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Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation.

Publication ,  Journal Article
Tarpey, PS; Raymond, FL; Nguyen, LS; Rodriguez, J; Hackett, A; Vandeleur, L; Smith, R; Shoubridge, C; Edkins, S; Stevens, C; O'Meara, S ...
Published in: Nat Genet
September 2007

Nonsense-mediated mRNA decay (NMD) is of universal biological significance. It has emerged as an important global RNA, DNA and translation regulatory pathway. By systematically sequencing 737 genes (annotated in the Vertebrate Genome Annotation database) on the human X chromosome in 250 families with X-linked mental retardation, we identified mutations in the UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B) leading to protein truncations in three families: two with the Lujan-Fryns phenotype and one with the FG phenotype. We also identified a missense mutation in another family with nonsyndromic mental retardation. Three mutations lead to the introduction of a premature termination codon and subsequent NMD of mutant UPF3B mRNA. Protein blot analysis using lymphoblastoid cell lines from affected individuals showed an absence of the UPF3B protein in two families. The UPF3B protein is an important component of the NMD surveillance machinery. Our results directly implicate abnormalities of NMD in human disease and suggest at least partial redundancy of NMD pathways.

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Published In

Nat Genet

DOI

ISSN

1061-4036

Publication Date

September 2007

Volume

39

Issue

9

Start / End Page

1127 / 1133

Location

United States

Related Subject Headings

  • Syndrome
  • Sequence Homology, Amino Acid
  • Reverse Transcriptase Polymerase Chain Reaction
  • RNA-Binding Proteins
  • RNA, Messenger
  • RNA Stability
  • Pedigree
  • Mutation
  • Molecular Sequence Data
  • Mental Retardation, X-Linked
 

Citation

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Tarpey, P. S., Raymond, F. L., Nguyen, L. S., Rodriguez, J., Hackett, A., Vandeleur, L., … Gécz, J. (2007). Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation. Nat Genet, 39(9), 1127–1133. https://doi.org/10.1038/ng2100
Tarpey, Patrick S., F Lucy Raymond, Lam S. Nguyen, Jayson Rodriguez, Anna Hackett, Lucianne Vandeleur, Raffaella Smith, et al. “Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation.Nat Genet 39, no. 9 (September 2007): 1127–33. https://doi.org/10.1038/ng2100.
Tarpey PS, Raymond FL, Nguyen LS, Rodriguez J, Hackett A, Vandeleur L, et al. Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation. Nat Genet. 2007 Sep;39(9):1127–33.
Tarpey, Patrick S., et al. “Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation.Nat Genet, vol. 39, no. 9, Sept. 2007, pp. 1127–33. Pubmed, doi:10.1038/ng2100.
Tarpey PS, Raymond FL, Nguyen LS, Rodriguez J, Hackett A, Vandeleur L, Smith R, Shoubridge C, Edkins S, Stevens C, O’Meara S, Tofts C, Barthorpe S, Buck G, Cole J, Halliday K, Hills K, Jones D, Mironenko T, Perry J, Varian J, West S, Widaa S, Teague J, Dicks E, Butler A, Menzies A, Richardson D, Jenkinson A, Shepherd R, Raine K, Moon J, Luo Y, Parnau J, Bhat SS, Gardner A, Corbett M, Brooks D, Thomas P, Parkinson-Lawrence E, Porteous ME, Warner JP, Sanderson T, Pearson P, Simensen RJ, Skinner C, Hoganson G, Superneau D, Wooster R, Bobrow M, Turner G, Stevenson RE, Schwartz CE, Futreal PA, Srivastava AK, Stratton MR, Gécz J. Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation. Nat Genet. 2007 Sep;39(9):1127–1133.

Published In

Nat Genet

DOI

ISSN

1061-4036

Publication Date

September 2007

Volume

39

Issue

9

Start / End Page

1127 / 1133

Location

United States

Related Subject Headings

  • Syndrome
  • Sequence Homology, Amino Acid
  • Reverse Transcriptase Polymerase Chain Reaction
  • RNA-Binding Proteins
  • RNA, Messenger
  • RNA Stability
  • Pedigree
  • Mutation
  • Molecular Sequence Data
  • Mental Retardation, X-Linked