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A novel method for comparative analysis of retinal specialization traits from topographic maps.

Publication ,  Journal Article
Moore, BA; Kamilar, JM; Collin, SP; Bininda-Emonds, ORP; Dominy, NJ; Hall, MI; Heesy, CP; Johnsen, S; Lisney, TJ; Loew, ER; Moritz, G ...
Published in: Journal of vision
November 2012

Vertebrates possess different types of retinal specializations that vary in number, size, shape, and position in the retina. This diversity in retinal configuration has been revealed through topographic maps, which show variations in neuron density across the retina. Although topographic maps of about 300 vertebrates are available, there is no method for characterizing retinal traits quantitatively. Our goal is to present a novel method to standardize information on the position of the retinal specializations and changes in retinal ganglion cell (RGC) density across the retina from published topographic maps. We measured the position of the retinal specialization using two Cartesian coordinates and the gradient in cell density by sampling ganglion cell density values along four axes (nasal, temporal, ventral, and dorsal). Using this information, along with the peak and lowest RGC densities, we conducted discriminant function analyses (DFAs) to establish if this method is sensitive to distinguish three common types of retinal specializations (fovea, area, and visual streak). The discrimination ability of the model was higher when considering terrestrial (78%-80% correct classification) and aquatic (77%-86% correct classification) species separately than together. Our method can be used in the future to test specific hypotheses on the differences in retinal morphology between retinal specializations and the association between retinal morphology and behavioral and ecological traits using comparative methods controlling for phylogenetic effects.

Duke Scholars

Published In

Journal of vision

DOI

EISSN

1534-7362

ISSN

1534-7362

Publication Date

November 2012

Volume

12

Issue

12

Start / End Page

13

Related Subject Headings

  • Vertebrates
  • Species Specificity
  • Retinal Horizontal Cells
  • Retinal Ganglion Cells
  • Retinal Bipolar Cells
  • Retina
  • Phylogeny
  • Photoreceptor Cells, Vertebrate
  • Humans
  • Fovea Centralis
 

Citation

APA
Chicago
ICMJE
MLA
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Moore, B. A., Kamilar, J. M., Collin, S. P., Bininda-Emonds, O. R. P., Dominy, N. J., Hall, M. I., … Fernández-Juricic, E. (2012). A novel method for comparative analysis of retinal specialization traits from topographic maps. Journal of Vision, 12(12), 13. https://doi.org/10.1167/12.12.13
Moore, Bret A., Jason M. Kamilar, Shaun P. Collin, Olaf R. P. Bininda-Emonds, Nathaniel J. Dominy, Margaret I. Hall, Christopher P. Heesy, et al. “A novel method for comparative analysis of retinal specialization traits from topographic maps.Journal of Vision 12, no. 12 (November 2012): 13. https://doi.org/10.1167/12.12.13.
Moore BA, Kamilar JM, Collin SP, Bininda-Emonds ORP, Dominy NJ, Hall MI, et al. A novel method for comparative analysis of retinal specialization traits from topographic maps. Journal of vision. 2012 Nov;12(12):13.
Moore, Bret A., et al. “A novel method for comparative analysis of retinal specialization traits from topographic maps.Journal of Vision, vol. 12, no. 12, Nov. 2012, p. 13. Epmc, doi:10.1167/12.12.13.
Moore BA, Kamilar JM, Collin SP, Bininda-Emonds ORP, Dominy NJ, Hall MI, Heesy CP, Johnsen S, Lisney TJ, Loew ER, Moritz G, Nava SS, Warrant E, Yopak KE, Fernández-Juricic E. A novel method for comparative analysis of retinal specialization traits from topographic maps. Journal of vision. 2012 Nov;12(12):13.

Published In

Journal of vision

DOI

EISSN

1534-7362

ISSN

1534-7362

Publication Date

November 2012

Volume

12

Issue

12

Start / End Page

13

Related Subject Headings

  • Vertebrates
  • Species Specificity
  • Retinal Horizontal Cells
  • Retinal Ganglion Cells
  • Retinal Bipolar Cells
  • Retina
  • Phylogeny
  • Photoreceptor Cells, Vertebrate
  • Humans
  • Fovea Centralis