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Adaptive models for gene networks.

Publication ,  Journal Article
Shin, Y-J; Sayed, AH; Shen, X
Published in: PLoS One
2012

Biological systems are often treated as time-invariant by computational models that use fixed parameter values. In this study, we demonstrate that the behavior of the p53-MDM2 gene network in individual cells can be tracked using adaptive filtering algorithms and the resulting time-variant models can approximate experimental measurements more accurately than time-invariant models. Adaptive models with time-variant parameters can help reduce modeling complexity and can more realistically represent biological systems.

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Published In

PLoS One

DOI

EISSN

1932-6203

Publication Date

2012

Volume

7

Issue

2

Start / End Page

e31657

Location

United States

Related Subject Headings

  • Tumor Suppressor Protein p53
  • Time Factors
  • Systems Biology
  • Proto-Oncogene Proteins c-mdm2
  • Models, Genetic
  • Humans
  • General Science & Technology
  • Gene Regulatory Networks
  • Algorithms
 

Citation

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Shin, Y.-J., Sayed, A. H., & Shen, X. (2012). Adaptive models for gene networks. PLoS One, 7(2), e31657. https://doi.org/10.1371/journal.pone.0031657
Shin, Yong-Jun, Ali H. Sayed, and Xiling Shen. “Adaptive models for gene networks.PLoS One 7, no. 2 (2012): e31657. https://doi.org/10.1371/journal.pone.0031657.
Shin Y-J, Sayed AH, Shen X. Adaptive models for gene networks. PLoS One. 2012;7(2):e31657.
Shin, Yong-Jun, et al. “Adaptive models for gene networks.PLoS One, vol. 7, no. 2, 2012, p. e31657. Pubmed, doi:10.1371/journal.pone.0031657.
Shin Y-J, Sayed AH, Shen X. Adaptive models for gene networks. PLoS One. 2012;7(2):e31657.

Published In

PLoS One

DOI

EISSN

1932-6203

Publication Date

2012

Volume

7

Issue

2

Start / End Page

e31657

Location

United States

Related Subject Headings

  • Tumor Suppressor Protein p53
  • Time Factors
  • Systems Biology
  • Proto-Oncogene Proteins c-mdm2
  • Models, Genetic
  • Humans
  • General Science & Technology
  • Gene Regulatory Networks
  • Algorithms