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Classification of PTSD and Non-PTSD Using Cortical Structural Measures in Machine Learning Analyses—Preliminary Study of ENIGMA-Psychiatric Genomics Consortium PTSD Workgroup

Publication ,  Conference
O’Leary, B; Shih, CH; Chen, T; Xie, H; Cotton, AS; Xu, KS; Morey, R; Wang, X
Published in: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
January 1, 2020

Classification and prediction of posttraumatic stress disorder (PTSD) based on brain imaging measures is important because it could aid in PTSD diagnosis and clinical management of PTSD. The goal of the present study was to test the effectiveness of using cortical morphological measures (i.e. volume, thickness, and surface area) to classify PTSD cases and controls on 3571 individuals from the ENIGMA-Psychiatric Genomics Consortium PTSD Workgroup, the largest PTSD neuroimaging dataset to date. We constructed 6 feature sets from different demographic variables (age and sex) and cortical morphological measures and used four machine learning algorithms for classification: logistic regression, random forest, support vector machine, and multi-layer perceptron. We found that classifiers trained using only cortical morphological measures (any one of volume, thickness, or surface area) performed better than classifiers trained using only demographic variables. Among all 6 feature sets, combining demographic variables and all three cortical morphological measures yielded the best prediction accuracy, with area under the receiver operating characteristic curve (ROC AUC) scores ranging from 0.615 for logistic regression to 0.648 for random forest. These findings suggest that using cortical morphological measures only has modest prediction power for PTSD classification. Future studies that wish to produce clinically and practically significant findings should consider using whole brain morphological measures, as well as incorporating other neuroimaging modalities and relevant clinical and behavioral symptoms.

Duke Scholars

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Published In

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

DOI

EISSN

1611-3349

ISSN

0302-9743

ISBN

9783030592769

Publication Date

January 1, 2020

Volume

12241 LNAI

Start / End Page

118 / 127

Related Subject Headings

  • Artificial Intelligence & Image Processing
  • 46 Information and computing sciences
 

Citation

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O’Leary, B., Shih, C. H., Chen, T., Xie, H., Cotton, A. S., Xu, K. S., … Wang, X. (2020). Classification of PTSD and Non-PTSD Using Cortical Structural Measures in Machine Learning Analyses—Preliminary Study of ENIGMA-Psychiatric Genomics Consortium PTSD Workgroup. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 12241 LNAI, pp. 118–127). https://doi.org/10.1007/978-3-030-59277-6_11
O’Leary, B., C. H. Shih, T. Chen, H. Xie, A. S. Cotton, K. S. Xu, R. Morey, and X. Wang. “Classification of PTSD and Non-PTSD Using Cortical Structural Measures in Machine Learning Analyses—Preliminary Study of ENIGMA-Psychiatric Genomics Consortium PTSD Workgroup.” In Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 12241 LNAI:118–27, 2020. https://doi.org/10.1007/978-3-030-59277-6_11.
O’Leary B, Shih CH, Chen T, Xie H, Cotton AS, Xu KS, et al. Classification of PTSD and Non-PTSD Using Cortical Structural Measures in Machine Learning Analyses—Preliminary Study of ENIGMA-Psychiatric Genomics Consortium PTSD Workgroup. In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2020. p. 118–27.
O’Leary, B., et al. “Classification of PTSD and Non-PTSD Using Cortical Structural Measures in Machine Learning Analyses—Preliminary Study of ENIGMA-Psychiatric Genomics Consortium PTSD Workgroup.” Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 12241 LNAI, 2020, pp. 118–27. Scopus, doi:10.1007/978-3-030-59277-6_11.
O’Leary B, Shih CH, Chen T, Xie H, Cotton AS, Xu KS, Morey R, Wang X. Classification of PTSD and Non-PTSD Using Cortical Structural Measures in Machine Learning Analyses—Preliminary Study of ENIGMA-Psychiatric Genomics Consortium PTSD Workgroup. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2020. p. 118–127.
Journal cover image

Published In

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

DOI

EISSN

1611-3349

ISSN

0302-9743

ISBN

9783030592769

Publication Date

January 1, 2020

Volume

12241 LNAI

Start / End Page

118 / 127

Related Subject Headings

  • Artificial Intelligence & Image Processing
  • 46 Information and computing sciences