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Neuronal assembly detection and cell membership specification by principal component analysis.

Publication ,  Journal Article
Lopes-dos-Santos, V; Conde-Ocazionez, S; Nicolelis, MAL; Ribeiro, ST; Tort, ABL
Published in: PLoS One
2011

In 1949, Donald Hebb postulated that assemblies of synchronously activated neurons are the elementary units of information processing in the brain. Despite being one of the most influential theories in neuroscience, Hebb's cell assembly hypothesis only started to become testable in the past two decades due to technological advances. However, while the technology for the simultaneous recording of large neuronal populations undergoes fast development, there is still a paucity of analytical methods that can properly detect and track the activity of cell assemblies. Here we describe a principal component-based method that is able to (1) identify all cell assemblies present in the neuronal population investigated, (2) determine the number of neurons involved in ensemble activity, (3) specify the precise identity of the neurons pertaining to each cell assembly, and (4) unravel the time course of the individual activity of multiple assemblies. Application of the method to multielectrode recordings of awake and behaving rats revealed that assemblies detected in the cerebral cortex and hippocampus typically contain overlapping neurons. The results indicate that the PCA method presented here is able to properly detect, track and specify neuronal assemblies, irrespective of overlapping membership.

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Published In

PLoS One

DOI

EISSN

1932-6203

Publication Date

2011

Volume

6

Issue

6

Start / End Page

e20996

Location

United States

Related Subject Headings

  • Principal Component Analysis
  • Neurons
  • General Science & Technology
  • Algorithms
 

Citation

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ICMJE
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Lopes-dos-Santos, V., Conde-Ocazionez, S., Nicolelis, M. A. L., Ribeiro, S. T., & Tort, A. B. L. (2011). Neuronal assembly detection and cell membership specification by principal component analysis. PLoS One, 6(6), e20996. https://doi.org/10.1371/journal.pone.0020996
Lopes-dos-Santos, Vítor, Sergio Conde-Ocazionez, Miguel A. L. Nicolelis, Sidarta T. Ribeiro, and Adriano B. L. Tort. “Neuronal assembly detection and cell membership specification by principal component analysis.PLoS One 6, no. 6 (2011): e20996. https://doi.org/10.1371/journal.pone.0020996.
Lopes-dos-Santos V, Conde-Ocazionez S, Nicolelis MAL, Ribeiro ST, Tort ABL. Neuronal assembly detection and cell membership specification by principal component analysis. PLoS One. 2011;6(6):e20996.
Lopes-dos-Santos, Vítor, et al. “Neuronal assembly detection and cell membership specification by principal component analysis.PLoS One, vol. 6, no. 6, 2011, p. e20996. Pubmed, doi:10.1371/journal.pone.0020996.
Lopes-dos-Santos V, Conde-Ocazionez S, Nicolelis MAL, Ribeiro ST, Tort ABL. Neuronal assembly detection and cell membership specification by principal component analysis. PLoS One. 2011;6(6):e20996.

Published In

PLoS One

DOI

EISSN

1932-6203

Publication Date

2011

Volume

6

Issue

6

Start / End Page

e20996

Location

United States

Related Subject Headings

  • Principal Component Analysis
  • Neurons
  • General Science & Technology
  • Algorithms