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Ignoring correlated activity causes a failure of retinal population codes.

Publication ,  Journal Article
Ruda, K; Zylberberg, J; Field, GD
Published in: Nat Commun
September 14, 2020

From starlight to sunlight, adaptation alters retinal output, changing both the signal and noise among populations of retinal ganglion cells (RGCs). Here we determine how these light level-dependent changes impact decoding of retinal output, testing the importance of accounting for RGC noise correlations to optimally read out retinal activity. We find that at moonlight conditions, correlated noise is greater and assuming independent noise severely diminishes decoding performance. In fact, assuming independence among a local population of RGCs produces worse decoding than using a single RGC, demonstrating a failure of population codes when correlated noise is substantial and ignored. We generalize these results with a simple model to determine what conditions dictate this failure of population processing. This work elucidates the circumstances in which accounting for noise correlations is necessary to take advantage of population-level codes and shows that sensory adaptation can strongly impact decoding requirements on downstream brain areas.

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Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

September 14, 2020

Volume

11

Issue

1

Start / End Page

4605

Location

England

Related Subject Headings

  • Retinal Ganglion Cells
  • Retina
  • Rats, Long-Evans
  • Photic Stimulation
  • Night Vision
  • Linear Models
  • Light
  • Bayes Theorem
  • Animals
  • Adaptation, Ocular
 

Citation

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Ruda, K., Zylberberg, J., & Field, G. D. (2020). Ignoring correlated activity causes a failure of retinal population codes. Nat Commun, 11(1), 4605. https://doi.org/10.1038/s41467-020-18436-2
Ruda, Kiersten, Joel Zylberberg, and Greg D. Field. “Ignoring correlated activity causes a failure of retinal population codes.Nat Commun 11, no. 1 (September 14, 2020): 4605. https://doi.org/10.1038/s41467-020-18436-2.
Ruda K, Zylberberg J, Field GD. Ignoring correlated activity causes a failure of retinal population codes. Nat Commun. 2020 Sep 14;11(1):4605.
Ruda, Kiersten, et al. “Ignoring correlated activity causes a failure of retinal population codes.Nat Commun, vol. 11, no. 1, Sept. 2020, p. 4605. Pubmed, doi:10.1038/s41467-020-18436-2.
Ruda K, Zylberberg J, Field GD. Ignoring correlated activity causes a failure of retinal population codes. Nat Commun. 2020 Sep 14;11(1):4605.

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

September 14, 2020

Volume

11

Issue

1

Start / End Page

4605

Location

England

Related Subject Headings

  • Retinal Ganglion Cells
  • Retina
  • Rats, Long-Evans
  • Photic Stimulation
  • Night Vision
  • Linear Models
  • Light
  • Bayes Theorem
  • Animals
  • Adaptation, Ocular