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Structural instability and divergence from conserved residues underlie intracellular retention of mammalian odorant receptors.

Publication ,  Journal Article
Ikegami, K; de March, CA; Nagai, MH; Ghosh, S; Do, M; Sharma, R; Bruguera, ES; Lu, YE; Fukutani, Y; Vaidehi, N; Yohda, M; Matsunami, H
Published in: Proc Natl Acad Sci U S A
February 11, 2020

Mammalian odorant receptors are a diverse and rapidly evolving set of G protein-coupled receptors expressed in olfactory cilia membranes. Most odorant receptors show little to no cell surface expression in nonolfactory cells due to endoplasmic reticulum retention, which has slowed down biochemical studies. Here we provide evidence that structural instability and divergence from conserved residues of individual odorant receptors underlie intracellular retention using a combination of large-scale screening of odorant receptors cell surface expression in heterologous cells, point mutations, structural modeling, and machine learning techniques. We demonstrate the importance of conserved residues by synthesizing consensus odorant receptors that show high levels of cell surface expression similar to conventional G protein-coupled receptors. Furthermore, we associate in silico structural instability with poor cell surface expression using molecular dynamics simulations. We propose an enhanced evolutionary capacitance of olfactory sensory neurons that enable the functional expression of odorant receptors with cryptic mutations.

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Published In

Proc Natl Acad Sci U S A

DOI

EISSN

1091-6490

Publication Date

February 11, 2020

Volume

117

Issue

6

Start / End Page

2957 / 2967

Location

United States

Related Subject Headings

  • Receptors, Odorant
  • Protein Stability
  • Olfactory Receptor Neurons
  • Molecular Dynamics Simulation
  • Mice
  • Humans
  • Cell Line
  • Animals
 

Citation

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Ikegami, K., de March, C. A., Nagai, M. H., Ghosh, S., Do, M., Sharma, R., … Matsunami, H. (2020). Structural instability and divergence from conserved residues underlie intracellular retention of mammalian odorant receptors. Proc Natl Acad Sci U S A, 117(6), 2957–2967. https://doi.org/10.1073/pnas.1915520117
Ikegami, Kentaro, Claire A. de March, Maira H. Nagai, Soumadwip Ghosh, Matthew Do, Ruchira Sharma, Elise S. Bruguera, et al. “Structural instability and divergence from conserved residues underlie intracellular retention of mammalian odorant receptors.Proc Natl Acad Sci U S A 117, no. 6 (February 11, 2020): 2957–67. https://doi.org/10.1073/pnas.1915520117.
Ikegami K, de March CA, Nagai MH, Ghosh S, Do M, Sharma R, et al. Structural instability and divergence from conserved residues underlie intracellular retention of mammalian odorant receptors. Proc Natl Acad Sci U S A. 2020 Feb 11;117(6):2957–67.
Ikegami, Kentaro, et al. “Structural instability and divergence from conserved residues underlie intracellular retention of mammalian odorant receptors.Proc Natl Acad Sci U S A, vol. 117, no. 6, Feb. 2020, pp. 2957–67. Pubmed, doi:10.1073/pnas.1915520117.
Ikegami K, de March CA, Nagai MH, Ghosh S, Do M, Sharma R, Bruguera ES, Lu YE, Fukutani Y, Vaidehi N, Yohda M, Matsunami H. Structural instability and divergence from conserved residues underlie intracellular retention of mammalian odorant receptors. Proc Natl Acad Sci U S A. 2020 Feb 11;117(6):2957–2967.
Journal cover image

Published In

Proc Natl Acad Sci U S A

DOI

EISSN

1091-6490

Publication Date

February 11, 2020

Volume

117

Issue

6

Start / End Page

2957 / 2967

Location

United States

Related Subject Headings

  • Receptors, Odorant
  • Protein Stability
  • Olfactory Receptor Neurons
  • Molecular Dynamics Simulation
  • Mice
  • Humans
  • Cell Line
  • Animals