dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa.

Published

Journal Article

dictyBase (http://www.dictybase.org), the model organism database for Dictyostelium, aims to provide the broad biomedical research community with well integrated, high quality data and tools for Dictyostelium discoideum and related species. dictyBase houses the complete genome sequence, ESTs, and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome to provide a 'reference genome' in the Amoebozoa clade. We highlight several new features in the present update: (i) new annotations; (ii) improved interface with web 2.0 functionality; (iii) the initial steps towards a genome portal for the Amoebozoa; (iv) ortholog display; and (v) the complete integration of the Dicty Stock Center with dictyBase.

Full Text

Duke Authors

Cited Authors

  • Gaudet, P; Fey, P; Basu, S; Bushmanova, YA; Dodson, R; Sheppard, KA; Just, EM; Kibbe, WA; Chisholm, RL

Published Date

  • January 2011

Published In

Volume / Issue

  • 39 / Database issue

Start / End Page

  • D620 - D624

PubMed ID

  • 21087999

Pubmed Central ID

  • 21087999

Electronic International Standard Serial Number (EISSN)

  • 1362-4962

International Standard Serial Number (ISSN)

  • 0305-1048

Digital Object Identifier (DOI)

  • 10.1093/nar/gkq1103

Language

  • eng