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Geographic patterns of microsatellite variation in Boechera stricta, a close relative of Arabidopsis.

Publication ,  Journal Article
Song, B-H; Clauss, MJ; Pepper, A; Mitchell-Olds, T
Published in: Molecular ecology
February 2006

The genus Boechera is a widespread North American group with great potential for studies of ecology and evolution: Boechera is closely related to Arabidopsis and exhibits different ecological and reproductive strategies. Boechera stricta (previously Arabis drummondii) is a morphologically and genetically well-defined, perennial crucifer species. Fifteen natural populations of diploid individuals from the Rocky Mountains were analysed using 21 microsatellite loci. In accordance with our expectation for this predominately inbreeding species, a high F IS value (0.89) was observed. Furthermore, populations of B. stricta were highly differentiated, as indicated by F ST = 0.56. Three clusters were identified using structure- the majority of populations belonged to either the Northern or Southern cluster. Together, the north-south partitioning and evenness of genetic variation across the two clusters suggested multiple refugia for this perennial herb in the Rocky Mountains. Pleistocene glaciation, together with the topographically and climatologically heterogeneous cordillera, has profoundly influenced the genetic architecture of B. stricta. Genetic population structure was also influenced by relatively recent genome admixture at two levels: within species (involving individuals from the Northern and Southern clusters) and between species (with the hybridization of B. stricta and Boechera holboellii). This complexity of population structure at presumably neutral microsatellite loci located throughout the genome in B. stricta provides a baseline against which to test whether functional genetic variation is undergoing local adaptive evolution throughout the natural species range.

Duke Scholars

Published In

Molecular ecology

DOI

EISSN

1365-294X

ISSN

0962-1083

Publication Date

February 2006

Volume

15

Issue

2

Start / End Page

357 / 369

Related Subject Headings

  • Northwestern United States
  • Midwestern United States
  • Microsatellite Repeats
  • Genetics, Population
  • Genetic Variation
  • Evolutionary Biology
  • Diploidy
  • Brassicaceae
  • 31 Biological sciences
  • 06 Biological Sciences
 

Citation

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MLA
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Song, B.-H., Clauss, M. J., Pepper, A., & Mitchell-Olds, T. (2006). Geographic patterns of microsatellite variation in Boechera stricta, a close relative of Arabidopsis. Molecular Ecology, 15(2), 357–369. https://doi.org/10.1111/j.1365-294x.2005.02817.x
Song, Bao-Hua, Maria J. Clauss, Alan Pepper, and Thomas Mitchell-Olds. “Geographic patterns of microsatellite variation in Boechera stricta, a close relative of Arabidopsis.Molecular Ecology 15, no. 2 (February 2006): 357–69. https://doi.org/10.1111/j.1365-294x.2005.02817.x.
Song B-H, Clauss MJ, Pepper A, Mitchell-Olds T. Geographic patterns of microsatellite variation in Boechera stricta, a close relative of Arabidopsis. Molecular ecology. 2006 Feb;15(2):357–69.
Song, Bao-Hua, et al. “Geographic patterns of microsatellite variation in Boechera stricta, a close relative of Arabidopsis.Molecular Ecology, vol. 15, no. 2, Feb. 2006, pp. 357–69. Epmc, doi:10.1111/j.1365-294x.2005.02817.x.
Song B-H, Clauss MJ, Pepper A, Mitchell-Olds T. Geographic patterns of microsatellite variation in Boechera stricta, a close relative of Arabidopsis. Molecular ecology. 2006 Feb;15(2):357–369.
Journal cover image

Published In

Molecular ecology

DOI

EISSN

1365-294X

ISSN

0962-1083

Publication Date

February 2006

Volume

15

Issue

2

Start / End Page

357 / 369

Related Subject Headings

  • Northwestern United States
  • Midwestern United States
  • Microsatellite Repeats
  • Genetics, Population
  • Genetic Variation
  • Evolutionary Biology
  • Diploidy
  • Brassicaceae
  • 31 Biological sciences
  • 06 Biological Sciences