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Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae.

Publication ,  Journal Article
Chen, C; Gu, Y; Philippe, J; Zhang, P; Bachman, H; Zhang, J; Mai, J; Rufo, J; Rawls, JF; Davis, EE; Katsanis, N; Huang, TJ
Published in: Nat Commun
February 18, 2021

Modern biomedical research and preclinical pharmaceutical development rely heavily on the phenotyping of small vertebrate models for various diseases prior to human testing. In this article, we demonstrate an acoustofluidic rotational tweezing platform that enables contactless, high-speed, 3D multispectral imaging and digital reconstruction of zebrafish larvae for quantitative phenotypic analysis. The acoustic-induced polarized vortex streaming achieves contactless and rapid (~1 s/rotation) rotation of zebrafish larvae. This enables multispectral imaging of the zebrafish body and internal organs from different viewing perspectives. Moreover, we develop a 3D reconstruction pipeline that yields accurate 3D models based on the multi-view images for quantitative evaluation of basic morphological characteristics and advanced combinations of metrics. With its contactless nature and advantages in speed and automation, our acoustofluidic rotational tweezing system has the potential to be a valuable asset in numerous fields, especially for developmental biology, small molecule screening in biochemistry, and pre-clinical drug development in pharmacology.

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Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

February 18, 2021

Volume

12

Issue

1

Start / End Page

1118

Location

England

Related Subject Headings

  • Zebrafish
  • Transducers
  • Rotation
  • Phenotype
  • Organ Size
  • Liver
  • Larva
  • Imaging, Three-Dimensional
  • Ethanol
  • Animals
 

Citation

APA
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MLA
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Chen, C., Gu, Y., Philippe, J., Zhang, P., Bachman, H., Zhang, J., … Huang, T. J. (2021). Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae. Nat Commun, 12(1), 1118. https://doi.org/10.1038/s41467-021-21373-3
Chen, Chuyi, Yuyang Gu, Julien Philippe, Peiran Zhang, Hunter Bachman, Jinxin Zhang, John Mai, et al. “Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae.Nat Commun 12, no. 1 (February 18, 2021): 1118. https://doi.org/10.1038/s41467-021-21373-3.
Chen C, Gu Y, Philippe J, Zhang P, Bachman H, Zhang J, et al. Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae. Nat Commun. 2021 Feb 18;12(1):1118.
Chen, Chuyi, et al. “Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae.Nat Commun, vol. 12, no. 1, Feb. 2021, p. 1118. Pubmed, doi:10.1038/s41467-021-21373-3.
Chen C, Gu Y, Philippe J, Zhang P, Bachman H, Zhang J, Mai J, Rufo J, Rawls JF, Davis EE, Katsanis N, Huang TJ. Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae. Nat Commun. 2021 Feb 18;12(1):1118.

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

February 18, 2021

Volume

12

Issue

1

Start / End Page

1118

Location

England

Related Subject Headings

  • Zebrafish
  • Transducers
  • Rotation
  • Phenotype
  • Organ Size
  • Liver
  • Larva
  • Imaging, Three-Dimensional
  • Ethanol
  • Animals