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Computationally guided high-throughput design of self-assembling drug nanoparticles

Publication ,  Journal Article
Reker, D; Rybakova, Y; Kirtane, A; Cao, R; Yang, JW; Navamajiti, N; Gardner, A; Zhang, R; Esfandiary, T; L’Heureux, J; von Erlach, T; Hess, K ...
2019

Nanoformulations are transforming our capacity to effectively deliver and treat a myriad of conditions. However, many nanoformulation approaches still suffer from high production complexity and low drug loading. One potential solution relies on harnessing co-assembly of drugs and small molecular excipients to facilitate nanoparticle formation through solvent exchange without the need for chemical synthesis, generating nanoparticles with up to 95% drug loading. However, there is currently no understanding which of the millions of possible combinations of small molecules can result in the formation of these nanoparticles. Here we report the development of a high-throughput screening platform coupled to machine learning to enable the rapid evaluation of such nanoformulations. Our platform identified 101 novel self-assembling drug nanoparticles from 2.1 million pairings derived from 788 candidate drugs with one of 2686 excipients, spanning treatments for multiple diseases and often harnessing well-known food additives, vitamins, or approved drugs as carrier materials – with potential for accelerated approval and translation. Given their long-term stability and potential for clinical impact, we further characterize novel sorafenib-glycyrrhizin and terbinafine-taurocholic acid nanoparticles ex vivo and in vivo . We anticipate that this platform could accelerate the development of safer and more efficacious nanoformulations with high drug loadings for a wide range of therapeutics.

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2019
 

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Reker, D., Rybakova, Y., Kirtane, A., Cao, R., Yang, J. W., Navamajiti, N., … Traverso, G. (2019). Computationally guided high-throughput design of self-assembling drug nanoparticles. https://doi.org/10.1101/786251
Reker, Daniel, Yulia Rybakova, Ameya Kirtane, Ruonan Cao, Jee Won Yang, Natsuda Navamajiti, Apolonia Gardner, et al. “Computationally guided high-throughput design of self-assembling drug nanoparticles,” 2019. https://doi.org/10.1101/786251.
Reker D, Rybakova Y, Kirtane A, Cao R, Yang JW, Navamajiti N, et al. Computationally guided high-throughput design of self-assembling drug nanoparticles. 2019;
Reker D, Rybakova Y, Kirtane A, Cao R, Yang JW, Navamajiti N, Gardner A, Zhang R, Esfandiary T, L’Heureux J, von Erlach T, Smekalova E, Leboeuf D, Hess K, Lopes A, Rogner J, Collins J, Tamang S, Ishida K, Chamberlain P, Yun D, Lytoon-Jean A, Soule C, Cheah J, Hayward A, Langer R, Traverso G. Computationally guided high-throughput design of self-assembling drug nanoparticles. 2019;

DOI

Publication Date

2019