Skip to main content

Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B.

Publication ,  Journal Article
Yoo, CY; He, J; Sang, Q; Qiu, Y; Long, L; Kim, RJ-A; Chong, EG; Hahm, J; Morffy, N; Zhou, P; Strader, LC; Nagatani, A; Mo, B; Chen, X; Chen, M
Published in: Nat Commun
September 23, 2021

Photoactivated phytochrome B (PHYB) binds to antagonistically acting PHYTOCHROME-INTERACTING transcription FACTORs (PIFs) to regulate hundreds of light responsive genes in Arabidopsis by promoting PIF degradation. However, whether PHYB directly controls the transactivation activity of PIFs remains ambiguous. Here we show that the prototypic PIF, PIF3, possesses a p53-like transcription activation domain (AD) consisting of a hydrophobic activator motif flanked by acidic residues. A PIF3mAD mutant, in which the activator motif is replaced with alanines, fails to activate PIF3 target genes in Arabidopsis, validating the functions of the PIF3 AD in vivo. Intriguingly, the N-terminal photosensory module of PHYB binds immediately adjacent to the PIF3 AD to repress PIF3's transactivation activity, demonstrating a novel PHYB signaling mechanism through direct interference of the transactivation activity of PIF3. Our findings indicate that PHYB, likely also PHYA, controls the stability and activity of PIFs via structurally separable dual signaling mechanisms.

Duke Scholars

Altmetric Attention Stats
Dimensions Citation Stats

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

September 23, 2021

Volume

12

Issue

1

Start / End Page

5614

Location

England

Related Subject Headings

  • Tumor Suppressor Protein p53
  • Transcriptional Activation
  • Sequence Homology, Amino Acid
  • Protein Binding
  • Plants, Genetically Modified
  • Phytochrome B
  • Phytochrome A
  • Models, Genetic
  • Gene Expression Regulation, Plant
  • Binding Sites
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Yoo, C. Y., He, J., Sang, Q., Qiu, Y., Long, L., Kim, R.-A., … Chen, M. (2021). Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B. Nat Commun, 12(1), 5614. https://doi.org/10.1038/s41467-021-25909-5
Yoo, Chan Yul, Jiangman He, Qing Sang, Yongjian Qiu, Lingyun Long, Ruth Jean-Ae Kim, Emily G. Chong, et al. “Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B.Nat Commun 12, no. 1 (September 23, 2021): 5614. https://doi.org/10.1038/s41467-021-25909-5.
Yoo CY, He J, Sang Q, Qiu Y, Long L, Kim RJ-A, et al. Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B. Nat Commun. 2021 Sep 23;12(1):5614.
Yoo, Chan Yul, et al. “Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B.Nat Commun, vol. 12, no. 1, Sept. 2021, p. 5614. Pubmed, doi:10.1038/s41467-021-25909-5.
Yoo CY, He J, Sang Q, Qiu Y, Long L, Kim RJ-A, Chong EG, Hahm J, Morffy N, Zhou P, Strader LC, Nagatani A, Mo B, Chen X, Chen M. Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B. Nat Commun. 2021 Sep 23;12(1):5614.

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

September 23, 2021

Volume

12

Issue

1

Start / End Page

5614

Location

England

Related Subject Headings

  • Tumor Suppressor Protein p53
  • Transcriptional Activation
  • Sequence Homology, Amino Acid
  • Protein Binding
  • Plants, Genetically Modified
  • Phytochrome B
  • Phytochrome A
  • Models, Genetic
  • Gene Expression Regulation, Plant
  • Binding Sites