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Machine Learning Uncovers Food- and Excipient-Drug Interactions.

Publication ,  Journal Article
Reker, D; Shi, Y; Kirtane, AR; Hess, K; Zhong, GJ; Crane, E; Lin, C-H; Langer, R; Traverso, G
Published in: Cell reports
March 2020

Inactive ingredients and generally recognized as safe compounds are regarded by the US Food and Drug Administration (FDA) as benign for human consumption within specified dose ranges, but a growing body of research has revealed that many inactive ingredients might have unknown biological effects at these concentrations and might alter treatment outcomes. To speed up such discoveries, we apply state-of-the-art machine learning to delineate currently unknown biological effects of inactive ingredients-focusing on P-glycoprotein (P-gp) and uridine diphosphate-glucuronosyltransferase-2B7 (UGT2B7), two proteins that impact the pharmacokinetics of approximately 20% of FDA-approved drugs. Our platform identifies vitamin A palmitate and abietic acid as inhibitors of P-gp and UGT2B7, respectively; in silico, in vitro, ex vivo, and in vivo validations support these interactions. Our predictive framework can elucidate biological effects of commonly consumed chemical matter with implications on food- and excipient-drug interactions and functional drug formulation development.

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Published In

Cell reports

DOI

EISSN

2211-1247

ISSN

2211-1247

Publication Date

March 2020

Volume

30

Issue

11

Start / End Page

3710 / 3716.e4

Related Subject Headings

  • United States Food and Drug Administration
  • United States
  • Swine
  • Retinyl Esters
  • Pharmaceutical Preparations
  • Mice, Inbred BALB C
  • Machine Learning
  • Humans
  • Hep G2 Cells
  • Glucuronosyltransferase
 

Citation

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Reker, D., Shi, Y., Kirtane, A. R., Hess, K., Zhong, G. J., Crane, E., … Traverso, G. (2020). Machine Learning Uncovers Food- and Excipient-Drug Interactions. Cell Reports, 30(11), 3710-3716.e4. https://doi.org/10.1016/j.celrep.2020.02.094
Reker, Daniel, Yunhua Shi, Ameya R. Kirtane, Kaitlyn Hess, Grace J. Zhong, Evan Crane, Chih-Hsin Lin, Robert Langer, and Giovanni Traverso. “Machine Learning Uncovers Food- and Excipient-Drug Interactions.Cell Reports 30, no. 11 (March 2020): 3710-3716.e4. https://doi.org/10.1016/j.celrep.2020.02.094.
Reker D, Shi Y, Kirtane AR, Hess K, Zhong GJ, Crane E, et al. Machine Learning Uncovers Food- and Excipient-Drug Interactions. Cell reports. 2020 Mar;30(11):3710-3716.e4.
Reker, Daniel, et al. “Machine Learning Uncovers Food- and Excipient-Drug Interactions.Cell Reports, vol. 30, no. 11, Mar. 2020, pp. 3710-3716.e4. Epmc, doi:10.1016/j.celrep.2020.02.094.
Reker D, Shi Y, Kirtane AR, Hess K, Zhong GJ, Crane E, Lin C-H, Langer R, Traverso G. Machine Learning Uncovers Food- and Excipient-Drug Interactions. Cell reports. 2020 Mar;30(11):3710-3716.e4.
Journal cover image

Published In

Cell reports

DOI

EISSN

2211-1247

ISSN

2211-1247

Publication Date

March 2020

Volume

30

Issue

11

Start / End Page

3710 / 3716.e4

Related Subject Headings

  • United States Food and Drug Administration
  • United States
  • Swine
  • Retinyl Esters
  • Pharmaceutical Preparations
  • Mice, Inbred BALB C
  • Machine Learning
  • Humans
  • Hep G2 Cells
  • Glucuronosyltransferase