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Practical considerations in genomic decision support: The eMERGE experience.

Publication ,  Journal Article
Herr, TM; Bielinski, SJ; Bottinger, E; Brautbar, A; Brilliant, M; Chute, CG; Cobb, BL; Denny, JC; Hakonarson, H; Hartzler, AL; Hripcsak, G ...
Published in: J Pathol Inform
2015

BACKGROUND: Genomic medicine has the potential to improve care by tailoring treatments to the individual. There is consensus in the literature that pharmacogenomics (PGx) may be an ideal starting point for real-world implementation, due to the presence of well-characterized drug-gene interactions. Clinical Decision Support (CDS) is an ideal avenue by which to implement PGx at the bedside. Previous literature has established theoretical models for PGx CDS implementation and discussed a number of anticipated real-world challenges. However, work detailing actual PGx CDS implementation experiences has been limited. Anticipated challenges include data storage and management, system integration, physician acceptance, and more. METHODS: In this study, we analyzed the experiences of ten members of the Electronic Medical Records and Genomics (eMERGE) Network, and one affiliate, in their attempts to implement PGx CDS. We examined the resulting PGx CDS system characteristics and conducted a survey to understand the unanticipated implementation challenges sites encountered. RESULTS: Ten sites have successfully implemented at least one PGx CDS rule in the clinical setting. The majority of sites elected to create an Omic Ancillary System (OAS) to manage genetic and genomic data. All sites were able to adapt their existing CDS tools for PGx knowledge. The most common and impactful delays were not PGx-specific issues. Instead, they were general IT implementation problems, with top challenges including team coordination/communication and staffing. The challenges encountered caused a median total delay in system go-live of approximately two months. CONCLUSIONS: These results suggest that barriers to PGx CDS implementations are generally surmountable. Moreover, PGx CDS implementation may not be any more difficult than other healthcare IT projects of similar scope, as the most significant delays encountered were not unique to genomic medicine. These are encouraging results for any institution considering implementing a PGx CDS tool, and for the advancement of genomic medicine.

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Published In

J Pathol Inform

DOI

ISSN

2229-5089

Publication Date

2015

Volume

6

Start / End Page

50

Location

United States

Related Subject Headings

  • 4609 Information systems
  • 3102 Bioinformatics and computational biology
  • 0601 Biochemistry and Cell Biology
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Herr, T. M., Bielinski, S. J., Bottinger, E., Brautbar, A., Brilliant, M., Chute, C. G., … Starren, J. (2015). Practical considerations in genomic decision support: The eMERGE experience. J Pathol Inform, 6, 50. https://doi.org/10.4103/2153-3539.165999
Herr, Timothy M., Suzette J. Bielinski, Erwin Bottinger, Ariel Brautbar, Murray Brilliant, Christopher G. Chute, Beth L. Cobb, et al. “Practical considerations in genomic decision support: The eMERGE experience.J Pathol Inform 6 (2015): 50. https://doi.org/10.4103/2153-3539.165999.
Herr TM, Bielinski SJ, Bottinger E, Brautbar A, Brilliant M, Chute CG, et al. Practical considerations in genomic decision support: The eMERGE experience. J Pathol Inform. 2015;6:50.
Herr, Timothy M., et al. “Practical considerations in genomic decision support: The eMERGE experience.J Pathol Inform, vol. 6, 2015, p. 50. Pubmed, doi:10.4103/2153-3539.165999.
Herr TM, Bielinski SJ, Bottinger E, Brautbar A, Brilliant M, Chute CG, Cobb BL, Denny JC, Hakonarson H, Hartzler AL, Hripcsak G, Kannry J, Kohane IS, Kullo IJ, Lin S, Manzi S, Marsolo K, Overby CL, Pathak J, Peissig P, Pulley J, Ralston J, Rasmussen L, Roden DM, Tromp G, Uphoff T, Weng C, Wolf W, Williams MS, Starren J. Practical considerations in genomic decision support: The eMERGE experience. J Pathol Inform. 2015;6:50.

Published In

J Pathol Inform

DOI

ISSN

2229-5089

Publication Date

2015

Volume

6

Start / End Page

50

Location

United States

Related Subject Headings

  • 4609 Information systems
  • 3102 Bioinformatics and computational biology
  • 0601 Biochemistry and Cell Biology