Skip to main content

Measuring similarity between dynamic ensembles of biomolecules.

Publication ,  Journal Article
Yang, S; Salmon, L; Al-Hashimi, HM
Published in: Nat Methods
May 2014

We present a simple and general approach termed REsemble for quantifying population overlap and structural similarity between ensembles. This approach captures improvements in the quality of ensembles determined using increasing input experimental data--improvements that go undetected when conventional methods for comparing ensembles are used--and reveals unexpected similarities between RNA ensembles determined using NMR and molecular dynamics simulations.

Duke Scholars

Altmetric Attention Stats
Dimensions Citation Stats

Published In

Nat Methods

DOI

EISSN

1548-7105

Publication Date

May 2014

Volume

11

Issue

5

Start / End Page

552 / 554

Location

United States

Related Subject Headings

  • Temperature
  • Software
  • RNA, Viral
  • Protein Conformation
  • Programming Languages
  • Probability
  • Nucleic Acid Conformation
  • Molecular Dynamics Simulation
  • Models, Theoretical
  • Magnetic Resonance Spectroscopy
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Yang, S., Salmon, L., & Al-Hashimi, H. M. (2014). Measuring similarity between dynamic ensembles of biomolecules. Nat Methods, 11(5), 552–554. https://doi.org/10.1038/nmeth.2921
Yang, Shan, Loïc Salmon, and Hashim M. Al-Hashimi. “Measuring similarity between dynamic ensembles of biomolecules.Nat Methods 11, no. 5 (May 2014): 552–54. https://doi.org/10.1038/nmeth.2921.
Yang S, Salmon L, Al-Hashimi HM. Measuring similarity between dynamic ensembles of biomolecules. Nat Methods. 2014 May;11(5):552–4.
Yang, Shan, et al. “Measuring similarity between dynamic ensembles of biomolecules.Nat Methods, vol. 11, no. 5, May 2014, pp. 552–54. Pubmed, doi:10.1038/nmeth.2921.
Yang S, Salmon L, Al-Hashimi HM. Measuring similarity between dynamic ensembles of biomolecules. Nat Methods. 2014 May;11(5):552–554.

Published In

Nat Methods

DOI

EISSN

1548-7105

Publication Date

May 2014

Volume

11

Issue

5

Start / End Page

552 / 554

Location

United States

Related Subject Headings

  • Temperature
  • Software
  • RNA, Viral
  • Protein Conformation
  • Programming Languages
  • Probability
  • Nucleic Acid Conformation
  • Molecular Dynamics Simulation
  • Models, Theoretical
  • Magnetic Resonance Spectroscopy