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Survival cluster analysis

Publication ,  Journal Article
Chapfuwa, P; Li, C; Mehta, N; Carin, L; Henao, R
Published in: ACM CHIL 2020 - Proceedings of the 2020 ACM Conference on Health, Inference, and Learning
February 4, 2020

Conventional survival analysis approaches estimate risk scores or individualized time-to-event distributions conditioned on covariates. In practice, there is often great population-level phenotypic heterogeneity, resulting from (unknown) subpopulations with diverse risk profiles or survival distributions. As a result, there is an unmet need in survival analysis for identifying subpopulations with distinct risk profiles, while jointly accounting for accurate individualized time-to-event predictions. An approach that addresses this need is likely to improve the characterization of individual outcomes by leveraging regularities in subpopulations, thus accounting for population-level heterogeneity. In this paper, we propose a Bayesian nonparametrics approach that represents observations (subjects) in a clustered latent space, and encourages accurate time-to-event predictions and clusters (subpopulations) with distinct risk profiles. Experiments on real-world datasets show consistent improvements in predictive performance and interpretability relative to existing state-of-the-art survival analysis models.

Duke Scholars

Published In

ACM CHIL 2020 - Proceedings of the 2020 ACM Conference on Health, Inference, and Learning

DOI

Publication Date

February 4, 2020

Start / End Page

60 / 68
 

Citation

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Chapfuwa, P., Li, C., Mehta, N., Carin, L., & Henao, R. (2020). Survival cluster analysis. ACM CHIL 2020 - Proceedings of the 2020 ACM Conference on Health, Inference, and Learning, 60–68. https://doi.org/10.1145/3368555.3384465
Chapfuwa, P., C. Li, N. Mehta, L. Carin, and R. Henao. “Survival cluster analysis.” ACM CHIL 2020 - Proceedings of the 2020 ACM Conference on Health, Inference, and Learning, February 4, 2020, 60–68. https://doi.org/10.1145/3368555.3384465.
Chapfuwa P, Li C, Mehta N, Carin L, Henao R. Survival cluster analysis. ACM CHIL 2020 - Proceedings of the 2020 ACM Conference on Health, Inference, and Learning. 2020 Feb 4;60–8.
Chapfuwa, P., et al. “Survival cluster analysis.” ACM CHIL 2020 - Proceedings of the 2020 ACM Conference on Health, Inference, and Learning, Feb. 2020, pp. 60–68. Scopus, doi:10.1145/3368555.3384465.
Chapfuwa P, Li C, Mehta N, Carin L, Henao R. Survival cluster analysis. ACM CHIL 2020 - Proceedings of the 2020 ACM Conference on Health, Inference, and Learning. 2020 Feb 4;60–68.

Published In

ACM CHIL 2020 - Proceedings of the 2020 ACM Conference on Health, Inference, and Learning

DOI

Publication Date

February 4, 2020

Start / End Page

60 / 68