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Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility.

Publication ,  Journal Article
Tran-Viet, K-N; St Germain, E; Soler, V; Powell, C; Lim, S-H; Klemm, T; Saw, SM; Young, TL
Published in: Mol Vis
2012

PURPOSE: Myopia, or nearsightedness, is highly prevalent in Asian countries and is considered a serious public health issue globally. High-grade myopia can predispose individuals to myopic maculopathy, premature cataracts, retinal detachment, and glaucoma. A recent study implicated zinc finger protein 644 isoform 1 (ZNF644) variants with non-syndromic high-grade myopia in a Chinese-Asian population. Herein we focused on investigating the role for ZNF644 variants in high-grade myopia in a United States (US) cohort. METHODS: DNA from a case cohort of 131 subject participants diagnosed with high-grade myopia was screened for ZNF644 variants. Spherical refractive error of -≤-6.00 diopters (D) in at least one eye was defined as affected. All coding, intron/exon boundaries were screened using Sanger sequencing. Single nucleotide allele frequencies were determined by screening 672 ethnically matched controls. RESULTS: Sequencing analysis did not detect previously reported mutations. However, our analysis identified 2 novel single nucleotide variants (c.725C>T, c.821A>T) in 2 high-grade myopia individuals- one Caucasian and one African American, respectively. These variants were not found in normal controls. A rare variant - dbsSNP132 (rs12117237→c.2119A>G) - with a minor allele frequency of 0.2% was present in 6 additional cases, but was also present in 5 controls. CONCLUSIONS: Our study has identified two novel variants in ZNF644 associated with high-grade myopia in a US cohort. Our results suggest that ZNF644 may play a role in myopia development.

Duke Scholars

Published In

Mol Vis

EISSN

1090-0535

Publication Date

2012

Volume

18

Start / End Page

937 / 944

Location

United States

Related Subject Headings

  • Zinc Fingers
  • White People
  • United States
  • Ubiquitin-Protein Ligases
  • Trans-Activators
  • Sequence Analysis, DNA
  • Polymorphism, Single Nucleotide
  • Pedigree
  • Ophthalmology & Optometry
  • Myopia
 

Citation

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Tran-Viet, K.-N., St Germain, E., Soler, V., Powell, C., Lim, S.-H., Klemm, T., … Young, T. L. (2012). Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility. Mol Vis, 18, 937–944.
Tran-Viet, Khanh-Nhat, Elizabeth St Germain, Vincent Soler, Caldwell Powell, Sing-Hui Lim, Thomas Klemm, Seang Mei Saw, and Terri L. Young. “Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility.Mol Vis 18 (2012): 937–44.
Tran-Viet K-N, St Germain E, Soler V, Powell C, Lim S-H, Klemm T, et al. Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility. Mol Vis. 2012;18:937–44.
Tran-Viet, Khanh-Nhat, et al. “Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility.Mol Vis, vol. 18, 2012, pp. 937–44.
Tran-Viet K-N, St Germain E, Soler V, Powell C, Lim S-H, Klemm T, Saw SM, Young TL. Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility. Mol Vis. 2012;18:937–944.

Published In

Mol Vis

EISSN

1090-0535

Publication Date

2012

Volume

18

Start / End Page

937 / 944

Location

United States

Related Subject Headings

  • Zinc Fingers
  • White People
  • United States
  • Ubiquitin-Protein Ligases
  • Trans-Activators
  • Sequence Analysis, DNA
  • Polymorphism, Single Nucleotide
  • Pedigree
  • Ophthalmology & Optometry
  • Myopia