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The effect of the organisms' body size and energy reserves in models for population dynamics

Publication ,  Journal Article
Kulminski, A; Manton, K; Akushevich, I; Yashin, A
Published in: Journal of Biological Systems
December 1, 2004

We present two models suitable for describing dynamics of a population of unicellular organisms residing in chemostat. These models are based on biologically motivated Dynamic Energy Budget (DEB) theory and take into account the dynamics of mean energy reserves and body length of organisms in the population. The difference between the models is in the construction of the reproduction rate. In model A it is the ordinary reproduction rate used in DEB theory. In model B it is adjusted to take into account a saturation effect in the dynamics of mean body length. Our modeling approach is illustrated by considering population of E. coli developing in the chemostat. We consider realistic situations of growth of population of E. coli at fixed and varied environmental and biological factors. We show that unlike model B in model A the dynamics of body length does not affect directly population development. Nevertheless, taking such dynamics into account is essential in both models since it provides additional constrains to population development. The models can be easily extended to include description of individual characteristics other than body size (e.g., reproduction rate, mortality rate). The models predict two types of transient dynamics: one type is similar to that in a logistic model; the other type is damped oscillations. The essential difference between the models is that model B better predicts the extinction threshold of the population.

Duke Scholars

Published In

Journal of Biological Systems

DOI

ISSN

0218-3390

Publication Date

December 1, 2004

Volume

12

Issue

4

Start / End Page

419 / 437

Related Subject Headings

  • Bioinformatics
  • 09 Engineering
  • 08 Information and Computing Sciences
  • 06 Biological Sciences
 

Citation

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Kulminski, A., Manton, K., Akushevich, I., & Yashin, A. (2004). The effect of the organisms' body size and energy reserves in models for population dynamics. Journal of Biological Systems, 12(4), 419–437. https://doi.org/10.1142/S0218339004001336
Kulminski, A., K. Manton, I. Akushevich, and A. Yashin. “The effect of the organisms' body size and energy reserves in models for population dynamics.” Journal of Biological Systems 12, no. 4 (December 1, 2004): 419–37. https://doi.org/10.1142/S0218339004001336.
Kulminski A, Manton K, Akushevich I, Yashin A. The effect of the organisms' body size and energy reserves in models for population dynamics. Journal of Biological Systems. 2004 Dec 1;12(4):419–37.
Kulminski, A., et al. “The effect of the organisms' body size and energy reserves in models for population dynamics.” Journal of Biological Systems, vol. 12, no. 4, Dec. 2004, pp. 419–37. Scopus, doi:10.1142/S0218339004001336.
Kulminski A, Manton K, Akushevich I, Yashin A. The effect of the organisms' body size and energy reserves in models for population dynamics. Journal of Biological Systems. 2004 Dec 1;12(4):419–437.
Journal cover image

Published In

Journal of Biological Systems

DOI

ISSN

0218-3390

Publication Date

December 1, 2004

Volume

12

Issue

4

Start / End Page

419 / 437

Related Subject Headings

  • Bioinformatics
  • 09 Engineering
  • 08 Information and Computing Sciences
  • 06 Biological Sciences