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From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.

Publication ,  Journal Article
Naumann, EA; Fitzgerald, JE; Dunn, TW; Rihel, J; Sompolinsky, H; Engert, F
Published in: Cell
November 3, 2016

Detailed descriptions of brain-scale sensorimotor circuits underlying vertebrate behavior remain elusive. Recent advances in zebrafish neuroscience offer new opportunities to dissect such circuits via whole-brain imaging, behavioral analysis, functional perturbations, and network modeling. Here, we harness these tools to generate a brain-scale circuit model of the optomotor response, an orienting behavior evoked by visual motion. We show that such motion is processed by diverse neural response types distributed across multiple brain regions. To transform sensory input into action, these regions sequentially integrate eye- and direction-specific sensory streams, refine representations via interhemispheric inhibition, and demix locomotor instructions to independently drive turning and forward swimming. While experiments revealed many neural response types throughout the brain, modeling identified the dimensions of functional connectivity most critical for the behavior. We thus reveal how distributed neurons collaborate to generate behavior and illustrate a paradigm for distilling functional circuit models from whole-brain data.

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Published In

Cell

DOI

EISSN

1097-4172

Publication Date

November 3, 2016

Volume

167

Issue

4

Start / End Page

947 / 960.e20

Location

United States

Related Subject Headings

  • Zebrafish
  • Visual Perception
  • Swimming
  • Neurons
  • Neuroimaging
  • Neural Pathways
  • Feedback, Sensory
  • Developmental Biology
  • Brain
  • Animals
 

Citation

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Naumann, E. A., Fitzgerald, J. E., Dunn, T. W., Rihel, J., Sompolinsky, H., & Engert, F. (2016). From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response. Cell, 167(4), 947-960.e20. https://doi.org/10.1016/j.cell.2016.10.019
Naumann, Eva A., James E. Fitzgerald, Timothy W. Dunn, Jason Rihel, Haim Sompolinsky, and Florian Engert. “From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.Cell 167, no. 4 (November 3, 2016): 947-960.e20. https://doi.org/10.1016/j.cell.2016.10.019.
Naumann EA, Fitzgerald JE, Dunn TW, Rihel J, Sompolinsky H, Engert F. From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response. Cell. 2016 Nov 3;167(4):947-960.e20.
Naumann, Eva A., et al. “From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.Cell, vol. 167, no. 4, Nov. 2016, pp. 947-960.e20. Pubmed, doi:10.1016/j.cell.2016.10.019.
Naumann EA, Fitzgerald JE, Dunn TW, Rihel J, Sompolinsky H, Engert F. From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response. Cell. 2016 Nov 3;167(4):947-960.e20.
Journal cover image

Published In

Cell

DOI

EISSN

1097-4172

Publication Date

November 3, 2016

Volume

167

Issue

4

Start / End Page

947 / 960.e20

Location

United States

Related Subject Headings

  • Zebrafish
  • Visual Perception
  • Swimming
  • Neurons
  • Neuroimaging
  • Neural Pathways
  • Feedback, Sensory
  • Developmental Biology
  • Brain
  • Animals