Promoter prediction on a genomic scale--the Adh experience.
Publication
, Journal Article
Ohler, U
Published in: Genome Res
April 2000
We describe our statistical system for promoter recognition in genomic DNA with which we took part in the Genome Annotation Assessment Project (GASP1). We applied two versions of the system: the first uses a region-based approach toward transcription start site identification, namely, interpolated Markov chains; the second was a hybrid approach combining regions and signals within a stochastic segment model. We compare the results of both versions with each other and examine how well the application on a genomic scale compares with the results we previously obtained on smaller data sets.
Duke Scholars
Published In
Genome Res
DOI
ISSN
1088-9051
Publication Date
April 2000
Volume
10
Issue
4
Start / End Page
539 / 542
Location
United States
Related Subject Headings
- Software
- Sequence Analysis, DNA
- Promoter Regions, Genetic
- Probability
- Genes, Insect
- Drosophila melanogaster
- Databases, Factual
- Bioinformatics
- Animals
- Alcohol Dehydrogenase
Citation
APA
Chicago
ICMJE
MLA
NLM
Ohler, U. (2000). Promoter prediction on a genomic scale--the Adh experience. Genome Res, 10(4), 539–542. https://doi.org/10.1101/gr.10.4.539
Ohler, U. “Promoter prediction on a genomic scale--the Adh experience.” Genome Res 10, no. 4 (April 2000): 539–42. https://doi.org/10.1101/gr.10.4.539.
Ohler U. Promoter prediction on a genomic scale--the Adh experience. Genome Res. 2000 Apr;10(4):539–42.
Ohler, U. “Promoter prediction on a genomic scale--the Adh experience.” Genome Res, vol. 10, no. 4, Apr. 2000, pp. 539–42. Pubmed, doi:10.1101/gr.10.4.539.
Ohler U. Promoter prediction on a genomic scale--the Adh experience. Genome Res. 2000 Apr;10(4):539–542.
Published In
Genome Res
DOI
ISSN
1088-9051
Publication Date
April 2000
Volume
10
Issue
4
Start / End Page
539 / 542
Location
United States
Related Subject Headings
- Software
- Sequence Analysis, DNA
- Promoter Regions, Genetic
- Probability
- Genes, Insect
- Drosophila melanogaster
- Databases, Factual
- Bioinformatics
- Animals
- Alcohol Dehydrogenase