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Discovery of Lipidome Alterations Following Traumatic Brain Injury via High-Resolution Metabolomics.

Publication ,  Journal Article
Hogan, SR; Phan, JH; Alvarado-Velez, M; Wang, MD; Bellamkonda, RV; Fernández, FM; LaPlaca, MC
Published in: Journal of proteome research
June 2018

Traumatic brain injury (TBI) can occur across wide segments of the population, presenting in a heterogeneous manner that makes diagnosis inconsistent and management challenging. Biomarkers offer the potential to objectively identify injury status, severity, and phenotype by measuring the relative concentrations of endogenous molecules in readily accessible biofluids. Through a data-driven, discovery approach, novel biomarker candidates for TBI were identified in the serum lipidome of adult male Sprague-Dawley rats in the first week following moderate controlled cortical impact (CCI). Serum samples were analyzed in positive and negative modes by ultraperformance liquid chromatography-mass spectrometry (UPLC-MS). A predictive panel for the classification of injured and uninjured sera samples, consisting of 26 dysregulated species belonging to a variety of lipid classes, was developed with a cross-validated accuracy of 85.3% using omniClassifier software to optimize feature selection. Polyunsaturated fatty acids (PUFAs) and PUFA-containing diacylglycerols were found to be upregulated in sera from injured rats, while changes in sphingolipids and other membrane phospholipids were also observed, many of which map to known secondary injury pathways. Overall, the identified biomarker panel offers viable molecular candidates representing lipids that may readily cross the blood-brain barrier (BBB) and aid in the understanding of TBI pathophysiology.

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Published In

Journal of proteome research

DOI

EISSN

1535-3907

ISSN

1535-3893

Publication Date

June 2018

Volume

17

Issue

6

Start / End Page

2131 / 2143

Related Subject Headings

  • Tandem Mass Spectrometry
  • Software
  • Rats, Sprague-Dawley
  • Rats
  • Metabolomics
  • Male
  • Lipid Metabolism
  • Chromatography, Liquid
  • Brain Injuries, Traumatic
  • Biomarkers
 

Citation

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Hogan, S. R., Phan, J. H., Alvarado-Velez, M., Wang, M. D., Bellamkonda, R. V., Fernández, F. M., & LaPlaca, M. C. (2018). Discovery of Lipidome Alterations Following Traumatic Brain Injury via High-Resolution Metabolomics. Journal of Proteome Research, 17(6), 2131–2143. https://doi.org/10.1021/acs.jproteome.8b00068
Hogan, Scott R., John H. Phan, Melissa Alvarado-Velez, May Dongmei Wang, Ravi V. Bellamkonda, Facundo M. Fernández, and Michelle C. LaPlaca. “Discovery of Lipidome Alterations Following Traumatic Brain Injury via High-Resolution Metabolomics.Journal of Proteome Research 17, no. 6 (June 2018): 2131–43. https://doi.org/10.1021/acs.jproteome.8b00068.
Hogan SR, Phan JH, Alvarado-Velez M, Wang MD, Bellamkonda RV, Fernández FM, et al. Discovery of Lipidome Alterations Following Traumatic Brain Injury via High-Resolution Metabolomics. Journal of proteome research. 2018 Jun;17(6):2131–43.
Hogan, Scott R., et al. “Discovery of Lipidome Alterations Following Traumatic Brain Injury via High-Resolution Metabolomics.Journal of Proteome Research, vol. 17, no. 6, June 2018, pp. 2131–43. Epmc, doi:10.1021/acs.jproteome.8b00068.
Hogan SR, Phan JH, Alvarado-Velez M, Wang MD, Bellamkonda RV, Fernández FM, LaPlaca MC. Discovery of Lipidome Alterations Following Traumatic Brain Injury via High-Resolution Metabolomics. Journal of proteome research. 2018 Jun;17(6):2131–2143.
Journal cover image

Published In

Journal of proteome research

DOI

EISSN

1535-3907

ISSN

1535-3893

Publication Date

June 2018

Volume

17

Issue

6

Start / End Page

2131 / 2143

Related Subject Headings

  • Tandem Mass Spectrometry
  • Software
  • Rats, Sprague-Dawley
  • Rats
  • Metabolomics
  • Male
  • Lipid Metabolism
  • Chromatography, Liquid
  • Brain Injuries, Traumatic
  • Biomarkers