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The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution.

Publication ,  Journal Article
Rozenblatt-Rosen, O; Regev, A; Oberdoerffer, P; Nawy, T; Hupalowska, A; Rood, JE; Ashenberg, O; Cerami, E; Coffey, RJ; Demir, E; Ding, L ...
Published in: Cell
April 16, 2020

Crucial transitions in cancer-including tumor initiation, local expansion, metastasis, and therapeutic resistance-involve complex interactions between cells within the dynamic tumor ecosystem. Transformative single-cell genomics technologies and spatial multiplex in situ methods now provide an opportunity to interrogate this complexity at unprecedented resolution. The Human Tumor Atlas Network (HTAN), part of the National Cancer Institute (NCI) Cancer Moonshot Initiative, will establish a clinical, experimental, computational, and organizational framework to generate informative and accessible three-dimensional atlases of cancer transitions for a diverse set of tumor types. This effort complements both ongoing efforts to map healthy organs and previous large-scale cancer genomics approaches focused on bulk sequencing at a single point in time. Generating single-cell, multiparametric, longitudinal atlases and integrating them with clinical outcomes should help identify novel predictive biomarkers and features as well as therapeutically relevant cell types, cell states, and cellular interactions across transitions. The resulting tumor atlases should have a profound impact on our understanding of cancer biology and have the potential to improve cancer detection, prevention, and therapeutic discovery for better precision-medicine treatments of cancer patients and those at risk for cancer.

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Published In

Cell

DOI

EISSN

1097-4172

Publication Date

April 16, 2020

Volume

181

Issue

2

Start / End Page

236 / 249

Location

United States

Related Subject Headings

  • Tumor Microenvironment
  • Single-Cell Analysis
  • Precision Medicine
  • Neoplasms
  • Humans
  • Genomics
  • Developmental Biology
  • Cell Transformation, Neoplastic
  • Atlases as Topic
  • 32 Biomedical and clinical sciences
 

Citation

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Rozenblatt-Rosen, O., Regev, A., Oberdoerffer, P., Nawy, T., Hupalowska, A., Rood, J. E., … Human Tumor Atlas Network, . (2020). The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution. Cell, 181(2), 236–249. https://doi.org/10.1016/j.cell.2020.03.053
Rozenblatt-Rosen, Orit, Aviv Regev, Philipp Oberdoerffer, Tal Nawy, Anna Hupalowska, Jennifer E. Rood, Orr Ashenberg, et al. “The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution.Cell 181, no. 2 (April 16, 2020): 236–49. https://doi.org/10.1016/j.cell.2020.03.053.
Rozenblatt-Rosen O, Regev A, Oberdoerffer P, Nawy T, Hupalowska A, Rood JE, et al. The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution. Cell. 2020 Apr 16;181(2):236–49.
Rozenblatt-Rosen, Orit, et al. “The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution.Cell, vol. 181, no. 2, Apr. 2020, pp. 236–49. Pubmed, doi:10.1016/j.cell.2020.03.053.
Rozenblatt-Rosen O, Regev A, Oberdoerffer P, Nawy T, Hupalowska A, Rood JE, Ashenberg O, Cerami E, Coffey RJ, Demir E, Ding L, Esplin ED, Ford JM, Goecks J, Ghosh S, Gray JW, Guinney J, Hanlon SE, Hughes SK, Hwang ES, Iacobuzio-Donahue CA, Jané-Valbuena J, Johnson BE, Lau KS, Lively T, Mazzilli SA, Pe’er D, Santagata S, Shalek AK, Schapiro D, Snyder MP, Sorger PK, Spira AE, Srivastava S, Tan K, West RB, Williams EH, Human Tumor Atlas Network. The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution. Cell. 2020 Apr 16;181(2):236–249.
Journal cover image

Published In

Cell

DOI

EISSN

1097-4172

Publication Date

April 16, 2020

Volume

181

Issue

2

Start / End Page

236 / 249

Location

United States

Related Subject Headings

  • Tumor Microenvironment
  • Single-Cell Analysis
  • Precision Medicine
  • Neoplasms
  • Humans
  • Genomics
  • Developmental Biology
  • Cell Transformation, Neoplastic
  • Atlases as Topic
  • 32 Biomedical and clinical sciences