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Efficient purging of deleterious mutations in plants with haploid selfing.

Publication ,  Journal Article
Szövényi, P; Devos, N; Weston, DJ; Yang, X; Hock, Z; Shaw, JA; Shimizu, KK; McDaniel, SF; Wagner, A
Published in: Genome biology and evolution
May 2014

In diploid organisms, selfing reduces the efficiency of selection in removing deleterious mutations from a population. This need not be the case for all organisms. Some plants, for example, undergo an extreme form of selfing known as intragametophytic selfing, which immediately exposes all recessive deleterious mutations in a parental genome to selective purging. Here, we ask how effectively deleterious mutations are removed from such plants. Specifically, we study the extent to which deleterious mutations accumulate in a predominantly selfing and a predominantly outcrossing pair of moss species, using genome-wide transcriptome data. We find that the selfing species purge significantly more nonsynonymous mutations, as well as a greater proportion of radical amino acid changes which alter physicochemical properties of amino acids. Moreover, their purging of deleterious mutation is especially strong in conserved regions of protein-coding genes. Our observations show that selfing need not impede but can even accelerate the removal of deleterious mutations, and do so on a genome-wide scale.

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Published In

Genome biology and evolution

DOI

EISSN

1759-6653

ISSN

1759-6653

Publication Date

May 2014

Volume

6

Issue

5

Start / End Page

1238 / 1252

Related Subject Headings

  • Transcriptome
  • Self-Fertilization
  • Selection, Genetic
  • Pollination
  • Mutation
  • High-Throughput Nucleotide Sequencing
  • Haploidy
  • Diploidy
  • Developmental Biology
  • Conserved Sequence
 

Citation

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Szövényi, P., Devos, N., Weston, D. J., Yang, X., Hock, Z., Shaw, J. A., … Wagner, A. (2014). Efficient purging of deleterious mutations in plants with haploid selfing. Genome Biology and Evolution, 6(5), 1238–1252. https://doi.org/10.1093/gbe/evu099
Szövényi, Péter, Nicolas Devos, David J. Weston, Xiaohan Yang, Zsófia Hock, Jonathan A. Shaw, Kentaro K. Shimizu, Stuart F. McDaniel, and Andreas Wagner. “Efficient purging of deleterious mutations in plants with haploid selfing.Genome Biology and Evolution 6, no. 5 (May 2014): 1238–52. https://doi.org/10.1093/gbe/evu099.
Szövényi P, Devos N, Weston DJ, Yang X, Hock Z, Shaw JA, et al. Efficient purging of deleterious mutations in plants with haploid selfing. Genome biology and evolution. 2014 May;6(5):1238–52.
Szövényi, Péter, et al. “Efficient purging of deleterious mutations in plants with haploid selfing.Genome Biology and Evolution, vol. 6, no. 5, May 2014, pp. 1238–52. Epmc, doi:10.1093/gbe/evu099.
Szövényi P, Devos N, Weston DJ, Yang X, Hock Z, Shaw JA, Shimizu KK, McDaniel SF, Wagner A. Efficient purging of deleterious mutations in plants with haploid selfing. Genome biology and evolution. 2014 May;6(5):1238–1252.
Journal cover image

Published In

Genome biology and evolution

DOI

EISSN

1759-6653

ISSN

1759-6653

Publication Date

May 2014

Volume

6

Issue

5

Start / End Page

1238 / 1252

Related Subject Headings

  • Transcriptome
  • Self-Fertilization
  • Selection, Genetic
  • Pollination
  • Mutation
  • High-Throughput Nucleotide Sequencing
  • Haploidy
  • Diploidy
  • Developmental Biology
  • Conserved Sequence