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Characterization of ATP-independent ERK inhibitors identified through in silico analysis of the active ERK2 structure.

Publication ,  Journal Article
Chen, F; Hancock, CN; Macias, AT; Joh, J; Still, K; Zhong, S; MacKerell, AD; Shapiro, P
Published in: Bioorg Med Chem Lett
December 15, 2006

The extracellular signal-regulated kinases (ERK1 and ERK2) are important mediators of cell proliferation. Constitutive activation of the ERK proteins plays a critical role in the proliferation of many human cancers. Taking advantage of recently identified substrate docking domains on ERK2, we have used computer-aided drug design (CADD) to identify novel low molecular weight compounds that interact with ERK2 in an ATP-independent manner and disrupt substrate-specific interactions. In the current study, a CADD screen of the 3D structure of active phosphorylated ERK2 protein was used to identify inhibitory compounds. We tested 13 compounds identified by the CADD screen in ERK-specific phosphorylation, cell proliferation, and binding assays. Of the 13 compounds tested, 4 compounds strongly inhibited ERK-mediated phosphorylation of ribosomal S6 kinase-1 (Rsk-1) and/or the transcription factor Elk-1 and inhibited the proliferation of HeLa cervical carcinoma cells with IC(50) values in the 2-10 microM range. These studies demonstrate that CADD can be used to identify lead compounds for development of novel non-ATP-dependent inhibitors selective for active ERK and its interactions with substrates involved in cancer cell proliferation.

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Published In

Bioorg Med Chem Lett

DOI

ISSN

0960-894X

Publication Date

December 15, 2006

Volume

16

Issue

24

Start / End Page

6281 / 6287

Location

England

Related Subject Headings

  • Protein Kinase Inhibitors
  • Protein Conformation
  • Models, Molecular
  • Mitogen-Activated Protein Kinase 3
  • Mitogen-Activated Protein Kinase 1
  • Medicinal & Biomolecular Chemistry
  • Kinetics
  • Binding Sites
  • Adenosine Triphosphate
  • 3405 Organic chemistry
 

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Chen, F., Hancock, C. N., Macias, A. T., Joh, J., Still, K., Zhong, S., … Shapiro, P. (2006). Characterization of ATP-independent ERK inhibitors identified through in silico analysis of the active ERK2 structure. Bioorg Med Chem Lett, 16(24), 6281–6287. https://doi.org/10.1016/j.bmcl.2006.09.038
Chen, Fengming, Chad N. Hancock, Alba T. Macias, Joseph Joh, Kimberly Still, Shijun Zhong, Alexander D. MacKerell, and Paul Shapiro. “Characterization of ATP-independent ERK inhibitors identified through in silico analysis of the active ERK2 structure.Bioorg Med Chem Lett 16, no. 24 (December 15, 2006): 6281–87. https://doi.org/10.1016/j.bmcl.2006.09.038.
Chen F, Hancock CN, Macias AT, Joh J, Still K, Zhong S, et al. Characterization of ATP-independent ERK inhibitors identified through in silico analysis of the active ERK2 structure. Bioorg Med Chem Lett. 2006 Dec 15;16(24):6281–7.
Chen, Fengming, et al. “Characterization of ATP-independent ERK inhibitors identified through in silico analysis of the active ERK2 structure.Bioorg Med Chem Lett, vol. 16, no. 24, Dec. 2006, pp. 6281–87. Pubmed, doi:10.1016/j.bmcl.2006.09.038.
Chen F, Hancock CN, Macias AT, Joh J, Still K, Zhong S, MacKerell AD, Shapiro P. Characterization of ATP-independent ERK inhibitors identified through in silico analysis of the active ERK2 structure. Bioorg Med Chem Lett. 2006 Dec 15;16(24):6281–6287.
Journal cover image

Published In

Bioorg Med Chem Lett

DOI

ISSN

0960-894X

Publication Date

December 15, 2006

Volume

16

Issue

24

Start / End Page

6281 / 6287

Location

England

Related Subject Headings

  • Protein Kinase Inhibitors
  • Protein Conformation
  • Models, Molecular
  • Mitogen-Activated Protein Kinase 3
  • Mitogen-Activated Protein Kinase 1
  • Medicinal & Biomolecular Chemistry
  • Kinetics
  • Binding Sites
  • Adenosine Triphosphate
  • 3405 Organic chemistry