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Comparative Analyses of Chromatin Landscape in White Adipose Tissue Suggest Humans May Have Less Beigeing Potential than Other Primates.

Publication ,  Journal Article
Swain-Lenz, D; Berrio, A; Safi, A; Crawford, GE; Wray, GA
Published in: Genome Biol Evol
July 1, 2019

Humans carry a much larger percentage of body fat than other primates. Despite the central role of adipose tissue in metabolism, little is known about the evolution of white adipose tissue in primates. Phenotypic divergence is often caused by genetic divergence in cis-regulatory regions. We examined the cis-regulatory landscape of fat during human origins by performing comparative analyses of chromatin accessibility in human and chimpanzee adipose tissue using rhesus macaque as an outgroup. We find that many regions that have decreased accessibility in humans are enriched for promoter and enhancer sequences, are depleted for signatures of negative selection, are located near genes involved with lipid metabolism, and contain a short sequence motif involved in the beigeing of fat, the process in which lipid-storing white adipocytes are transdifferentiated into thermogenic beige adipocytes. The collective closing of many putative regulatory regions associated with beigeing of fat suggests a mechanism that increases body fat in humans.

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Published In

Genome Biol Evol

DOI

EISSN

1759-6653

Publication Date

July 1, 2019

Volume

11

Issue

7

Start / End Page

1997 / 2008

Location

England

Related Subject Headings

  • Primates
  • Humans
  • Genomics
  • Developmental Biology
  • Animals
  • Adipose Tissue, White
  • Adipose Tissue
  • 3105 Genetics
  • 3104 Evolutionary biology
  • 3101 Biochemistry and cell biology
 

Citation

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Swain-Lenz, D., Berrio, A., Safi, A., Crawford, G. E., & Wray, G. A. (2019). Comparative Analyses of Chromatin Landscape in White Adipose Tissue Suggest Humans May Have Less Beigeing Potential than Other Primates. Genome Biol Evol, 11(7), 1997–2008. https://doi.org/10.1093/gbe/evz134
Swain-Lenz, Devjanee, Alejandro Berrio, Alexias Safi, Gregory E. Crawford, and Gregory A. Wray. “Comparative Analyses of Chromatin Landscape in White Adipose Tissue Suggest Humans May Have Less Beigeing Potential than Other Primates.Genome Biol Evol 11, no. 7 (July 1, 2019): 1997–2008. https://doi.org/10.1093/gbe/evz134.
Swain-Lenz D, Berrio A, Safi A, Crawford GE, Wray GA. Comparative Analyses of Chromatin Landscape in White Adipose Tissue Suggest Humans May Have Less Beigeing Potential than Other Primates. Genome Biol Evol. 2019 Jul 1;11(7):1997–2008.
Swain-Lenz, Devjanee, et al. “Comparative Analyses of Chromatin Landscape in White Adipose Tissue Suggest Humans May Have Less Beigeing Potential than Other Primates.Genome Biol Evol, vol. 11, no. 7, July 2019, pp. 1997–2008. Pubmed, doi:10.1093/gbe/evz134.
Swain-Lenz D, Berrio A, Safi A, Crawford GE, Wray GA. Comparative Analyses of Chromatin Landscape in White Adipose Tissue Suggest Humans May Have Less Beigeing Potential than Other Primates. Genome Biol Evol. 2019 Jul 1;11(7):1997–2008.
Journal cover image

Published In

Genome Biol Evol

DOI

EISSN

1759-6653

Publication Date

July 1, 2019

Volume

11

Issue

7

Start / End Page

1997 / 2008

Location

England

Related Subject Headings

  • Primates
  • Humans
  • Genomics
  • Developmental Biology
  • Animals
  • Adipose Tissue, White
  • Adipose Tissue
  • 3105 Genetics
  • 3104 Evolutionary biology
  • 3101 Biochemistry and cell biology