based Distributed Cox Regression Model; https://webdisco.ucsd-dbmi.org:8443/cox/) provides a proof-of-concept web service that implements a distributed algorithm to conduct distributed survival analysis without sharing patient level data.

Duke Scholars

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Published In

J Am Med Inform Assoc

DOI

EISSN

1527-974X

Publication Date

November 2015

Volume

22

Issue

6

Start / End Page

1212 / 1219

Location

England

Related Subject Headings

  • Survival Analysis
  • Proportional Hazards Models
  • Medical Informatics
  • Internet
  • Information Dissemination
  • Humans
  • Decision Support Systems, Clinical
  • Datasets as Topic
  • Computer Communication Networks
  • Algorithms
 

Citation

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Lu, C.-L., Wang, S., Ji, Z., Wu, Y., Xiong, L., Jiang, X., & Ohno-Machado, L. (2015). WebDISCO: a web service for distributed cox model learning without patient-level data sharing. J Am Med Inform Assoc, 22(6), 1212–1219. https://doi.org/10.1093/jamia/ocv083
Lu, Chia-Lun, Shuang Wang, Zhanglong Ji, Yuan Wu, Li Xiong, Xiaoqian Jiang, and Lucila Ohno-Machado. “WebDISCO: a web service for distributed cox model learning without patient-level data sharing.J Am Med Inform Assoc 22, no. 6 (November 2015): 1212–19. https://doi.org/10.1093/jamia/ocv083.
Lu C-L, Wang S, Ji Z, Wu Y, Xiong L, Jiang X, et al. WebDISCO: a web service for distributed cox model learning without patient-level data sharing. J Am Med Inform Assoc. 2015 Nov;22(6):1212–9.
Lu, Chia-Lun, et al. “WebDISCO: a web service for distributed cox model learning without patient-level data sharing.J Am Med Inform Assoc, vol. 22, no. 6, Nov. 2015, pp. 1212–19. Pubmed, doi:10.1093/jamia/ocv083.
Lu C-L, Wang S, Ji Z, Wu Y, Xiong L, Jiang X, Ohno-Machado L. WebDISCO: a web service for distributed cox model learning without patient-level data sharing. J Am Med Inform Assoc. 2015 Nov;22(6):1212–1219.
Journal cover image

Published In

J Am Med Inform Assoc

DOI

EISSN

1527-974X

Publication Date

November 2015

Volume

22

Issue

6

Start / End Page

1212 / 1219

Location

England

Related Subject Headings

  • Survival Analysis
  • Proportional Hazards Models
  • Medical Informatics
  • Internet
  • Information Dissemination
  • Humans
  • Decision Support Systems, Clinical
  • Datasets as Topic
  • Computer Communication Networks
  • Algorithms