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Constrained sparse functional connectivity networks for MCI classification

Publication ,  Journal Article
Wee, CY; Yap, PT; Zhang, D; Wang, L; Shen, D
Published in: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
January 1, 2012

© Springer-Verlag Berlin Heidelberg 2012. Mild cognitive impairment (MCI) is difficult to diagnose due to its subtlety. Recent emergence of advanced network analysis techniques utilizing resting-state functional Magnetic Resonance Imaging (rs-fMRI) has made the understanding of neurological disorders more comprehensively at a whole-brain connectivity level. However, inferring effective brain connectivity from fMRI data is a challenging task, particularly when the ultimate goal is to obtain good control-patient classification performance. Incorporating sparsity into connectivity modeling can potentially produce results that are biologically more meaningful since most biologically networks are formed by a relatively few number of connections. However, this constraint, when applied at an individual level, will degrade classification performance due to inter-subject variability. To address this problem, we consider a constrained sparse linear regression model associated with the least absolute shrinkage and selection operator (LASSO). Specifically, we introduced sparsity into brain connectivity via l1-norm penalization, and ensured consistent non-zero connections across subjects via l2-norm penalization. Our results demonstrate that the constrained sparse network gives better classification performance than the conventional correlation-based network, indicating its greater sensitivity to early stage brain pathologies.

Duke Scholars

Published In

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

EISSN

1611-3349

ISSN

0302-9743

Publication Date

January 1, 2012

Volume

7511 LNCS

Start / End Page

212 / 219

Related Subject Headings

  • Artificial Intelligence & Image Processing
  • 46 Information and computing sciences
 

Citation

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Wee, C. Y., Yap, P. T., Zhang, D., Wang, L., & Shen, D. (2012). Constrained sparse functional connectivity networks for MCI classification. Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 7511 LNCS, 212–219.
Wee, C. Y., P. T. Yap, D. Zhang, L. Wang, and D. Shen. “Constrained sparse functional connectivity networks for MCI classification.” Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 7511 LNCS (January 1, 2012): 212–19.
Wee CY, Yap PT, Zhang D, Wang L, Shen D. Constrained sparse functional connectivity networks for MCI classification. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2012 Jan 1;7511 LNCS:212–9.
Wee, C. Y., et al. “Constrained sparse functional connectivity networks for MCI classification.” Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 7511 LNCS, Jan. 2012, pp. 212–19.
Wee CY, Yap PT, Zhang D, Wang L, Shen D. Constrained sparse functional connectivity networks for MCI classification. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2012 Jan 1;7511 LNCS:212–219.

Published In

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

EISSN

1611-3349

ISSN

0302-9743

Publication Date

January 1, 2012

Volume

7511 LNCS

Start / End Page

212 / 219

Related Subject Headings

  • Artificial Intelligence & Image Processing
  • 46 Information and computing sciences