Skip to main content
Journal cover image

Probing soluble guanylate cyclase activation by CO and YC-1 using resonance Raman spectroscopy.

Publication ,  Journal Article
Ibrahim, M; Derbyshire, ER; Marletta, MA; Spiro, TG
Published in: Biochemistry
May 2010

Soluble guanylate cyclase (sGC) is weakly activated by carbon monoxide (CO) but is significantly activated by the binding of YC-1 to the sGC-CO complex. In this report, resonance Raman (RR) spectroscopy was used to study selected sGC variants. Addition of YC-1 to the sGC-CO complex alters the intensity pattern of RR bands assigned to the vinyl and propionate heme substituents, suggesting changes in the tilting of the pyrrole rings to which they are attached. YC-1 also shifts the RR intensity of the nu(FeC) and nu(CO) bands from 473 and 1985 cm(-1) to 487 and 1969 cm(-1), respectively, and induces an additional nu(FeC) band, at 521 cm(-1), assigned to five-coordinate heme-CO. Site-directed variants in the proximal heme pocket (P118A) or in the distal heme pocket (V5Y and I149Y) reduce the extent of YC-1 activation, along with the 473 cm(-1) band intensity. These lower-activity sGC variants display another nu(FeC) band at 493 cm(-1) which is insensitive to YC-1 addition and is attributed to protein that cannot be activated by the allosteric activator. The results are consistent with a model in which YC-1 binding to the sGC-CO complex results in a conformational change that activates the protein. Specifically, YC-1 binding alters the heme geometry via peripheral nonbonded contacts and also relieves an intrinsic electronic effect that weakens FeCO backbonding in the native, YC-1 responsive protein. This electronic effect might involve neutralization of the heme propionates via H-bond contacts or negative polarization by a distal cysteine residue. YC-1 binding also strains the Fe-histidine bond, leading to a population of the five-coordinate sGC-CO complex in addition to a conformationally distinct population of the six-coordinate sGC-CO complex. The loss of YC-1 activation in the sGC variants might involve a weakening of the heme-protein contacts that are thought to be critical to a YC-1-induced conformational change.

Duke Scholars

Published In

Biochemistry

DOI

EISSN

1520-4995

ISSN

0006-2960

Publication Date

May 2010

Volume

49

Issue

18

Start / End Page

3815 / 3823

Related Subject Headings

  • Spectrum Analysis, Raman
  • Soluble Guanylyl Cyclase
  • Receptors, Cytoplasmic and Nuclear
  • Rats
  • Protein Structure, Tertiary
  • Protein Binding
  • Kinetics
  • Indazoles
  • Heme
  • Guanylate Cyclase
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Ibrahim, M., Derbyshire, E. R., Marletta, M. A., & Spiro, T. G. (2010). Probing soluble guanylate cyclase activation by CO and YC-1 using resonance Raman spectroscopy. Biochemistry, 49(18), 3815–3823. https://doi.org/10.1021/bi902214j
Ibrahim, Mohammed, Emily R. Derbyshire, Michael A. Marletta, and Thomas G. Spiro. “Probing soluble guanylate cyclase activation by CO and YC-1 using resonance Raman spectroscopy.Biochemistry 49, no. 18 (May 2010): 3815–23. https://doi.org/10.1021/bi902214j.
Ibrahim M, Derbyshire ER, Marletta MA, Spiro TG. Probing soluble guanylate cyclase activation by CO and YC-1 using resonance Raman spectroscopy. Biochemistry. 2010 May;49(18):3815–23.
Ibrahim, Mohammed, et al. “Probing soluble guanylate cyclase activation by CO and YC-1 using resonance Raman spectroscopy.Biochemistry, vol. 49, no. 18, May 2010, pp. 3815–23. Epmc, doi:10.1021/bi902214j.
Ibrahim M, Derbyshire ER, Marletta MA, Spiro TG. Probing soluble guanylate cyclase activation by CO and YC-1 using resonance Raman spectroscopy. Biochemistry. 2010 May;49(18):3815–3823.
Journal cover image

Published In

Biochemistry

DOI

EISSN

1520-4995

ISSN

0006-2960

Publication Date

May 2010

Volume

49

Issue

18

Start / End Page

3815 / 3823

Related Subject Headings

  • Spectrum Analysis, Raman
  • Soluble Guanylyl Cyclase
  • Receptors, Cytoplasmic and Nuclear
  • Rats
  • Protein Structure, Tertiary
  • Protein Binding
  • Kinetics
  • Indazoles
  • Heme
  • Guanylate Cyclase