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Mutations in PBP2 from ceftriaxone-resistant Neisseria gonorrhoeae alter the dynamics of the β3-β4 loop to favor a low-affinity drug-binding state.

Publication ,  Journal Article
Fenton, BA; Tomberg, J; Sciandra, CA; Nicholas, RA; Davies, C; Zhou, P
Published in: J Biol Chem
October 2021

Resistance to the extended-spectrum cephalosporin ceftriaxone in the pathogenic bacteria Neisseria gonorrhoeae is conferred by mutations in penicillin-binding protein 2 (PBP2), the lethal target of the antibiotic, but how these mutations exert their effect at the molecular level is unclear. Using solution NMR, X-ray crystallography, and isothermal titration calorimetry, we report that WT PBP2 exchanges dynamically between a low-affinity state with an extended β3-β4 loop conformation and a high-affinity state with an inward β3-β4 loop conformation. Histidine-514, which is located at the boundary of the β4 strand, plays an important role during the exchange between these two conformational states. We also find that mutations present in PBP2 from H041, a ceftriaxone-resistant strain of N. gonorrhoeae, increase resistance to ceftriaxone by destabilizing the inward β3-β4 loop conformation or stabilizing the extended β3-β4 loop conformation to favor the low-affinity drug-binding state. These observations reveal a unique mechanism for ceftriaxone resistance, whereby mutations in PBP2 lower the proportion of target molecules in the high-affinity drug-binding state and thus reduce inhibition at lower drug concentrations.

Duke Scholars

Published In

J Biol Chem

DOI

EISSN

1083-351X

Publication Date

October 2021

Volume

297

Issue

4

Start / End Page

101188

Location

United States

Related Subject Headings

  • Serine-Type D-Ala-D-Ala Carboxypeptidase
  • Protein Structure, Secondary
  • Neisseria gonorrhoeae
  • Mutation, Missense
  • Drug Resistance, Bacterial
  • Ceftriaxone
  • Biochemistry & Molecular Biology
  • Binding Sites
  • Amino Acid Substitution
  • 34 Chemical sciences
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Fenton, B. A., Tomberg, J., Sciandra, C. A., Nicholas, R. A., Davies, C., & Zhou, P. (2021). Mutations in PBP2 from ceftriaxone-resistant Neisseria gonorrhoeae alter the dynamics of the β3-β4 loop to favor a low-affinity drug-binding state. J Biol Chem, 297(4), 101188. https://doi.org/10.1016/j.jbc.2021.101188
Fenton, Benjamin A., Joshua Tomberg, Carly A. Sciandra, Robert A. Nicholas, Christopher Davies, and Pei Zhou. “Mutations in PBP2 from ceftriaxone-resistant Neisseria gonorrhoeae alter the dynamics of the β3-β4 loop to favor a low-affinity drug-binding state.J Biol Chem 297, no. 4 (October 2021): 101188. https://doi.org/10.1016/j.jbc.2021.101188.
Fenton BA, Tomberg J, Sciandra CA, Nicholas RA, Davies C, Zhou P. Mutations in PBP2 from ceftriaxone-resistant Neisseria gonorrhoeae alter the dynamics of the β3-β4 loop to favor a low-affinity drug-binding state. J Biol Chem. 2021 Oct;297(4):101188.
Fenton, Benjamin A., et al. “Mutations in PBP2 from ceftriaxone-resistant Neisseria gonorrhoeae alter the dynamics of the β3-β4 loop to favor a low-affinity drug-binding state.J Biol Chem, vol. 297, no. 4, Oct. 2021, p. 101188. Pubmed, doi:10.1016/j.jbc.2021.101188.
Fenton BA, Tomberg J, Sciandra CA, Nicholas RA, Davies C, Zhou P. Mutations in PBP2 from ceftriaxone-resistant Neisseria gonorrhoeae alter the dynamics of the β3-β4 loop to favor a low-affinity drug-binding state. J Biol Chem. 2021 Oct;297(4):101188.

Published In

J Biol Chem

DOI

EISSN

1083-351X

Publication Date

October 2021

Volume

297

Issue

4

Start / End Page

101188

Location

United States

Related Subject Headings

  • Serine-Type D-Ala-D-Ala Carboxypeptidase
  • Protein Structure, Secondary
  • Neisseria gonorrhoeae
  • Mutation, Missense
  • Drug Resistance, Bacterial
  • Ceftriaxone
  • Biochemistry & Molecular Biology
  • Binding Sites
  • Amino Acid Substitution
  • 34 Chemical sciences