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Intrinsic disorder drives N-terminal ubiquitination by Ube2w.

Publication ,  Journal Article
Vittal, V; Shi, L; Wenzel, DM; Scaglione, KM; Duncan, ED; Basrur, V; Elenitoba-Johnson, KSJ; Baker, D; Paulson, HL; Brzovic, PS; Klevit, RE
Published in: Nat Chem Biol
January 2015

Ubiquitination of the αN-terminus of protein substrates has been reported sporadically since the early 1980s. However, the identity of an enzyme responsible for this unique ubiquitin (Ub) modification has only recently been elucidated. We show the Ub-conjugating enzyme (E2) Ube2w uses a unique mechanism to facilitate the specific ubiquitination of the α-amino group of its substrates that involves recognition of backbone atoms of intrinsically disordered N termini. We present the NMR-based solution ensemble of full-length Ube2w that reveals a structural architecture unlike that of any other E2 in which its C terminus is partly disordered and flexible to accommodate variable substrate N termini. Flexibility of the substrate is critical for recognition by Ube2w, and either point mutations in or the removal of the flexible C terminus of Ube2w inhibits substrate binding and modification. Mechanistic insights reported here provide guiding principles for future efforts to define the N-terminal ubiquitome in cells.

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Published In

Nat Chem Biol

DOI

EISSN

1552-4469

Publication Date

January 2015

Volume

11

Issue

1

Start / End Page

83 / 89

Location

United States

Related Subject Headings

  • Ubiquitination
  • Ubiquitin-Conjugating Enzymes
  • Ubiquinone
  • Substrate Specificity
  • Protein Conformation
  • Protein Binding
  • Point Mutation
  • Models, Molecular
  • Magnetic Resonance Spectroscopy
  • Humans
 

Citation

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Vittal, V., Shi, L., Wenzel, D. M., Scaglione, K. M., Duncan, E. D., Basrur, V., … Klevit, R. E. (2015). Intrinsic disorder drives N-terminal ubiquitination by Ube2w. Nat Chem Biol, 11(1), 83–89. https://doi.org/10.1038/nchembio.1700
Vittal, Vinayak, Lei Shi, Dawn M. Wenzel, K Matthew Scaglione, Emily D. Duncan, Venkatesha Basrur, Kojo S. J. Elenitoba-Johnson, et al. “Intrinsic disorder drives N-terminal ubiquitination by Ube2w.Nat Chem Biol 11, no. 1 (January 2015): 83–89. https://doi.org/10.1038/nchembio.1700.
Vittal V, Shi L, Wenzel DM, Scaglione KM, Duncan ED, Basrur V, et al. Intrinsic disorder drives N-terminal ubiquitination by Ube2w. Nat Chem Biol. 2015 Jan;11(1):83–9.
Vittal, Vinayak, et al. “Intrinsic disorder drives N-terminal ubiquitination by Ube2w.Nat Chem Biol, vol. 11, no. 1, Jan. 2015, pp. 83–89. Pubmed, doi:10.1038/nchembio.1700.
Vittal V, Shi L, Wenzel DM, Scaglione KM, Duncan ED, Basrur V, Elenitoba-Johnson KSJ, Baker D, Paulson HL, Brzovic PS, Klevit RE. Intrinsic disorder drives N-terminal ubiquitination by Ube2w. Nat Chem Biol. 2015 Jan;11(1):83–89.

Published In

Nat Chem Biol

DOI

EISSN

1552-4469

Publication Date

January 2015

Volume

11

Issue

1

Start / End Page

83 / 89

Location

United States

Related Subject Headings

  • Ubiquitination
  • Ubiquitin-Conjugating Enzymes
  • Ubiquinone
  • Substrate Specificity
  • Protein Conformation
  • Protein Binding
  • Point Mutation
  • Models, Molecular
  • Magnetic Resonance Spectroscopy
  • Humans