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Elucidating the Molecular Composition of Cartilage by Proteomics.

Publication ,  Journal Article
Hsueh, M-F; Khabut, A; Kjellström, S; Önnerfjord, P; Kraus, VB
Published in: J Proteome Res
February 5, 2016

Articular cartilage consists of chondrocytes and two major components, a collagen-rich framework and highly abundant proteoglycans. Most prior studies defining the zonal distribution of cartilage have extracted proteins with guanidine-HCl. However, an unextracted collagen-rich residual is left after extraction. In addition, the high abundance of anionic polysaccharide molecules extracted from cartilage adversely affects the chromatographic separation. In this study, we established a method for removing chondrocytes from cartilage sections with minimal extracellular matrix protein loss. The addition of surfactant to guanidine-HCl extraction buffer improved protein solubility. Ultrafiltration removed interference from polysaccharides and salts. Almost four-times more collagen peptides were extracted by the in situ trypsin digestion method. However, as expected, proteoglycans were more abundant within the guanidine-HCl extraction. These different methods were used to extract cartilage sections from different cartilage layers (superficial, intermediate, and deep), joint types (knee and hip), and disease states (healthy and osteoarthritic), and the extractions were evaluated by quantitative and qualitative proteomic analyses. The results of this study led to the identifications of the potential biomarkers of osteoarthritis (OA), OA progression, and the joint specific biomarkers.

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Published In

J Proteome Res

DOI

EISSN

1535-3907

Publication Date

February 5, 2016

Volume

15

Issue

2

Start / End Page

374 / 388

Location

United States

Related Subject Headings

  • Surface-Active Agents
  • Reproducibility of Results
  • Proteomics
  • Proteome
  • Proteoglycans
  • Osteoarthritis
  • Mass Spectrometry
  • Knee Joint
  • Humans
  • Hip Joint
 

Citation

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ICMJE
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Hsueh, M.-F., Khabut, A., Kjellström, S., Önnerfjord, P., & Kraus, V. B. (2016). Elucidating the Molecular Composition of Cartilage by Proteomics. J Proteome Res, 15(2), 374–388. https://doi.org/10.1021/acs.jproteome.5b00946
Hsueh, Ming-Feng, Areej Khabut, Sven Kjellström, Patrik Önnerfjord, and Virginia Byers Kraus. “Elucidating the Molecular Composition of Cartilage by Proteomics.J Proteome Res 15, no. 2 (February 5, 2016): 374–88. https://doi.org/10.1021/acs.jproteome.5b00946.
Hsueh M-F, Khabut A, Kjellström S, Önnerfjord P, Kraus VB. Elucidating the Molecular Composition of Cartilage by Proteomics. J Proteome Res. 2016 Feb 5;15(2):374–88.
Hsueh, Ming-Feng, et al. “Elucidating the Molecular Composition of Cartilage by Proteomics.J Proteome Res, vol. 15, no. 2, Feb. 2016, pp. 374–88. Pubmed, doi:10.1021/acs.jproteome.5b00946.
Hsueh M-F, Khabut A, Kjellström S, Önnerfjord P, Kraus VB. Elucidating the Molecular Composition of Cartilage by Proteomics. J Proteome Res. 2016 Feb 5;15(2):374–388.
Journal cover image

Published In

J Proteome Res

DOI

EISSN

1535-3907

Publication Date

February 5, 2016

Volume

15

Issue

2

Start / End Page

374 / 388

Location

United States

Related Subject Headings

  • Surface-Active Agents
  • Reproducibility of Results
  • Proteomics
  • Proteome
  • Proteoglycans
  • Osteoarthritis
  • Mass Spectrometry
  • Knee Joint
  • Humans
  • Hip Joint