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High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea.

Publication ,  Journal Article
Xie, N; Sen, B; Song, Z; Zhao, Y; Chen, Z; Shi, W; Zhang, Y; Zhang, J; Johnson, ZI; Wang, G
Published in: Environmental microbiology
August 2018

The unicellular Labyrinthulomycete protists have long been considered to play a significant role in ocean carbon cycling. However, their distribution and biogeochemical function remain poorly understood. We present a large-scale study of their spatiotemporal abundance and diversity in the coastal waters of Bohai Sea using flow cytometry and high-throughput sequencing. These protists display niche preferences and episodic higher biomass than that of bacterioplankton with much phylogenetic diversity (> 4000 OTUs) ever reported. They were ubiquitous with a typical abundance range of 100-1000 cells ml-1 and biomass range of 0.06-574.59 μg C L-1 . The observed spatiotemporal abundance variations support the current 'left-over scavengers' nutritional model and highlight these protists as a significant component of the marine microbial loop. The higher average abundance and phylogenetic diversity in the nearshore compared with those in the offshore reveal their predominant role in the terrigenous matter decomposition. Furthermore, the differential relationship of the protist genera to environmental conditions together with their co-occurrence network suggests their unique substrate preferences and niche partitioning. With few subnetworks and possible keystone species, their network topology indicates community resilience and high connectance level of few operational taxonomic units (OTUs). We demonstrate the significant contribution of these protists to the secondary production and nutrient cycling in the coastal waters. As secondary producers, their role will become more important with increasingly coastal eutrophication.

Duke Scholars

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Published In

Environmental microbiology

DOI

EISSN

1462-2920

ISSN

1462-2912

Publication Date

August 2018

Volume

20

Issue

8

Start / End Page

3042 / 3056

Related Subject Headings

  • Seawater
  • Phylogeny
  • Oceans and Seas
  • Microbiology
  • Eukaryota
  • Biomass
  • Biodiversity
  • 3107 Microbiology
  • 3103 Ecology
  • 0605 Microbiology
 

Citation

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Xie, N., Sen, B., Song, Z., Zhao, Y., Chen, Z., Shi, W., … Wang, G. (2018). High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea. Environmental Microbiology, 20(8), 3042–3056. https://doi.org/10.1111/1462-2920.14341
Xie, Ningdong, Biswarup Sen, Zhiquan Song, Yue Zhao, Zixi Chen, Weijie Shi, Yongfeng Zhang, Jianle Zhang, Zackary I. Johnson, and Guangyi Wang. “High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea.Environmental Microbiology 20, no. 8 (August 2018): 3042–56. https://doi.org/10.1111/1462-2920.14341.
Xie N, Sen B, Song Z, Zhao Y, Chen Z, Shi W, et al. High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea. Environmental microbiology. 2018 Aug;20(8):3042–56.
Xie, Ningdong, et al. “High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea.Environmental Microbiology, vol. 20, no. 8, Aug. 2018, pp. 3042–56. Epmc, doi:10.1111/1462-2920.14341.
Xie N, Sen B, Song Z, Zhao Y, Chen Z, Shi W, Zhang Y, Zhang J, Johnson ZI, Wang G. High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea. Environmental microbiology. 2018 Aug;20(8):3042–3056.
Journal cover image

Published In

Environmental microbiology

DOI

EISSN

1462-2920

ISSN

1462-2912

Publication Date

August 2018

Volume

20

Issue

8

Start / End Page

3042 / 3056

Related Subject Headings

  • Seawater
  • Phylogeny
  • Oceans and Seas
  • Microbiology
  • Eukaryota
  • Biomass
  • Biodiversity
  • 3107 Microbiology
  • 3103 Ecology
  • 0605 Microbiology