Disruptive mRNA folding increases translational efficiency of catechol-O-methyltransferase variant.

Journal Article (Journal Article)

Catechol-O-methyltransferase (COMT) is a major enzyme controlling catecholamine levels that plays a central role in cognition, affective mood and pain perception. There are three common COMT haplotypes in the human population reported to have functional effects, divergent in two synonymous and one nonsynonymous position. We demonstrate that one of the haplotypes, carrying the non-synonymous variation known to code for a less stable protein, exhibits increased protein expression in vitro. This increased protein expression, which would compensate for lower protein stability, is solely produced by a synonymous variation (C(166)T) situated within the haplotype and located in the 5' region of the RNA transcript. Based on mRNA secondary structure predictions, we suggest that structural destabilization near the start codon caused by the T allele could be related to the observed increase in COMT expression. Our folding simulations of the tertiary mRNA structures demonstrate that destabilization by the T allele lowers the folding transition barrier, thus decreasing the probability of occupying its native state. These data suggest a novel structural mechanism whereby functional synonymous variations near the translation initiation codon affect the translation efficiency via entropy-driven changes in mRNA dynamics and present another example of stable compensatory genetic variations in the human population.

Full Text

Duke Authors

Cited Authors

  • Tsao, D; Shabalina, SA; Gauthier, J; Dokholyan, NV; Diatchenko, L

Published Date

  • August 2011

Published In

Volume / Issue

  • 39 / 14

Start / End Page

  • 6201 - 6212

PubMed ID

  • 21486747

Pubmed Central ID

  • PMC3152328

Electronic International Standard Serial Number (EISSN)

  • 1362-4962

Digital Object Identifier (DOI)

  • 10.1093/nar/gkr165


  • eng

Conference Location

  • England