A supervised machine learning semantic segmentation approach for detecting artifacts in plethysmography signals from wearables.

Journal Article (Journal Article)

Objective. Wearable devices equipped with plethysmography (PPG) sensors provided a low-cost, long-term solution to early diagnosis and continuous screening of heart conditions. However PPG signals collected from such devices often suffer from corruption caused by artifacts. The objective of this study is to develop an effective supervised algorithm to locate the regions of artifacts within PPG signals.Approach. We treat artifact detection as a 1D segmentation problem. We solve it via a novel combination of an active-contour-based loss and an adapted U-Net architecture. The proposed algorithm was trained on the PPG DaLiA training set, and further evaluated on the PPG DaLiA testing set, WESAD dataset and TROIKA dataset.Main results. We evaluated with the DICE score, a well-established metric for segmentation accuracy evaluation in the field of computer vision. The proposed method outperforms baseline methods on all three datasets by a large margin (≈7 percentage points above the next best method). On the PPG DaLiA testing set, WESAD dataset and TROIKA dataset, the proposed method achieved 0.8734 ± 0.0018, 0.9114 ± 0.0033 and 0.8050 ± 0.0116 respectively. The next best method only achieved 0.8068 ± 0.0014, 0.8446 ± 0.0013 and 0.7247 ± 0.0050.Significance. The proposed method is able to pinpoint exact locations of artifacts with high precision; in the past, we had only a binary classification of whether a PPG signal has good or poor quality. This more nuanced information will be critical to further inform the design of algorithms to detect cardiac arrhythmia.

Full Text

Duke Authors

Cited Authors

  • Guo, Z; Ding, C; Hu, X; Rudin, C

Published Date

  • December 29, 2021

Published In

Volume / Issue

  • 42 / 12

PubMed ID

  • 34794126

Electronic International Standard Serial Number (EISSN)

  • 1361-6579

International Standard Serial Number (ISSN)

  • 0967-3334

Digital Object Identifier (DOI)

  • 10.1088/1361-6579/ac3b3d


  • eng