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Effect of a Low-Rank Denoising Algorithm on Quantitative Magnetic Resonance Imaging-Based Measures of Liver Fat and Iron.

Publication ,  Journal Article
Allen, BC; Lugauer, F; Nickel, D; Bhatti, L; Dafalla, RA; Dale, BM; Jaffe, TA; Bashir, MR
Published in: J Comput Assist Tomogr
2017

PURPOSE: This study aimed to assess the effect of a low-rank denoising algorithm on quantitative magnetic resonance imaging-based measures of liver fat and iron. MATERIALS AND METHODS: This was an institutional review board-approved, Health Insurance Portability and Accountability Act-compliant, retrospective analysis of 42 consecutive subjects who were imaged at 3T using a multiecho gradient echo sequence that was reconstructed using the multistep adaptive fitting algorithm to obtain quantitative proton density fat fraction (PDFF) and R2* maps (original maps). A patch-wise low-rank denoising algorithm was then applied, and PDFF and R2* maps were created (denoised maps). Three readers independently rated the PDFF maps in terms of vessel and liver edge sharpness and image noise using a 5-point scale. Two other readers independently measured mean and standard deviation of PDFF and R2* values for the original and denoised maps; values were compared using intraclass correlation coefficients (ICCs) and mean difference analyses. RESULTS: Qualitatively, the denoised maps were preferred by all 3 readers based on image noise (P < 0.001) and by 2 of 3 readers based on vessel edge sharpness (P < 0.001-0.99). No reader had a significant preference regarding liver edge sharpness (P = 0.16-0.48). Quantitatively, agreement was near perfect between the original and denoised maps for PDFF (ICC = 0.995) and R2* (ICC = 0.995) values. Mean quantitative values obtained from the original and denoised maps were similar for liver PDFF (7.6 ± 7.7% vs 7.7 ± 7.8%; P = 0.63) and R2* (52.9 ± 40.3s vs 52.8 ± 41.1 s, P = 0.74). CONCLUSIONS: Applying the low-rank denoising algorithm to liver fat and iron quantification reduces image noise in PDFF and R2* maps without adversely affecting mean quantitative values or subjective image quality.

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Published In

J Comput Assist Tomogr

DOI

EISSN

1532-3145

Publication Date

2017

Volume

41

Issue

3

Start / End Page

412 / 416

Location

United States

Related Subject Headings

  • Young Adult
  • Retrospective Studies
  • Reproducibility of Results
  • Nuclear Medicine & Medical Imaging
  • Middle Aged
  • Male
  • Magnetic Resonance Imaging
  • Liver
  • Iron
  • Image Processing, Computer-Assisted
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Allen, B. C., Lugauer, F., Nickel, D., Bhatti, L., Dafalla, R. A., Dale, B. M., … Bashir, M. R. (2017). Effect of a Low-Rank Denoising Algorithm on Quantitative Magnetic Resonance Imaging-Based Measures of Liver Fat and Iron. J Comput Assist Tomogr, 41(3), 412–416. https://doi.org/10.1097/RCT.0000000000000535
Allen, Brian C., Felix Lugauer, Dominik Nickel, Lubna Bhatti, Randa A. Dafalla, Brian M. Dale, Tracy A. Jaffe, and Mustafa R. Bashir. “Effect of a Low-Rank Denoising Algorithm on Quantitative Magnetic Resonance Imaging-Based Measures of Liver Fat and Iron.J Comput Assist Tomogr 41, no. 3 (2017): 412–16. https://doi.org/10.1097/RCT.0000000000000535.
Allen BC, Lugauer F, Nickel D, Bhatti L, Dafalla RA, Dale BM, et al. Effect of a Low-Rank Denoising Algorithm on Quantitative Magnetic Resonance Imaging-Based Measures of Liver Fat and Iron. J Comput Assist Tomogr. 2017;41(3):412–6.
Allen, Brian C., et al. “Effect of a Low-Rank Denoising Algorithm on Quantitative Magnetic Resonance Imaging-Based Measures of Liver Fat and Iron.J Comput Assist Tomogr, vol. 41, no. 3, 2017, pp. 412–16. Pubmed, doi:10.1097/RCT.0000000000000535.
Allen BC, Lugauer F, Nickel D, Bhatti L, Dafalla RA, Dale BM, Jaffe TA, Bashir MR. Effect of a Low-Rank Denoising Algorithm on Quantitative Magnetic Resonance Imaging-Based Measures of Liver Fat and Iron. J Comput Assist Tomogr. 2017;41(3):412–416.

Published In

J Comput Assist Tomogr

DOI

EISSN

1532-3145

Publication Date

2017

Volume

41

Issue

3

Start / End Page

412 / 416

Location

United States

Related Subject Headings

  • Young Adult
  • Retrospective Studies
  • Reproducibility of Results
  • Nuclear Medicine & Medical Imaging
  • Middle Aged
  • Male
  • Magnetic Resonance Imaging
  • Liver
  • Iron
  • Image Processing, Computer-Assisted