dictyBase--a Dictyostelium bioinformatics resource update.

Published

Journal Article

dictyBase (http://dictybase.org) is the model organism database for Dictyostelium discoideum. It houses the complete genome sequence, ESTs and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome. This dictyBase update describes the annotations and features implemented since 2006, including improved strain and phenotype representation, integration of predicted transcriptional regulatory elements, protein domain information, biochemical pathways, improved searching and a wiki tool that allows members of the research community to provide annotations.

Full Text

Duke Authors

Cited Authors

  • Fey, P; Gaudet, P; Curk, T; Zupan, B; Just, EM; Basu, S; Merchant, SN; Bushmanova, YA; Shaulsky, G; Kibbe, WA; Chisholm, RL

Published Date

  • January 2009

Published In

Volume / Issue

  • 37 / Database issue

Start / End Page

  • D515 - D519

PubMed ID

  • 18974179

Pubmed Central ID

  • 18974179

Electronic International Standard Serial Number (EISSN)

  • 1362-4962

International Standard Serial Number (ISSN)

  • 0305-1048

Digital Object Identifier (DOI)

  • 10.1093/nar/gkn844

Language

  • eng