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Machine learning prediction of neurocognitive impairment among people with HIV using clinical and multimodal magnetic resonance imaging data.

Publication ,  Journal Article
Xu, Y; Lin, Y; Bell, RP; Towe, SL; Pearson, JM; Nadeem, T; Chan, C; Meade, CS
Published in: J Neurovirol
February 2021

Diagnosis of HIV-associated neurocognitive impairment (NCI) continues to be a clinical challenge. The purpose of this study was to develop a prediction model for NCI among people with HIV using clinical- and magnetic resonance imaging (MRI)-derived features. The sample included 101 adults with chronic HIV disease. NCI was determined using a standardized neuropsychological testing battery comprised of seven domains. MRI features included gray matter volume from high-resolution anatomical scans and white matter integrity from diffusion-weighted imaging. Clinical features included demographics, substance use, and routine laboratory tests. Least Absolute Shrinkage and Selection Operator Logistic regression was used to perform variable selection on MRI features. These features were subsequently used to train a support vector machine (SVM) to predict NCI. Three different classification tasks were performed: one used only clinical features; a second used only selected MRI features; a third used both clinical and selected MRI features. Model performance was evaluated by area under the receiver operating characteristic curve (AUC), accuracy, sensitivity, and specificity with a tenfold cross-validation. The SVM classifier that combined selected MRI with clinical features outperformed the model using clinical features or MRI features alone (AUC: 0.83 vs. 0.62 vs. 0.79; accuracy: 0.80 vs. 0.65 vs. 0.72; sensitivity: 0.86 vs. 0.85 vs. 0.86; specificity: 0.71 vs. 0.37 vs. 0.52). Our results provide preliminary evidence that combining clinical and MRI features can increase accuracy in predicting NCI and could be developed as a potential tool for NCI diagnosis in HIV clinical practice.

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Published In

J Neurovirol

DOI

EISSN

1538-2443

Publication Date

February 2021

Volume

27

Issue

1

Start / End Page

1 / 11

Location

United States

Related Subject Headings

  • Virology
  • Support Vector Machine
  • Magnetic Resonance Imaging
  • Image Interpretation, Computer-Assisted
  • Humans
  • AIDS Dementia Complex
  • 3209 Neurosciences
  • 3207 Medical microbiology
  • 3202 Clinical sciences
  • 1109 Neurosciences
 

Citation

APA
Chicago
ICMJE
MLA
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Xu, Y., Lin, Y., Bell, R. P., Towe, S. L., Pearson, J. M., Nadeem, T., … Meade, C. S. (2021). Machine learning prediction of neurocognitive impairment among people with HIV using clinical and multimodal magnetic resonance imaging data. J Neurovirol, 27(1), 1–11. https://doi.org/10.1007/s13365-020-00930-4
Xu, Yunan, Yizi Lin, Ryan P. Bell, Sheri L. Towe, John M. Pearson, Tauseef Nadeem, Cliburn Chan, and Christina S. Meade. “Machine learning prediction of neurocognitive impairment among people with HIV using clinical and multimodal magnetic resonance imaging data.J Neurovirol 27, no. 1 (February 2021): 1–11. https://doi.org/10.1007/s13365-020-00930-4.
Xu Y, Lin Y, Bell RP, Towe SL, Pearson JM, Nadeem T, et al. Machine learning prediction of neurocognitive impairment among people with HIV using clinical and multimodal magnetic resonance imaging data. J Neurovirol. 2021 Feb;27(1):1–11.
Xu, Yunan, et al. “Machine learning prediction of neurocognitive impairment among people with HIV using clinical and multimodal magnetic resonance imaging data.J Neurovirol, vol. 27, no. 1, Feb. 2021, pp. 1–11. Pubmed, doi:10.1007/s13365-020-00930-4.
Xu Y, Lin Y, Bell RP, Towe SL, Pearson JM, Nadeem T, Chan C, Meade CS. Machine learning prediction of neurocognitive impairment among people with HIV using clinical and multimodal magnetic resonance imaging data. J Neurovirol. 2021 Feb;27(1):1–11.
Journal cover image

Published In

J Neurovirol

DOI

EISSN

1538-2443

Publication Date

February 2021

Volume

27

Issue

1

Start / End Page

1 / 11

Location

United States

Related Subject Headings

  • Virology
  • Support Vector Machine
  • Magnetic Resonance Imaging
  • Image Interpretation, Computer-Assisted
  • Humans
  • AIDS Dementia Complex
  • 3209 Neurosciences
  • 3207 Medical microbiology
  • 3202 Clinical sciences
  • 1109 Neurosciences