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Principles that govern competition or co-existence in Rho-GTPase driven polarization.

Publication ,  Journal Article
Chiou, J-G; Ramirez, SA; Elston, TC; Witelski, TP; Schaeffer, DG; Lew, DJ
Published in: PLoS Comput Biol
April 2018

Rho-GTPases are master regulators of polarity establishment and cell morphology. Positive feedback enables concentration of Rho-GTPases into clusters at the cell cortex, from where they regulate the cytoskeleton. Different cell types reproducibly generate either one (e.g. the front of a migrating cell) or several clusters (e.g. the multiple dendrites of a neuron), but the mechanistic basis for unipolar or multipolar outcomes is unclear. The design principles of Rho-GTPase circuits are captured by two-component reaction-diffusion models based on conserved aspects of Rho-GTPase biochemistry. Some such models display rapid winner-takes-all competition between clusters, yielding a unipolar outcome. Other models allow prolonged co-existence of clusters. We investigate the behavior of a simple class of models and show that while the timescale of competition varies enormously depending on model parameters, a single factor explains a large majority of this variation. The dominant factor concerns the degree to which the maximal active GTPase concentration in a cluster approaches a "saturation point" determined by model parameters. We suggest that both saturation and the effect of saturation on competition reflect fundamental properties of the Rho-GTPase polarity machinery, regardless of the specific feedback mechanism, which predict whether the system will generate unipolar or multipolar outcomes.

Duke Scholars

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Published In

PLoS Comput Biol

DOI

EISSN

1553-7358

Publication Date

April 2018

Volume

14

Issue

4

Start / End Page

e1006095

Location

United States

Related Subject Headings

  • rho GTP-Binding Proteins
  • Saccharomyces cerevisiae Proteins
  • Protein Aggregates
  • Models, Biological
  • Kinetics
  • Cytoskeleton
  • Cytoplasm
  • Computer Simulation
  • Computational Biology
  • Cell Polarity
 

Citation

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Chiou, J.-G., Ramirez, S. A., Elston, T. C., Witelski, T. P., Schaeffer, D. G., & Lew, D. J. (2018). Principles that govern competition or co-existence in Rho-GTPase driven polarization. PLoS Comput Biol, 14(4), e1006095. https://doi.org/10.1371/journal.pcbi.1006095
Chiou, Jian-Geng, Samuel A. Ramirez, Timothy C. Elston, Thomas P. Witelski, David G. Schaeffer, and Daniel J. Lew. “Principles that govern competition or co-existence in Rho-GTPase driven polarization.PLoS Comput Biol 14, no. 4 (April 2018): e1006095. https://doi.org/10.1371/journal.pcbi.1006095.
Chiou J-G, Ramirez SA, Elston TC, Witelski TP, Schaeffer DG, Lew DJ. Principles that govern competition or co-existence in Rho-GTPase driven polarization. PLoS Comput Biol. 2018 Apr;14(4):e1006095.
Chiou, Jian-Geng, et al. “Principles that govern competition or co-existence in Rho-GTPase driven polarization.PLoS Comput Biol, vol. 14, no. 4, Apr. 2018, p. e1006095. Pubmed, doi:10.1371/journal.pcbi.1006095.
Chiou J-G, Ramirez SA, Elston TC, Witelski TP, Schaeffer DG, Lew DJ. Principles that govern competition or co-existence in Rho-GTPase driven polarization. PLoS Comput Biol. 2018 Apr;14(4):e1006095.

Published In

PLoS Comput Biol

DOI

EISSN

1553-7358

Publication Date

April 2018

Volume

14

Issue

4

Start / End Page

e1006095

Location

United States

Related Subject Headings

  • rho GTP-Binding Proteins
  • Saccharomyces cerevisiae Proteins
  • Protein Aggregates
  • Models, Biological
  • Kinetics
  • Cytoskeleton
  • Cytoplasm
  • Computer Simulation
  • Computational Biology
  • Cell Polarity