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Variant Interpretation in Current Pharmacogenetic Testing.

Publication ,  Journal Article
Luvsantseren, S; Whirl-Carrillo, M; Sangkuhl, K; Shin, N; Wen, A; Empey, P; Alam, B; David, S; Dunnenberger, HM; Orlando, L; Altman, R; Palaniappan, L
Published in: J Pers Med
October 31, 2020

In the current marketplace, there are now more than a dozen commercial companies providing pharmacogenetic tests. Each company varies in the panel of genes they test and the variants they are able to screen for. The reports generated by these companies provide phenotypic interpretations of pharmacogenes and clinically actionable gene-drug interactions based on internally curated data and proprietary algorithms. The freedom to choose the types of evidence to include versus exclude in interpreting genomics has created reporting discrepancies in the industry. The case report presented here reveals the discordant phenotype analysis provided by two pharmacogenetic testing companies. The uncertainty and unnecessary distress experienced by the patient highlights the need for consensus in phenotype reporting within the industry.

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Published In

J Pers Med

DOI

ISSN

2075-4426

Publication Date

October 31, 2020

Volume

10

Issue

4

Location

Switzerland

Related Subject Headings

  • 3214 Pharmacology and pharmaceutical sciences
  • 3206 Medical biotechnology
  • 3205 Medical biochemistry and metabolomics
 

Citation

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Luvsantseren, S., Whirl-Carrillo, M., Sangkuhl, K., Shin, N., Wen, A., Empey, P., … Palaniappan, L. (2020). Variant Interpretation in Current Pharmacogenetic Testing. J Pers Med, 10(4). https://doi.org/10.3390/jpm10040204
Luvsantseren, Sally, Michelle Whirl-Carrillo, Katrin Sangkuhl, Nancy Shin, Alice Wen, Philip Empey, Benish Alam, et al. “Variant Interpretation in Current Pharmacogenetic Testing.J Pers Med 10, no. 4 (October 31, 2020). https://doi.org/10.3390/jpm10040204.
Luvsantseren S, Whirl-Carrillo M, Sangkuhl K, Shin N, Wen A, Empey P, et al. Variant Interpretation in Current Pharmacogenetic Testing. J Pers Med. 2020 Oct 31;10(4).
Luvsantseren, Sally, et al. “Variant Interpretation in Current Pharmacogenetic Testing.J Pers Med, vol. 10, no. 4, Oct. 2020. Pubmed, doi:10.3390/jpm10040204.
Luvsantseren S, Whirl-Carrillo M, Sangkuhl K, Shin N, Wen A, Empey P, Alam B, David S, Dunnenberger HM, Orlando L, Altman R, Palaniappan L. Variant Interpretation in Current Pharmacogenetic Testing. J Pers Med. 2020 Oct 31;10(4).

Published In

J Pers Med

DOI

ISSN

2075-4426

Publication Date

October 31, 2020

Volume

10

Issue

4

Location

Switzerland

Related Subject Headings

  • 3214 Pharmacology and pharmaceutical sciences
  • 3206 Medical biotechnology
  • 3205 Medical biochemistry and metabolomics