Scholars@Duke

• Background
• 

  Education, Training, & Certifications

  • Ph.D., University of North Carolina at Chapel Hill 1990
• 

  Duke Appointment History

  • Associate Research Professor in the Institute for Genome Sciences & Policy, Institutes and Centers, School of Medicine 2013 - 2014
  • Associate Research Professor in the Institute for Genome Sciences & Policy, Institutes and Centers, School of Medicine 2009 - 2013
• Research
• 

  Selected Grants

  • Developing Novel Medicines to Treat Dystonia awarded by Department of Defense 2019 - 2022
  • Postdoctoral Training in Genomic Medicine Research awarded by National Institutes of Health 2017 - 2022
  • Identification of Novel Bioactive Lipid Metabolites for Predicting Liver-related Outcomes in Persons Co-Infected with HIV and HCV awarded by National Institutes of Health 2017 - 2022
  • Control of COPII vesicle trafficking by intracellular protein glycosylation awarded by National Institutes of Health 2017 - 2021
  • Cell signaling through O-GlcNAc reader proteins awarded by National Institutes of Health 2016 - 2021
  • Novel tissue injury regulation at an organ-organ junction awarded by National Institutes of Health 2016 - 2021
  • UCB Biopharm SPRL 2019 - 2020
  • Role of Cell Adhesion and the Cytoskeleton in Epidermal Integrity awarded by National Institutes of Health 2015 - 2020
  • Proteomic Signatures of Space Radiation Induced Cardiovascular Degeneration 2016 - 2020
  • Qualification of Prognostic and Diagnostic Biomarkers of Knee Osteoarthritis awarded by National Institutes of Health 2017 - 2020
  • Metabolomic Signatures Predictive of Outcomes to Treatments for Major Depression awarded by National Institutes of Health 2016 - 2020
  • Enzymology of Chlamydial Pathogenesis awarded by National Institutes of Health 2013 - 2020
  • Abbott Diagnostics Collaborative Sponsored Research Agreement 2016 - 2019
  • Analysis of hybrid vigor 2018 - 2019
  • Thermo Lumos Tribrid High-Resolution Accurate-Mass Tandem Mass Spectrometer awarded by National Institutes of Health 2018 - 2019
  • Differentiation Induced Changes in Centrosomes and Microtubule Organization awarded by National Institutes of Health 2014 - 2019
  • Inhibition of Wnt/B-Catenin Signaling in Colorectal Cancer Therapy awarded by National Institutes of Health 2013 - 2019
  • Analysis of Hepatic Tissues using Tandem Mass Spectrometry and the Biocrates p180 Kit 2018
  • Quantitative Analysis of the Postsynaptic Inhibitory Complex In Vivo awarded by National Institutes of Health 2015 - 2017
  • Kinase Target of Diverse Cell Surface Receptors in Cancer Invasion and Metastasis awarded by National Institutes of Health 2011 - 2017
  • Aptamers as Proteomic Tools for Pancreatic Cancer Biomarker Identification awarded by National Institutes of Health 2015 - 2016
  • Instrumentation for Quantitative Phosphoproteomics and Acetylomics awarded by National Institutes of Health 2014 - 2015
  • Prevention of Temporal Lobe Epilepsy awarded by National Institutes of Health 2012 - 2014
  • Truncated GLI1 In Glioblastoma awarded by National Institutes of Health 2014
  • Proteomic Profiling of Human Heart Tissue Exposed to Microgravity 2012 - 2013
  • S-nitrosothiol-regulated pathways in acute lung injury awarded by National Institutes of Health 2010 - 2013
  • Molecular mechanisms of chemoresistance in breast cancer awarded by National Institutes of Health 2010 - 2012
  • The effects of Nlrp12 and IL-1b in inflammatory disorders awarded by National Institutes of Health 2010 - 2012
  • Mapping the Architecture of Cancer Signaling Pathways awarded by National Institutes of Health 2009 - 2012
  • Quantitative and Qualitative Differential Expression Proteomics awarded by National Institutes of Health 2010 - 2011
• 

  External Relationships

  • Thermo Fisher Scientific, Inc.
  • Waters Corporation
• Publications & Artistic Works
• 

  Selected Publications

  • Academic Articles

    • Ahmed, A. T., S. MahmoudianDehkordi, S. Bhattacharyya, M. Arnold, D. Liu, D. Neavin, M. A. Moseley, et al. “Acylcarnitine metabolomic profiles inform clinically-defined major depressive phenotypes.” Journal of Affective Disorders 264 (March 1, 2020): 90–97. https://doi.org/10.1016/j.jad.2019.11.122.
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    • Shwab, E Keats, Praveen R. Juvvadi, Greg Waitt, Erik J. Soderblom, Blake C. Barrington, Yohannes G. Asfaw, M Arthur Moseley, and William J. Steinbach. “Calcineurin-dependent dephosphorylation of the transcription factor CrzA at specific sites controls conidiation, stress tolerance, and virulence of Aspergillus fumigatus.” Mol Microbiol 112, no. 1 (July 2019): 62–80. https://doi.org/10.1111/mmi.14254.
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    • Naggie, Susanna, Meredith Clement, Sam Lusk, Anu Osinusi, Tiffany Himmel, Joseph E. Lucas, Will J. Thompson, et al. “Using Stepwise Pharmacogenomics and Proteomics to Predict Hepatitis C Treatment Response in Difficult to Treat Patient Populations.” Proteomics Clin Appl 13, no. 3 (May 2019): e1800006. https://doi.org/10.1002/prca.201800006.
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    • “Erratum to “Altered bile acid profile associates with cognitive impairment in Alzheimer’s disease—An emerging role for gut microbiome” [Alzheimer’s & Dementia 2019;15:76-92.].” Alzheimer’S & Dementia 15, no. 4 (April 2019): 604–604. https://doi.org/10.1016/j.jalz.2019.03.002.
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    • MahmoudianDehkordi, Siamak, Matthias Arnold, Kwangsik Nho, Shahzad Ahmad, Wei Jia, Guoxiang Xie, Gregory Louie, et al. “Altered bile acid profile associates with cognitive impairment in Alzheimer's disease-An emerging role for gut microbiome.” Alzheimers Dement 15, no. 1 (January 2019): 76–92. https://doi.org/10.1016/j.jalz.2018.07.217.
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    • Juvvadi, Praveen R., D Christopher Cole, Katie Falloon, Greg Waitt, Erik J. Soderblom, M Arthur Moseley, and William J. Steinbach. “Kin1 kinase localizes at the hyphal septum and is dephosphorylated by calcineurin but is dispensable for septation and virulence in the human pathogen Aspergillus fumigatus.” Biochem Biophys Res Commun 505, no. 3 (November 2, 2018): 740–46. https://doi.org/10.1016/j.bbrc.2018.09.186.
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    • Kelliher, Christina M., Matthew W. Foster, Francis C. Motta, Anastasia Deckard, Erik J. Soderblom, M Arthur Moseley, and Steven B. Haase. “Layers of regulation of cell-cycle gene expression in the budding yeast Saccharomyces cerevisiae.” Mol Biol Cell 29, no. 22 (November 1, 2018): 2644–55. https://doi.org/10.1091/mbc.E18-04-0255.
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    • Hardison, Rachael L., Derek R. Heimlich, Alistair Harrison, Wandy L. Beatty, Sarah Rains, M Arthur Moseley, J Will Thompson, Sheryl S. Justice, and Kevin M. Mason. “Erratum for Hardison et al., "Transient Nutrient Deprivation Promotes Macropinocytosis-Dependent Intracellular Bacterial Community Development".” Msphere 3, no. 5 (October 31, 2018). https://doi.org/10.1128/mSphere.00562-18.
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    • Hardison, Rachael L., Derek R. Heimlich, Alistair Harrison, Wandy L. Beatty, Sarah Rains, M Arthur Moseley, J Will Thompson, Sheryl S. Justice, and Kevin M. Mason. “Transient Nutrient Deprivation Promotes Macropinocytosis-Dependent Intracellular Bacterial Community Development.” Msphere 3, no. 5 (September 12, 2018). https://doi.org/10.1128/mSphere.00286-18.
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    • Renshaw, Hilary, José M. Vargas-Muñiz, Praveen R. Juvvadi, Amber D. Richards, Greg Waitt, Erik J. Soderblom, M Arthur Moseley, and William J. Steinbach. “The tail domain of the Aspergillus fumigatus class V myosin MyoE orchestrates septal localization and hyphal growth.” J Cell Sci 131, no. 3 (February 7, 2018). https://doi.org/10.1242/jcs.205955.
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    • Juvvadi, Praveen R., M Arthur Moseley, Christopher J. Hughes, Erik J. Soderblom, Sarah Lennon, Simon R. Perkins, J Will Thompson, et al. “Scanning Quadrupole Data-Independent Acquisition, Part B: Application to the Analysis of the Calcineurin-Interacting Proteins during Treatment of Aspergillus fumigatus with Azole and Echinocandin Antifungal Drugs.” J Proteome Res 17, no. 2 (February 2, 2018): 780–93. https://doi.org/10.1021/acs.jproteome.7b00499.
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    • Moseley, M Arthur, Christopher J. Hughes, Praveen R. Juvvadi, Erik J. Soderblom, Sarah Lennon, Simon R. Perkins, J Will Thompson, et al. “Scanning Quadrupole Data-Independent Acquisition, Part A: Qualitative and Quantitative Characterization.” J Proteome Res 17, no. 2 (February 2, 2018): 770–79. https://doi.org/10.1021/acs.jproteome.7b00464.
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    • Bowden, John A., Alan Heckert, Candice Z. Ulmer, Christina M. Jones, Jeremy P. Koelmel, Laila Abdullah, Linda Ahonen, et al. “Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma.” J Lipid Res 58, no. 12 (December 2017): 2275–88. https://doi.org/10.1194/jlr.M079012.
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    • Shwab, Elliot K., Praveen R. Juvvadi, Greg Waitt, Erik J. Soderblom, Martin A. Moseley, Nathan I. Nicely, and William J. Steinbach. “Phosphorylation of Aspergillus fumigatus PkaR impacts growth and cell wall integrity through novel mechanisms.” Febs Lett 591, no. 22 (November 2017): 3730–44. https://doi.org/10.1002/1873-3468.12886.
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    • St John-Williams, Lisa, Colette Blach, Jon B. Toledo, Daniel M. Rotroff, Sungeun Kim, Kristaps Klavins, Rebecca Baillie, et al. “Targeted metabolomics and medication classification data from participants in the ADNI1 cohort.” Sci Data 4 (October 17, 2017): 170140. https://doi.org/10.1038/sdata.2017.140.
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    • Banks, Courtney J., Nathan W. Rodriguez, Kyle R. Gashler, Rushika R. Pandya, Jeffrey B. Mortenson, Matthew D. Whited, Erik J. Soderblom, et al. “Acylation of Superoxide Dismutase 1 (SOD1) at K122 Governs SOD1-Mediated Inhibition of Mitochondrial Respiration.” Mol Cell Biol 37, no. 20 (October 15, 2017). https://doi.org/10.1128/MCB.00354-17.
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    • Toledo, Jon B., Matthias Arnold, Gabi Kastenmüller, Rui Chang, Rebecca A. Baillie, Xianlin Han, Madhav Thambisetty, et al. “Metabolic network failures in Alzheimer's disease: A biochemical road map.” Alzheimers Dement 13, no. 9 (September 2017): 965–84. https://doi.org/10.1016/j.jalz.2017.01.020.
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    • Wang, Honghui, Steven K. Drake, Chen Yong, Marjan Gucek, Matthew A. Lyes, Avi Z. Rosenberg, Erik Soderblom, M. Arthur Moseley, John P. Dekker, and Anthony F. Suffredini. “A Genoproteomic Approach to Detect Peptide Markers of Bacterial Respiratory Pathogens.” Clin Chem 63, no. 8 (August 2017): 1398–1408. https://doi.org/10.1373/clinchem.2016.269647.
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    • Foster, Matthew W., Zhonghui Yang, David M. Gooden, J Will Thompson, Carol H. Ball, Meredith E. Turner, Yongyong Hou, Jingbo Pi, M Arthur Moseley, and Loretta G. Que. “Correction to "Proteomic Characterization of the Cellular Response to Nitrosative Stress Mediated by S-Nitrosoglutathione Reductase Inhibition".” J Proteome Res 16, no. 7 (July 7, 2017): 2661. https://doi.org/10.1021/acs.jproteome.7b00368.
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    • Brass, David M., William M. Gwinn, Ashlee M. Valente, Francine L. Kelly, Christie D. Brinkley, Andrew E. Nagler, M Arthur Moseley, Daniel L. Morgan, Scott M. Palmer, and Matthew W. Foster. “The Diacetyl-Exposed Human Airway Epithelial Secretome: New Insights into Flavoring-Induced Airways Disease.” Am J Respir Cell Mol Biol 56, no. 6 (June 2017): 784–95. https://doi.org/10.1165/rcmb.2016-0372OC.
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    • Tu, Tian Ming, Brad J. Kolls, Erik J. Soderblom, Viviana Cantillana, Paul Durham Ferrell, M Arthur Moseley, Haichen Wang, Hana N. Dawson, and Daniel T. Laskowitz. “Apolipoprotein E mimetic peptide, CN-105, improves outcomes in ischemic stroke.” Ann Clin Transl Neurol 4, no. 4 (April 2017): 246–65. https://doi.org/10.1002/acn3.399.
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    • Vargas-Muñiz, José M., Hilary Renshaw, Greg Waitt, Erik J. Soderblom, M Arthur Moseley, Jonathan M. Palmer, Praveen R. Juvvadi, Nancy P. Keller, and William J. Steinbach. “Caspofungin exposure alters the core septin AspB interactome of Aspergillus fumigatus.” Biochem Biophys Res Commun 485, no. 2 (April 1, 2017): 221–26. https://doi.org/10.1016/j.bbrc.2017.02.116.
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    • Burke, Thomas W., Ricardo Henao, Erik Soderblom, Ephraim L. Tsalik, J Will Thompson, Micah T. McClain, Marshall Nichols, et al. “Nasopharyngeal Protein Biomarkers of Acute Respiratory Virus Infection.” Ebiomedicine 17 (March 2017): 172–81. https://doi.org/10.1016/j.ebiom.2017.02.015.
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    • Wang, Liuyang, Emily R. Ko, James J. Gilchrist, Kelly J. Pittman, Anna Rautanen, Matti Pirinen, J Will Thompson, et al. “Human genetic and metabolite variation reveals that methylthioadenosine is a prognostic biomarker and an inflammatory regulator in sepsis.” Sci Adv 3, no. 3 (March 2017): e1602096. https://doi.org/10.1126/sciadv.1602096.
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    • Shwab, E Keats, Praveen R. Juvvadi, Greg Waitt, Erik J. Soderblom, M Arthur Moseley, Nathan I. Nicely, Yohannes G. Asfaw, and William J. Steinbach. “A Novel Phosphoregulatory Switch Controls the Activity and Function of the Major Catalytic Subunit of Protein Kinase A in Aspergillus fumigatus.” Mbio 8, no. 1 (February 7, 2017). https://doi.org/10.1128/mBio.02319-16.
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    • Foster, Matthew W., William M. Gwinn, Francine L. Kelly, David M. Brass, Ashlee M. Valente, M Arthur Moseley, J Will Thompson, Daniel L. Morgan, and Scott M. Palmer. “Proteomic Analysis of Primary Human Airway Epithelial Cells Exposed to the Respiratory Toxicant Diacetyl.” J Proteome Res 16, no. 2 (February 3, 2017): 538–49. https://doi.org/10.1021/acs.jproteome.6b00672.
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    • Alexander, Georgia M., Yang Zhong Huang, Erik J. Soderblom, Xiao-Ping He, M Arthur Moseley, and James O. McNamara. “Vagal nerve stimulation modifies neuronal activity and the proteome of excitatory synapses of amygdala/piriform cortex.” J Neurochem 140, no. 4 (February 2017): 629–44. https://doi.org/10.1111/jnc.13931.
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    • Peterson, Christine Tara, Joseph Lucas, Lisa St John-Williams, J Will Thompson, M Arthur Moseley, Sheila Patel, Scott N. Peterson, et al. “Corrigendum: Identification of Altered Metabolomic Profiles Following a Panchakarma-based Ayurvedic Intervention in Healthy Subjects: The Self-Directed Biological Transformation Initiative (SBTI).” Sci Rep 6 (October 10, 2016): 34678. https://doi.org/10.1038/srep34678.
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    • Feger, Bryan J., J Will Thompson, Laura G. Dubois, Reddy P. Kommaddi, Matthew W. Foster, Rajashree Mishra, Sudha K. Shenoy, et al. “Microgravity induces proteomics changes involved in endoplasmic reticulum stress and mitochondrial protection.” Sci Rep 6 (September 27, 2016): 34091. https://doi.org/10.1038/srep34091.
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    • Peterson, Christine Tara, Joseph Lucas, Lisa St John-Williams, J Will Thompson, M Arthur Moseley, Sheila Patel, Scott N. Peterson, et al. “Identification of Altered Metabolomic Profiles Following a Panchakarma-based Ayurvedic Intervention in Healthy Subjects: The Self-Directed Biological Transformation Initiative (SBTI).” Sci Rep 6 (September 9, 2016): 32609. https://doi.org/10.1038/srep32609.
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    • Park, Hee-Soo, Eve W. L. Chow, Ci Fu, Erik J. Soderblom, M Arthur Moseley, Joseph Heitman, and Maria E. Cardenas. “Calcineurin Targets Involved in Stress Survival and Fungal Virulence.” Plos Pathog 12, no. 9 (September 2016): e1005873. https://doi.org/10.1371/journal.ppat.1005873.
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    • Quinones, Quintin J., Zhiquan Zhang, Qing Ma, Michael P. Smith, Erik Soderblom, M Arthur Moseley, James Bain, et al. “Proteomic Profiling Reveals Adaptive Responses to Surgical Myocardial Ischemia-Reperfusion in Hibernating Arctic Ground Squirrels Compared to Rats.” Anesthesiology 124, no. 6 (June 2016): 1296–1310. https://doi.org/10.1097/ALN.0000000000001113.
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    • Harrison, Alistair, Laura G. Dubois, Lisa St John-Williams, M Arthur Moseley, Rachael L. Hardison, Derek R. Heimlich, Alexander Stoddard, et al. “Comprehensive Proteomic and Metabolomic Signatures of Nontypeable Haemophilus influenzae-Induced Acute Otitis Media Reveal Bacterial Aerobic Respiration in an Immunosuppressed Environment.” Mol Cell Proteomics 15, no. 3 (March 2016): 1117–38. https://doi.org/10.1074/mcp.M115.052498.
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    • Vargas-Muñiz, José M., Hilary Renshaw, Amber D. Richards, Greg Waitt, Erik J. Soderblom, Martin A. Moseley, Yohannes Asfaw, Praveen R. Juvvadi, and William J. Steinbach. “Dephosphorylation of the Core Septin, AspB, in a Protein Phosphatase 2A-Dependent Manner Impacts Its Localization and Function in the Fungal Pathogen Aspergillus fumigatus.” Front Microbiol 7 (2016): 997. https://doi.org/10.3389/fmicb.2016.00997.
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    • Barrientos, Tomasa, Indira Laothamatas, Timothy R. Koves, Erik J. Soderblom, Miles Bryan, M Arthur Moseley, Deborah M. Muoio, and Nancy C. Andrews. “Metabolic Catastrophe in Mice Lacking Transferrin Receptor in Muscle.” Ebiomedicine 2, no. 11 (November 2015): 1705–17. https://doi.org/10.1016/j.ebiom.2015.09.041.
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    • Figueiredo-Freitas, Cícero, Raul A. Dulce, Matthew W. Foster, Jingsheng Liang, Aline M. S. Yamashita, Frederico L. Lima-Rosa, J Will Thompson, et al. “S-Nitrosylation of Sarcomeric Proteins Depresses Myofilament Ca2+)Sensitivity in Intact Cardiomyocytes.” Antioxid Redox Signal 23, no. 13 (November 1, 2015): 1017–34. https://doi.org/10.1089/ars.2015.6275.
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    • Foster, Matthew W., Geoff Gerhardt, Lynda Robitaille, Pier-Luc Plante, Guy Boivin, Jacques Corbeil, and M Arthur Moseley. “Targeted Proteomics of Human Metapneumovirus in Clinical Samples and Viral Cultures.” Anal Chem 87, no. 20 (October 20, 2015): 10247–54. https://doi.org/10.1021/acs.analchem.5b01544.
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    • Vermulst, M., A. S. Denney, M. J. Lang, C. W. Hung, S. Moore, M. A. Moseley, J. W. Thompson, et al. “Erratum: Transcription errors induce proteotoxic stress and shorten cellular lifespan (Nature Communications (2015) 6:8065 DOI: 10.1038/ncomms9065).” Nature Communications 6 (October 14, 2015). https://doi.org/10.1038/ncomms9738.
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    • Vermulst, Marc, Ashley S. Denney, Michael J. Lang, Chao-Wei Hung, Stephanie Moore, M Arthur Moseley, J Will Thompson, et al. “Transcription errors induce proteotoxic stress and shorten cellular lifespan.” Nat Commun 6 (August 25, 2015): 8065. https://doi.org/10.1038/ncomms9065.
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    • Juvvadi, Praveen R., Alberto Muñoz, Frédéric Lamoth, Erik J. Soderblom, M Arthur Moseley, Nick D. Read, and William J. Steinbach. “Calcium-Mediated Induction of Paradoxical Growth following Caspofungin Treatment Is Associated with Calcineurin Activation and Phosphorylation in Aspergillus fumigatus.” Antimicrob Agents Chemother 59, no. 8 (August 2015): 4946–55. https://doi.org/10.1128/AAC.00263-15.
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    • Lamoth, Frédéric, Praveen R. Juvvadi, Erik J. Soderblom, M Arthur Moseley, and William J. Steinbach. “Hsp70 and the Cochaperone StiA (Hop) Orchestrate Hsp90-Mediated Caspofungin Tolerance in Aspergillus fumigatus.” Antimicrob Agents Chemother 59, no. 8 (August 2015): 4727–33. https://doi.org/10.1128/AAC.00946-15.
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    • Vargas-Muñiz, José M., Hilary Renshaw, Amber D. Richards, Frédéric Lamoth, Erik J. Soderblom, M Arthur Moseley, Praveen R. Juvvadi, and William J. Steinbach. “The Aspergillus fumigatus septins play pleiotropic roles in septation, conidiation, and cell wall stress, but are dispensable for virulence.” Fungal Genet Biol 81 (August 2015): 41–51. https://doi.org/10.1016/j.fgb.2015.05.014.
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    • Bauernfeind, Amy L., Erik J. Soderblom, Meredith E. Turner, M Arthur Moseley, John J. Ely, Patrick R. Hof, Chet C. Sherwood, Gregory A. Wray, and Courtney C. Babbitt. “Evolutionary Divergence of Gene and Protein Expression in the Brains of Humans and Chimpanzees.” Genome Biol Evol 7, no. 8 (July 10, 2015): 2276–88. https://doi.org/10.1093/gbe/evv132.
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    • Yung, Cheuk-Man, Marissa K. Vereen, Amy Herbert, Katherine M. Davis, Jiayu Yang, Agata Kantorowska, Christopher S. Ward, Jennifer J. Wernegreen, Zackary I. Johnson, and Dana E. Hunt. “Thermally adaptive tradeoffs in closely related marine bacterial strains.” Environ Microbiol 17, no. 7 (July 2015): 2421–29. https://doi.org/10.1111/1462-2920.12714.
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    • Foster, Matthew W., Lake D. Morrison, Jamie L. Todd, Laurie D. Snyder, J Will Thompson, Erik J. Soderblom, Kelly Plonk, et al. “Quantitative proteomics of bronchoalveolar lavage fluid in idiopathic pulmonary fibrosis.” J Proteome Res 14, no. 2 (February 6, 2015): 1238–49. https://doi.org/10.1021/pr501149m.
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    • Paglia, Giuseppe, Peggi Angel, Jonathan P. Williams, Keith Richardson, Hernando J. Olivos, J Will Thompson, Lochana Menikarachchi, et al. “Ion mobility-derived collision cross section as an additional measure for lipid fingerprinting and identification.” Anal Chem 87, no. 2 (January 20, 2015): 1137–44. https://doi.org/10.1021/ac503715v.
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    • Juvvadi, Praveen R., Yan Ma, Amber D. Richards, Erik J. Soderblom, M Arthur Moseley, Frédéric Lamoth, and William J. Steinbach. “Identification and mutational analyses of phosphorylation sites of the calcineurin-binding protein CbpA and the identification of domains required for calcineurin binding in Aspergillus fumigatus.” Front Microbiol 6 (2015): 175. https://doi.org/10.3389/fmicb.2015.00175.
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    • Saka, Hector Alex, J Will Thompson, Yi-Shan Chen, Laura G. Dubois, Joel T. Haas, Arthur Moseley, and Raphael H. Valdivia. “Chlamydia trachomatis Infection Leads to Defined Alterations to the Lipid Droplet Proteome in Epithelial Cells.” Plos One 10, no. 4 (2015): e0124630. https://doi.org/10.1371/journal.pone.0124630.
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    • Pfenning, Andreas R., Erina Hara, Osceola Whitney, Miriam V. Rivas, Rui Wang, Petra L. Roulhac, Jason T. Howard, et al. “Convergent transcriptional specializations in the brains of humans and song-learning birds.” Science 346, no. 6215 (December 12, 2014): 1256846. https://doi.org/10.1126/science.1256846.
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    • Mehta, K., E. J. Soderblom, J. W. Thompson, L. G. Que, H. E. Marshall, M. A. Moseley, and M. W. Foster. “Targeted proteomics for unraveling the post-translational regulation of human nitric oxide synthase 2.” Nitric Oxide 42C (November 15, 2014): 132. https://doi.org/10.1016/j.niox.2014.09.100.
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    • Olson, Andrew L., Ashley T. Tucker, Benjamin G. Bobay, Erik J. Soderblom, M Arthur Moseley, Richele J. Thompson, and John Cavanagh. “Structure and DNA-binding traits of the transition state regulator AbrB.” Structure 22, no. 11 (November 4, 2014): 1650–56. https://doi.org/10.1016/j.str.2014.08.018.
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    • Jagannathan, Sujatha, Jack C-C Hsu, David W. Reid, Qiang Chen, Will J. Thompson, Arthur M. Moseley, and Christopher V. Nicchitta. “Multifunctional roles for the protein translocation machinery in RNA anchoring to the endoplasmic reticulum.” J Biol Chem 289, no. 37 (September 12, 2014): 25907–24. https://doi.org/10.1074/jbc.M114.580688.
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    • Foster, Matthew W., J Will Thompson, Julie G. Ledford, Laura G. Dubois, John W. Hollingsworth, Dave Francisco, Sasipa Tanyaratsrisakul, et al. “Identification and Quantitation of Coding Variants and Isoforms of Pulmonary Surfactant Protein A.” J Proteome Res 13, no. 8 (August 1, 2014): 3722–32. https://doi.org/10.1021/pr500307f.
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    • Tucker, Ashley T., Benjamin G. Bobay, Allison V. Banse, Andrew L. Olson, Erik J. Soderblom, M Arthur Moseley, Richele J. Thompson, Kristen M. Varney, Richard Losick, and John Cavanagh. “A DNA mimic: the structure and mechanism of action for the anti-repressor protein AbbA.” J Mol Biol 426, no. 9 (May 1, 2014): 1911–24. https://doi.org/10.1016/j.jmb.2014.02.010.
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    • Paglia, Giuseppe, Jonathan P. Williams, Lochana Menikarachchi, J Will Thompson, Richard Tyldesley-Worster, Skarphédinn Halldórsson, Ottar Rolfsson, et al. “Ion mobility derived collision cross sections to support metabolomics applications.” Anal Chem 86, no. 8 (April 15, 2014): 3985–93. https://doi.org/10.1021/ac500405x.
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    • Yang, Wei, Huaxin Sheng, J Will Thompson, Shengli Zhao, Liangli Wang, Pei Miao, Xiaozhi Liu, M Arthur Moseley, and Wulf Paschen. “Small ubiquitin-like modifier 3-modified proteome regulated by brain ischemia in novel small ubiquitin-like modifier transgenic mice: putative protective proteins/pathways.” Stroke 45, no. 4 (April 2014): 1115–22. https://doi.org/10.1161/STROKEAHA.113.004315.
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    • Iwabuchi, Masahiro, Huaxin Sheng, J Will Thompson, Liangli Wang, Laura G. Dubois, David Gooden, Marthur Moseley, Wulf Paschen, and Wei Yang. “Characterization of the ubiquitin-modified proteome regulated by transient forebrain ischemia.” J Cereb Blood Flow Metab 34, no. 3 (March 2014): 425–32. https://doi.org/10.1038/jcbfm.2013.210.
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    • Lamoth, Frédéric, Praveen R. Juvvadi, Erik J. Soderblom, M Arthur Moseley, Yohannes G. Asfaw, and William J. Steinbach. “Identification of a key lysine residue in heat shock protein 90 required for azole and echinocandin resistance in Aspergillus fumigatus.” Antimicrob Agents Chemother 58, no. 4 (2014): 1889–96. https://doi.org/10.1128/AAC.02286-13.
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    • Little, Dianne, J Will Thompson, Laura G. Dubois, David S. Ruch, M Arthur Moseley, and Farshid Guilak. “Proteomic differences between male and female anterior cruciate ligament and patellar tendon.” Plos One 9, no. 5 (2014): e96526. https://doi.org/10.1371/journal.pone.0096526.
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    • Schechter, Matthew A., Michael K. H. Hsieh, Linda W. Njoroge, J Will Thompson, Erik J. Soderblom, Bryan J. Feger, Constantine D. Troupes, et al. “Phosphoproteomic profiling of human myocardial tissues distinguishes ischemic from non-ischemic end stage heart failure.” Plos One 9, no. 8 (2014): e104157. https://doi.org/10.1371/journal.pone.0104157.
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    • Benjamin, Ashlee M., J Will Thompson, Erik J. Soderblom, Scott J. Geromanos, Ricardo Henao, Virginia B. Kraus, M Arthur Moseley, and Joseph E. Lucas. “A flexible statistical model for alignment of label-free proteomics data--incorporating ion mobility and product ion information.” Bmc Bioinformatics 14 (December 16, 2013): 364. https://doi.org/10.1186/1471-2105-14-364.
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    • Fouda, Genevieve G., Frederick H. Jaeger, Joshua D. Amos, Carrie Ho, Erika L. Kunz, Kara Anasti, Lisa W. Stamper, et al. “Tenascin-C is an innate broad-spectrum, HIV-1-neutralizing protein in breast milk.” Proc Natl Acad Sci U S A 110, no. 45 (November 5, 2013): 18220–25. https://doi.org/10.1073/pnas.1307336110.
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    • Foster, Matthew W., J Will Thompson, Michael T. Forrester, Yonggang Sha, Timothy J. McMahon, Dawn E. Bowles, M Arthur Moseley, and Harvey E. Marshall. “Proteomic analysis of the NOS2 interactome in human airway epithelial cells.” Nitric Oxide 34 (November 1, 2013): 37–46. https://doi.org/10.1016/j.niox.2013.02.079.
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    • Hoos, Michael D., Brenna M. Richardson, Matthew W. Foster, Angela Everhart, J Will Thompson, M Arthur Moseley, and Carol A. Colton. “Longitudinal study of differential protein expression in an Alzheimer's mouse model lacking inducible nitric oxide synthase.” J Proteome Res 12, no. 10 (October 4, 2013): 4462–77. https://doi.org/10.1021/pr4005103.
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    • Thompson, J Will, Michael T. Forrester, M Arthur Moseley, and Matthew W. Foster. “Solid-phase capture for the detection and relative quantification of S-nitrosoproteins by mass spectrometry.” Methods 62, no. 2 (August 1, 2013): 130–37. https://doi.org/10.1016/j.ymeth.2012.10.001.
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    • Langley, Raymond J., Ephraim L. Tsalik, Jennifer C. van Velkinburgh, Seth W. Glickman, Brandon J. Rice, Chunping Wang, Bo Chen, et al. “An integrated clinico-metabolomic model improves prediction of death in sepsis.” Sci Transl Med 5, no. 195 (July 24, 2013): 195ra95. https://doi.org/10.1126/scitranslmed.3005893.
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    • Henao, R., J. W. Thompson, M. A. Moseley, G. S. Ginsburg, L. Carin, and J. E. Lucas. “Latent protein trees.” Annals of Applied Statistics 7, no. 2 (June 1, 2013): 691–713. https://doi.org/10.1214/13-AOAS639.
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    • Foster, Matthew W., J Will Thompson, Loretta G. Que, Ivana V. Yang, David A. Schwartz, M Arthur Moseley, and Harvey E. Marshall. “Proteomic analysis of human bronchoalveolar lavage fluid after subsgemental exposure.” J Proteome Res 12, no. 5 (May 3, 2013): 2194–2205. https://doi.org/10.1021/pr400066g.
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    • Richardson, Brenna McJury, Erik J. Soderblom, J Will Thompson, and M Arthur Moseley. “Automated, reproducible, titania-based phosphopeptide enrichment strategy for label-free quantitative phosphoproteomics.” J Biomol Tech 24, no. 1 (April 2013): 8–16. https://doi.org/10.7171/jbt.13-2401-002.
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    • Juvvadi, Praveen Rao, Detti Belina, Erik J. Soderblom, M Arthur Moseley, and William J. Steinbach. “Filamentous fungal-specific septin AspE is phosphorylated in vivo and interacts with actin, tubulin and other septins in the human pathogen Aspergillus fumigatus.” Biochem Biophys Res Commun 431, no. 3 (February 15, 2013): 547–53. https://doi.org/10.1016/j.bbrc.2013.01.020.
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    • Kummarapurugu, Apparao B., Bernard M. Fischer, Shuo Zheng, Ginger L. Milne, Andrew J. Ghio, Erin N. Potts-Kant, W Michael Foster, et al. “NADPH:quinone oxidoreductase 1 regulates host susceptibility to ozone via isoprostane generation.” J Biol Chem 288, no. 7 (February 15, 2013): 4681–91. https://doi.org/10.1074/jbc.M112.438440.
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    • Fan, Yongliang, J Will Thompson, Laura G. Dubois, M Arthur Moseley, and Jennifer J. Wernegreen. “Proteomic analysis of an unculturable bacterial endosymbiont (Blochmannia) reveals high abundance of chaperonins and biosynthetic enzymes.” J Proteome Res 12, no. 2 (February 1, 2013): 704–18. https://doi.org/10.1021/pr3007842.
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    • Ralston-Hooper, K. J., M. E. Turner, E. J. Soderblom, D. Villeneuve, G. T. Ankley, M. A. Moseley, R. A. Hoke, and P. L. Ferguson. “Application of a label-free, gel-free quantitative proteomics method for ecotoxicological studies of small fish species.” Environ Sci Technol 47, no. 2 (January 15, 2013): 1091–1100. https://doi.org/10.1021/es303170u.
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    • Soderblom, Erik J., J Will Thompson, Evan A. Schwartz, Edward Chiou, Laura G. Dubois, M Arthur Moseley, and Rahima Zennadi. “Proteomic analysis of ERK1/2-mediated human sickle red blood cell membrane protein phosphorylation.” Clin Proteomics 10, no. 1 (January 3, 2013): 1. https://doi.org/10.1186/1559-0275-10-1.
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    • Foster, M. W., J. W. Thompson, L. G. Que, I. V. Yang, D. A. Schwartz, M. A. Moseley, and H. E. Marshall. “Proteomic Analysis Of Human Bronchoalveolar Lavage Fluid After Subsegmental Challenge.” American Journal of Respiratory and Critical Care Medicine 187 (2013).
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    • Juvvadi, Praveen R., Christopher Gehrke, Jarrod R. Fortwendel, Frédéric Lamoth, Erik J. Soderblom, Erik C. Cook, Michael A. Hast, et al. “Phosphorylation of Calcineurin at a novel serine-proline rich region orchestrates hyphal growth and virulence in Aspergillus fumigatus.” Plos Pathog 9, no. 8 (2013): e1003564. https://doi.org/10.1371/journal.ppat.1003564.
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    • Chan, Mark Y., Min Lin, Joseph Lucas, Arthur Moseley, J Will Thompson, Derek Cyr, Hitoshi Ueda, Mariko Kajikawa, Thomas L. Ortel, and Richard C. Becker. “Plasma proteomics of patients with non-valvular atrial fibrillation on chronic anti-coagulation with warfarin or a direct factor Xa inhibitor.” Thromb Haemost 108, no. 6 (December 2012): 1180–91. https://doi.org/10.1160/TH12-05-0310.
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    • Thompson, J Will, Haoyue Zhang, Peter Smith, Steven Hillman, M Arthur Moseley, and David S. Millington. “Extraction and analysis of carnitine and acylcarnitines by electrospray ionization tandem mass spectrometry directly from dried blood and plasma spots using a novel autosampler.” Rapid Commun Mass Spectrom 26, no. 21 (November 15, 2012): 2548–54. https://doi.org/10.1002/rcm.6370.
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    • Thalassinos, Konstantinos, Johannes P. C. Vissers, Stefan Tenzer, Yishai Levin, J Will Thompson, David Daniel, Darrin Mann, et al. “Design and application of a data-independent precursor and product ion repository.” J Am Soc Mass Spectrom 23, no. 10 (October 2012): 1808–20. https://doi.org/10.1007/s13361-012-0416-9.
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    • Schumacher, Maria A., JungKi Min, Todd M. Link, Ziqiang Guan, Weijun Xu, Young-Ho Ahn, Erik J. Soderblom, et al. “Role of unusual P loop ejection and autophosphorylation in HipA-mediated persistence and multidrug tolerance.” Cell Rep 2, no. 3 (September 27, 2012): 518–25. https://doi.org/10.1016/j.celrep.2012.08.013.
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    • Gu, Jing Jin, Catherine P. Lavau, Elena Pugacheva, Erik J. Soderblom, M Arthur Moseley, and Ann Marie Pendergast. “Abl family kinases modulate T cell-mediated inflammation and chemokine-induced migration through the adaptor HEF1 and the GTPase Rap1.” Sci Signal 5, no. 233 (July 17, 2012): ra51. https://doi.org/10.1126/scisignal.2002632.
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    • Henao, R., J. W. Thompson, M. A. Moseley, G. S. Ginsburg, L. Carin, and J. E. Lucas. “Hierarchical factor modeling of proteomics data.” 2012 Ieee 2nd International Conference on Computational Advances in Bio and Medical Sciences, Iccabs 2012, May 8, 2012. https://doi.org/10.1109/ICCABS.2012.6182638.
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    • Lucas, Joseph E., J Will Thompson, Laura G. Dubois, Jeanette McCarthy, Hans Tillmann, Alexander Thompson, Norah Shire, et al. “Metaprotein expression modeling for label-free quantitative proteomics.” Bmc Bioinformatics 13 (May 4, 2012): 74. https://doi.org/10.1186/1471-2105-13-74.
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    • Petricka, Jalean J., Monica A. Schauer, Molly Megraw, Natalie W. Breakfield, J Will Thompson, Stoyan Georgiev, Erik J. Soderblom, et al. “The protein expression landscape of the Arabidopsis root.” Proc Natl Acad Sci U S A 109, no. 18 (May 1, 2012): 6811–18. https://doi.org/10.1073/pnas.1202546109.
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    • Qian, Jin, Feng Chen, Yevgeniy Kovalenkov, Deepesh Pandey, M Arthur Moseley, Matthew W. Foster, Stephen M. Black, Richard C. Venema, David W. Stepp, and David J. R. Fulton. “Nitric oxide reduces NADPH oxidase 5 (Nox5) activity by reversible S-nitrosylation.” Free Radic Biol Med 52, no. 9 (May 1, 2012): 1806–19. https://doi.org/10.1016/j.freeradbiomed.2012.02.029.
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    • Foster, Matthew W., Zhonghui Yang, David M. Gooden, J Will Thompson, Carol H. Ball, Meredith E. Turner, Yongyong Hou, Jingbo Pi, M Arthur Moseley, and Loretta G. Que. “Proteomic characterization of the cellular response to nitrosative stress mediated by s-nitrosoglutathione reductase inhibition.” J Proteome Res 11, no. 4 (April 6, 2012): 2480–91. https://doi.org/10.1021/pr201180m.
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    • Yang, Wei, J Will Thompson, Zhengfeng Wang, Liangli Wang, Huaxin Sheng, Matthew W. Foster, M Arthur Moseley, and Wulf Paschen. “Analysis of oxygen/glucose-deprivation-induced changes in SUMO3 conjugation using SILAC-based quantitative proteomics.” J Proteome Res 11, no. 2 (February 3, 2012): 1108–17. https://doi.org/10.1021/pr200834f.
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    • Zennadi, Rahima, Erin J. Whalen, Erik J. Soderblom, Susan C. Alexander, J Will Thompson, Laura G. Dubois, M Arthur Moseley, and Marilyn J. Telen. “Erythrocyte plasma membrane-bound ERK1/2 activation promotes ICAM-4-mediated sickle red cell adhesion to endothelium.” Blood 119, no. 5 (February 2, 2012): 1217–27. https://doi.org/10.1182/blood-2011-03-344440.
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    • Okada, Hirokazu, Akiyoshi Uezu, Erik J. Soderblom, M Arthur Moseley, Frank B. Gertler, and Scott H. Soderling. “Peptide array X-linking (PAX): a new peptide-protein identification approach.” Plos One 7, no. 5 (2012): e37035. https://doi.org/10.1371/journal.pone.0037035.
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    • Saka, Hector A., J Will Thompson, Yi-Shan Chen, Yadunanda Kumar, Laura G. Dubois, M Arthur Moseley, and Raphael H. Valdivia. “Quantitative proteomics reveals metabolic and pathogenic properties of Chlamydia trachomatis developmental forms.” Mol Microbiol 82, no. 5 (December 2011): 1185–1203. https://doi.org/10.1111/j.1365-2958.2011.07877.x.
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    • Okada, Hirokazu, Akiyoshi Uezu, Frank M. Mason, Erik J. Soderblom, M Arthur Moseley, and Scott H. Soderling. “SH3 domain-based phototrapping in living cells reveals Rho family GAP signaling complexes.” Sci Signal 4, no. 201 (November 29, 2011): rs13. https://doi.org/10.1126/scisignal.2002189.
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    • Melvin, Jeffrey A., Christine F. Murphy, Laura G. Dubois, J Will Thompson, M Arthur Moseley, and Dewey G. McCafferty. “Staphylococcus aureus sortase A contributes to the Trojan horse mechanism of immune defense evasion with its intrinsic resistance to Cys184 oxidation.” Biochemistry 50, no. 35 (September 6, 2011): 7591–99. https://doi.org/10.1021/bi200844h.
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    • Andersen, Joshua L., J Will Thompson, Kelly R. Lindblom, Erika S. Johnson, Chih-Sheng Yang, Lauren R. Lilley, Christopher D. Freel, M Arthur Moseley, and Sally Kornbluth. “A biotin switch-based proteomics approach identifies 14-3-3ζ as a target of Sirt1 in the metabolic regulation of caspase-2.” Mol Cell 43, no. 5 (September 2, 2011): 834–42. https://doi.org/10.1016/j.molcel.2011.07.028.
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    • Patel, Keyur, Joseph E. Lucas, J Will Thompson, Laura G. Dubois, Hans L. Tillmann, Alexander J. Thompson, Diane Uzarski, et al. “High predictive accuracy of an unbiased proteomic profile for sustained virologic response in chronic hepatitis C patients.” Hepatology 53, no. 6 (June 2011): 1809–18. https://doi.org/10.1002/hep.24284.
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    • Soderblom, Erik J., Melanie Philipp, J Will Thompson, Marc G. Caron, and M Arthur Moseley. “Quantitative label-free phosphoproteomics strategy for multifaceted experimental designs.” Anal Chem 83, no. 10 (May 15, 2011): 3758–64. https://doi.org/10.1021/ac200213b.
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    • Andersen, Joshua L., J Will Thompson, Marisa R. Buchakjian, M Arthur Moseley, and Sally Kornbluth. “Abstract 4697: Metabolic regulation of caspase-2.” Cellular and Molecular Biology, April 15, 2011. https://doi.org/10.1158/1538-7445.am2011-4697.
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    • Reidel, Boris, J Will Thompson, Sina Farsiu, M Arthur Moseley, Nikolai P. Skiba, and Vadim Y. Arshavsky. “Proteomic profiling of a layered tissue reveals unique glycolytic specializations of photoreceptor cells.” Mol Cell Proteomics 10, no. 3 (March 2011): M110.002469. https://doi.org/10.1074/mcp.M110.002469.
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    • Forrester, Michael T., Douglas T. Hess, J Will Thompson, Rainbo Hultman, M Arthur Moseley, Jonathan S. Stamler, and Patrick J. Casey. “Site-specific analysis of protein S-acylation by resin-assisted capture.” J Lipid Res 52, no. 2 (February 2011): 393–98. https://doi.org/10.1194/jlr.D011106.
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    • Roulhac, Petra L., James M. Ward, J Will Thompson, Erik J. Soderblom, Michael Silva, M Arthur Moseley, and Erich D. Jarvis. “Microproteomics: quantitative proteomic profiling of small numbers of laser-captured cells.” Cold Spring Harb Protoc 2011, no. 2 (February 1, 2011): pdb.prot5573. https://doi.org/10.1101/pdb.prot5573.
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    • Cyr, Derek D., Joseph E. Lucas, J Will Thompson, Keyur Patel, Paul J. Clark, Alexander Thompson, Hans L. Tillmann, John G. McHutchison, M Arthur Moseley, and Jeanette J. McCarthy. “Characterization of serum proteins associated with IL28B genotype among patients with chronic hepatitis C.” Plos One 6, no. 7 (2011): e21854. https://doi.org/10.1371/journal.pone.0021854.
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    • Kozubowski, Lukasz, J Will Thompson, Maria E. Cardenas, M Arthur Moseley, and Joseph Heitman. “Association of calcineurin with the COPI protein Sec28 and the COPII protein Sec13 revealed by quantitative proteomics.” Plos One 6, no. 10 (2011): e25280. https://doi.org/10.1371/journal.pone.0025280.
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    • Lee, Anthony, Dena L. Toffaletti, Jennifer Tenor, Erik J. Soderblom, J Will Thompson, M Arthur Moseley, Michael Price, and John R. Perfect. “Survival defects of Cryptococcus neoformans mutants exposed to human cerebrospinal fluid result in attenuated virulence in an experimental model of meningitis.” Infect Immun 78, no. 10 (October 2010): 4213–25. https://doi.org/10.1128/IAI.00551-10.
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    • Benhar, Moran, J Will Thompson, M Arthur Moseley, and Jonathan S. Stamler. “Identification of S-nitrosylated targets of thioredoxin using a quantitative proteomic approach.” Biochemistry 49, no. 32 (August 17, 2010): 6963–69. https://doi.org/10.1021/bi100619k.
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    • Morris, Daniel P., Eric D. Roush, J Will Thompson, M Arthur Moseley, James W. Murphy, and Jonathan L. McMurry. “Kinetic characterization of Salmonella FliK-FlhB interactions demonstrates complexity of the Type III secretion substrate-specificity switch.” Biochemistry 49, no. 30 (August 3, 2010): 6386–93. https://doi.org/10.1021/bi100487p.
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    • West, Graham M., J Will Thompson, Erik J. Soderblom, Laura G. Dubois, Patrick D. Dearmond, M Arthur Moseley, and Michael C. Fitzgerald. “Mass spectrometry-based thermal shift assay for protein-ligand binding analysis.” Anal Chem 82, no. 13 (July 1, 2010): 5573–81. https://doi.org/10.1021/ac100465a.
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    • Xia, Wenle, Sarah Bacus, Intisar Husain, Leihua Liu, Sumin Zhao, Zuguo Liu, M Arthur Moseley, et al. “Resistance to ErbB2 tyrosine kinase inhibitors in breast cancer is mediated by calcium-dependent activation of RelA.” Mol Cancer Ther 9, no. 2 (February 2010): 292–99. https://doi.org/10.1158/1535-7163.MCT-09-1041.
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    • Andersen, Joshua L., Carrie E. Johnson, Christopher D. Freel, Amanda B. Parrish, Jennifer L. Day, Marisa R. Buchakjian, Leta K. Nutt, J Will Thompson, M Arthur Moseley, and Sally Kornbluth. “Restraint of apoptosis during mitosis through interdomain phosphorylation of caspase-2.” Embo J 28, no. 20 (October 21, 2009): 3216–27. https://doi.org/10.1038/emboj.2009.253.
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    • Forrester, Michael T., J Will Thompson, Matthew W. Foster, Leonardo Nogueira, M Arthur Moseley, and Jonathan S. Stamler. “Proteomic analysis of S-nitrosylation and denitrosylation by resin-assisted capture.” Nat Biotechnol 27, no. 6 (June 2009): 557–59. https://doi.org/10.1038/nbt.1545.
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    • Li, J., A. Martin, A. D. Cox, E. R. Moxon, J. C. Richards, and P. Thibault. “Mapping bacterial glycolipid complexity using capillary electrophoresis and electrospray mass spectrometry.” Methods Enzymol 405 (2005): 369–97. https://doi.org/10.1016/S0076-6879(05)05013-5.
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    • Bodnar, Wanda M., R Kevin Blackburn, Jo M. Krise, and M Arthur Moseley. “Exploiting the complementary nature of LC/MALDI/MS/MS and LC/ESI/MS/MS for increased proteome coverage.” J Am Soc Mass Spectrom 14, no. 9 (September 2003): 971–79. https://doi.org/10.1016/S1044-0305(03)00209-5.
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    • Bodnar, W. M., D. J. Bell, R. K. Blackburn, R. G. Davis, H. R. Flynn, R. M. Forrest, J. M. Krise, et al. “Evaluation of automated in-gel digestion coupled with MALDI/MS and MALDI/MS/MS for protein identification.” Proceedings 50th Asms Conference on Mass Spectrometry and Allied Topics, December 1, 2002, 171–72.
    • Schlatzer, D., J. Armstrong, K. Blackburn, W. Burkhart, R. Davis, A. Iving, J. Jing, et al. “LC/LC/MS/MS analysis of a complex proteome and protein classification by gene onology.” Proceedings 50th Asms Conference on Mass Spectrometry and Allied Topics, December 1, 2002, 189–90.
    • Vissers, Johannes P. C., R Kevin Blackburn, and M Arthur Moseley. “A novel interface for variable flow nanoscale LC/MS/MS for improved proteome coverage.” J Am Soc Mass Spectrom 13, no. 7 (July 2002): 760–71. https://doi.org/10.1016/S1044-0305(02)00418-X.
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    • Ostrowski, Lawrence E., Kevin Blackburn, Kristen M. Radde, Mary B. Moyer, Daniela M. Schlatzer, Arthur Moseley, and Richard C. Boucher. “A proteomic analysis of human cilia: identification of novel components.” Mol Cell Proteomics 1, no. 6 (June 2002): 451–65. https://doi.org/10.1074/mcp.m200037-mcp200.
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    • Koc, E. C., W. Burkhart, K. Blackburn, M. B. Moyer, D. M. Schlatzer, A. Moseley, and L. L. Spremulli. “The large subunit of the mammalian mitochondrial ribosome. Analysis of the complement of ribosomal proteins present.” J Biol Chem 276, no. 47 (November 23, 2001): 43958–69. https://doi.org/10.1074/jbc.M106510200.
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    • Moseley, M. A. “Current trends in differential expression proteomics: isotopically coded tags.” Trends Biotechnol 19, no. 10 Suppl (October 2001): S10–16. https://doi.org/10.1016/S0167-7799(01)01793-0.
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    • Tolley, L., J. W. Jorgenson, and M. A. Moseley. “Very high pressure gradient LC/MS/MS.” Anal Chem 73, no. 13 (July 1, 2001): 2985–91. https://doi.org/10.1021/ac0010835.
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    • Cavdar Koc, E., W. Burkhart, K. Blackburn, A. Moseley, and L. L. Spremulli. “The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present.” J Biol Chem 276, no. 22 (June 1, 2001): 19363–74. https://doi.org/10.1074/jbc.M100727200.
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    • Cavdar Koc, E., A. Ranasinghe, W. Burkhart, K. Blackburn, H. Koc, A. Moseley, and L. L. Spremulli. “A new face on apoptosis: death-associated protein 3 and PDCD9 are mitochondrial ribosomal proteins.” Febs Lett 492, no. 1–2 (March 9, 2001): 166–70. https://doi.org/10.1016/s0014-5793(01)02250-5.
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    • Koc, E. C., W. Burkhart, K. Blackburn, H. Koc, A. Moseley, and L. L. Spremulli. “Identification of four proteins from the small subunit of the mammalian mitochondrial ribosome using a proteomics approach.” Protein Sci 10, no. 3 (March 2001): 471–81. https://doi.org/10.1110/ps.35301.
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    • Smith, J. J., E. K. Evans, M. Murakami, M. B. Moyer, M. A. Moseley, G. Vande Woude, and S. Kornbluth. “Wee1-regulated apoptosis mediated by the crk adaptor protein in Xenopus egg extracts.” J Cell Biol 151, no. 7 (December 25, 2000): 1391–1400. https://doi.org/10.1083/jcb.151.7.1391.
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    • Koc, E. C., W. Burkhart, K. Blackburn, A. Moseley, H. Koc, and L. L. Spremulli. “A proteomics approach to the identification of mammalian mitochondrial small subunit ribosomal proteins.” J Biol Chem 275, no. 42 (October 20, 2000): 32585–91. https://doi.org/10.1074/jbc.M003596200.
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    • Li, J., P. Thibault, A. Martin, J. C. Richards, W. W. Wakarchuk, and W. van der Wilp. “Development of an on-line preconcentration method for the analysis of pathogenic lipopolysaccharides using capillary electrophoresis-electrospray mass spectrometry. Application to small colony isolates.” J Chromatogr A 817, no. 1–2 (August 21, 1998): 325–36. https://doi.org/10.1016/s0021-9673(98)00341-0.
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    • Opiteck, G. J., S. M. Ramirez, J. W. Jorgenson, and M. A. Moseley. “Comprehensive two-dimensional high-performance liquid chromatography for the isolation of overexpressed proteins and proteome mapping.” Anal Biochem 258, no. 2 (May 1, 1998): 349–61. https://doi.org/10.1006/abio.1998.2588.
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    • Opiteck, G. J., J. W. Jorgenson, M. A. Moseley, and R. J. Anderegg. “Two-Dimensional Microcolumn HPLC Coupled to a Single-Quadrupole Mass Spectrometer for the Elucidation of Sequence Tags and Peptide Mapping.” Journal of Microcolumn Separations 10, no. 4 (January 1, 1998): 365–75. https://doi.org/10.1002/(SICI)1520-667X(1998)10:4<365::AID-MCS6>3.0.CO;2-E.
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    • Chen, C., D. Jeffery, J. W. Jorgenson, M. A. Moseley, and G. M. Pollack. “Sensitive analysis of [D-Pen2,5]enkephalin in rat serum by capillary electrophoresis and laser-induced fluorescence detection.” J Chromatogr B Biomed Sci Appl 697, no. 1–2 (September 12, 1997): 149–62. https://doi.org/10.1016/s0378-4347(97)00062-5.
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    • MacNair, J. E., G. J. Opiteck, J. W. Jorgenson, and M. A. M. III. “Research methods and applications rapid separation and characterization of protein and peptide mixtures using 1.5 μm diameter non-porous silica in packed capillary liquid chromatography/mass spectrometry.” Rapid Communications in Mass Spectrometry 11, no. 12 (1997): 1279–85. https://doi.org/10.1002/(SICI)1097-0231(199708)11:12<1279::AID-RCM18>3.0.CO;2-S.
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    • MacNair, J. E., G. J. Opiteck, J. W. Jorgenson, and M. A. Moseley. “Rapid separation and characterization of protein and peptide mixtures using 1.5 microns diameter non-porous silica in packed capillary liquid chromatography/mass spectrometry.” Rapid Commun Mass Spectrom 11, no. 12 (1997): 1279–85. https://doi.org/10.1002/(SICI)1097-0231(199708)11:12<1279::AID-RCM18>3.0.CO;2-S.
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    • Gan, L. S., M. A. Moseley, B. Khosla, P. F. Augustijns, T. P. Bradshaw, R. W. Hendren, and D. R. Thakker. “CYP3A-like cytochrome P450-mediated metabolism and polarized efflux of cyclosporin A in Caco-2 cells.” Drug Metab Dispos 24, no. 3 (March 1996): 344–49.
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    • Tomer, K. B., M. A. Moseley, L. J. Deterding, and C. E. Parker. “Capillary liquid chromatography/ mass spectrometry.” Mass Spectrometry Reviews 13, no. 5–6 (1994): 431–57.
    • Moseley, M. A., J. W. Jorgenson, J. Shabanowitz, D. F. Hunt, and K. B. Tomer. “Optimization of capillary zone electrophoresis/electrospray ionization parameters for the mass spectrometry and tandem mass spectrometry analysis of peptides.” Journal of the American Society for Mass Spectrometry 3, no. 4 (January 1, 1992): 289–300. https://doi.org/10.1016/1044-0305(92)87056-5.
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    • Moseley, M. A., and S. E. Unger. “Packed capillary liquid chromatography/electrospray ionization/mass spectrometry in the pharmaceutical sciences: Characterization of protein mixtures.” Journal of Microcolumn Separations 4, no. 5 (January 1, 1992): 393–98. https://doi.org/10.1002/mcs.1220040505.
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    • Deterding, L. J., C. E. Parker, J. R. Perkins, M. Arthur Moseley, J. W. Jorgenson, and K. B. Tomer. “Nanoscale separations. Capillary liquid chromatography-mass spectrometry and capillary zone electrophoresis-mass spectrometry for the determination of peptides and proteins.” Journal of Chromatography A 554, no. 1–2 (August 21, 1991): 329–38. https://doi.org/10.1016/S0021-9673(01)88460-0.
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    • Deterding, L. J., M. A. Moseley, K. B. Tomer, and J. W. Jorgenson. “Nanoscale separations combined with tandem mass spectrometry.” J Chromatogr 554, no. 1–2 (August 21, 1991): 73–82. https://doi.org/10.1016/s0021-9673(01)88438-7.
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    • Moseley, M. A., L. J. Deterding, K. B. Tomer, and J. W. Jorgenson. “Nanoscale packed-capillary liquid chromatography coupled with mass spectrometry using a coaxial continuous-flow fast atom bombardment interface.” Anal Chem 63, no. 14 (July 15, 1991): 1467–73. https://doi.org/10.1021/ac00014a023.
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    • Moseley, M. A., L. J. Deterding, K. B. Tomer, and J. W. Jorgenson. “Determination of bioactive peptides using capillary zone electrophoresis/mass spectrometry.” Anal Chem 63, no. 2 (January 15, 1991): 109–14. https://doi.org/10.1021/ac00002a005.
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    • Moseley, M. A., L. J. Deterding, K. B. Tomer, and J. W. Jorgenson. “Capillary zone electrophoresis-mass spectrometry using a coaxial continuous-flow fast atom bombardment interface.” J Chromatogr 516, no. 1 (September 7, 1990): 167–73. https://doi.org/10.1016/s0021-9673(01)90214-6.
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    • Pleasance, S., P. Thibault, M. A. Moseley, L. J. Deterding, K. B. Tomer, and J. W. Jorgenson. “Continuous flow fast atom bombardment with packed microcolumns: A comparison of precolumn versus coaxial matrix delivery.” Journal of the American Society for Mass Spectrometry 1, no. 4 (January 1, 1990): 312–19. https://doi.org/10.1016/1044-0305(90)85007-9.
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    • Deterding, L. J., M. A. Moseley, K. B. Tomer, and J. W. Jorgenson. “Coaxial continuous flow fast atom bombardment in conjunction with tandem mass spectrometry for the analysis of biomolecules.” Anal Chem 61, no. 22 (November 15, 1989): 2504–11. https://doi.org/10.1021/ac00197a011.
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    • Moseley, M. A., L. J. Deterding, K. B. Tomer, and J. W. Jorgenson. “Coupling of capillary zone electrophoresis and capillary liquid chromatography with coaxial continuous-flow fast atom bombardment tandem sector mass spectrometry.” J Chromatogr 480 (October 20, 1989): 197–209. https://doi.org/10.1016/s0021-9673(01)84289-8.
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    • Moseley, M. A., L. J. Deterding, K. B. Tomer, and J. W. Jorgenson. “Capillary-zone electrophoresis/fast-atom bombardment mass spectrometry: design of an on-line coaxial continuous-flow interface.” Rapid Commun Mass Spectrom 3, no. 3 (March 1989): 87–93. https://doi.org/10.1002/rcm.1290030310.
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    • Moseley, M. A., L. J. Deterding, J. S. M. de Wit, K. B. Tomer, R. T. Kennedy, N. Bragg, and J. W. Jorgenson. “Optimization of a Coaxial Continuous Flow Fast Atom Bombardment Interface between Capillary Liquid Chromatography and Magnetic Sector Mass Spectrometry for the Analysis of Biomolecules.” Analytical Chemistry 61, no. 14 (January 1, 1989): 1577–84. https://doi.org/10.1021/ac00189a021.
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    • Raymer, J. H., M. A. Moseley, E. D. Pellizzari, and G. R. Velez. “Capillary supercritical fluid chromatography coupled with matrix isolation fourier transform infrared spectroscopy (SFC‐MI‐FTIR).” Journal of High Resolution Chromatography 11, no. 2 (January 1, 1988): 209–11. https://doi.org/10.1002/jhrc.1240110215.
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    • Wit, J. S. M. de, L. J. Deterding, M. A. Moseley, K. B. Tomer, J. W. Jorgenson, and R. M. Caprioli. “Design of a coaxial continuous flow fast atom bombardment probe.” Rapid Communications in Mass Spectrometry 2, no. 5 (January 1, 1988): 100–104. https://doi.org/10.1002/rcm.1290020510.
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    • Pellizzari, E. D., M. A. Moseley, and S. D. Cooper. “Recent advances in the analysis of polychlorinated biphenyls in environmental and biological media.” J Chromatogr 334, no. 3 (November 15, 1985): 277–314. https://doi.org/10.1016/s0021-9673(00)80273-3.
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    • Cooper, S. D., M. A. Moseley, and E. D. Pellizzari. “Surrogate Standards for the Determination of Individual Polychlorinated Biphenyls Using High-Resolution Gas Chromatography with Electron Capture Detection.” Analytical Chemistry 57, no. 13 (January 1, 1985): 2469–73. https://doi.org/10.1021/ac00290a010.
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    • Gurka, D. F., M. Umana, E. D. Pellizzari, A. Moseley, and J. A. de Haseth. “MEASUREMENT OF ON-THE-FLY FOURIER TRANSFORM INFRARED REFERENCE SPECTRA OF ENVIRONMENTALLY IMPORTANT COMPOUNDS.” Applied Spectroscopy 39, no. 2 (January 1, 1985): 297–303. https://doi.org/10.1366/0003702854248791.
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    • Pellizzari, E. D., M. A. Moseley, and S. D. Cooper. “Recent advances in the analysis of polychlorinated biphenyls in environmental and biological media.” Journal of Chromatography 334, no. 3 (1985): 277–314.
    • Moseley, M. A., E. D. Pellizzari, and L. R. Williams. “EVALUATION OF SIMCA PATTERN RECOGNITION FOR USE WITH POLYCHLORINATED BIPHENYL DATA SETS.” National Meeting  American Chemical Society, Division of Environmental Chemistry 24, no. 2 (December 1, 1984): 63–64.
    • Hines, J. W., M. D. Erickson, D. L. Newton, M. A. Moseley, L. M. Retzlaff, and E. D. Pellizzari. “Simple fabrication of a “Grob” injector.” Journal of High Resolution Chromatography 5, no. 1 (January 1, 1982): 52–53. https://doi.org/10.1002/jhrc.1240050111.
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    • MOSELEY, M. A., and E. D. PELLIZZARI. “POLYSILOXANE DEACTIVATED FUSED SILICA CAPILLARIES CONTAINING IMMOBILIZED STATIONARY PHASES.” Hrc & Cc J High Resolut Chromatogr Chromatogr Commun V 5, no. N 9 (1982): 472–75.
    • Moseley, M. A., and E. D. Pellizzari. “Polysiloxane deactivated fused silica capillaries containing immobilized stationary phases.” Journal of High Resolution Chromatography 5, no. 9 (January 1, 1982): 472–75. https://doi.org/10.1002/jhrc.1240050904.
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    • Moseley, M. A., and E. D. Pellizzari. “Development and evaluation of wall coated open‐tubular columns for GC analysis of individual polychlorinated biphenyl isomers.” Journal of High Resolution Chromatography 5, no. 8 (January 1, 1982): 404–12. https://doi.org/10.1002/jhrc.1240050803.
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    • Wertz, D. W., and M. A. Moseley. “Vibrational Study of the Metal-Olefin Bond in 1, 5-Cyclooctadiene Complexes of Rhodium(I), Palladium(II), and Platinum(II).” Inorganic Chemistry 19, no. 3 (January 1, 1980): 705–8. https://doi.org/10.1021/ic50205a025.
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    • Wertz, D. W., and M. A. Moseley. “A vibrational study of the metal-olefin bond in norbornadiene complexes of Rh(I), Pd(II) and Pt(II).” Spectrochimica Acta Part A: Molecular Spectroscopy 36, no. 5 (January 1, 1980): 467–72. https://doi.org/10.1016/0584-8539(80)80164-4.
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  • Book Sections

    • Millington, D. S., H. Zhang, M. Arthur Moseley, J. Will Thompson, and P. Smith. “Direct Solvent Extraction and Analysis of Biomarkers in Dried Blood Spots Using a Flow-Through Autosampler.” In Dried Blood Spots: Applications and Techniques, 9781118054697:314–24, 2014. https://doi.org/10.1002/9781118890837.ch24.
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    • Moseley, M. A. “Quantitative Proteomics in Genomic Medicine.” In Genomic and Personalized Medicine, 1:155–65, 2013. https://doi.org/10.1016/B978-0-12-382227-7.00013-6.
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  • Conference Papers

    • Todd, J. L., V. Venkat, R. Henao, C. Brinkley, F. L. Kelly, C. W. Frankel, A. Frear, et al. “Bronchoalveolar Lavage Fluid Proteome in Chronic Lung Allograft Dysfunction.” In Journal of Heart and Lung Transplantation, 37:S204–S204. ELSEVIER SCIENCE INC, 2018.
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    • Kraus, V. B., J. Catterall, E. Soderblom, M. A. Moseley, and S. Suchindran. “Development of a serum biomarker panel highly predictive of knee osteoarthritis progression.” In Osteoarthritis and Cartilage, 24:S20–S20. Elsevier BV, 2016. https://doi.org/10.1016/j.joca.2016.01.065.
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    • Kraus, V. B., J. Catterall, E. Soderblom, M. A. Moseley, and S. Suchindran. “Development of a serum biomarker panel highly predictive of a knee osteoarthritis diagnosis.” In Osteoarthritis and Cartilage, 24:S72–S72. Elsevier BV, 2016. https://doi.org/10.1016/j.joca.2016.01.156.
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    • Foster, M. W., J. W. Thompson, D. M. Brass, M. A. Moseley, D. L. Morgan, and S. M. Palmer. “Plasma Metabolomics Analysis Identifies Candidate Biomarkers Of Flavoring-Induced Bronchiolitis Obliterans.” In American Journal of Respiratory and Critical Care Medicine, Vol. 193. AMER THORACIC SOC, 2016.
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    • Foster, M. W., W. M. Gwinn, F. L. Kelly, D. M. Brass, J. W. Thompson, M. A. Moseley, D. L. Morgan, and S. M. Palmer. “Proteomic Analysis Reveals Significant Epithelial Remodeling After In Vitro Exposure To Diacetyl Vapor.” In American Journal of Respiratory and Critical Care Medicine, Vol. 193. AMER THORACIC SOC, 2016.
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    • Kazi, Zoheb, Katie Berrier, Cheng Lu, Deeksha Bali, J. Will Thompson, M. Arthur Moseley, and Priya Kishnani. “Proteomics to identify signature proteins in patients likely to mount an immune response to enzyme replacement therapy in infantile Pompe disease.” In Molecular Genetics and Metabolism, 114:S61–S61. Elsevier BV, 2015. https://doi.org/10.1016/j.ymgme.2014.12.128.
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    • Quinones, Quintin J., Qing Ma, Zhiquan Zhang, Ricardo Henao, Erik Soderblom, Martin A. Moseley, Christopher Newgard, Kelly Drew, Brian M. Barnes, and Mihai V. Podgoreanu. “Proteomic Profiling Reveals Reduction in Electron Transport Chain Proteins in the Hearts of Hibernating Arctic Ground Squirrels Compared with Rats after Surgical Ischemia and Reperfusion: A Convergence of Mammalian Cardio-protective Strategies.” In Circulation, Vol. 130. LIPPINCOTT WILLIAMS & WILKINS, 2014.
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    • Figueiredo-Freitas, Cicero, Michael W. Foster, Leonardo Nogueira, Jingsheng Liang, Aline Yamashita, Raul Dulce, J Will Thompson, et al. “S-Nitrosylation Decreases Ca2+ Sensitivity and Actomyosin ATPase Activity of Contractile Proteins in Cardiac Myofibrils.” In Biophysical Journal, 104:451a-451a. Elsevier BV, 2013. https://doi.org/10.1016/j.bpj.2012.11.2498.
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    • Naggie, Susanna, Anu Osinusi, Tiffany Himmel, Joseph Lucas, J. W. Thompson, Laura G. Dubois, Martin A. Moseley, Paul J. Clark, Shyam Kottilil, and Keyur Patel. “Targeted proteomics signature identifies corticosteroid binding globulin peptides as highly predictive of treatment response in IL28B unfavorable genotype patients.” In Hepatology, 56:999A-1000A. WILEY-BLACKWELL, 2012.
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    • Foster, Matthew, J Will Thompson, Michael Forrester, Yonggang Sha, Dawn Bowles, M Arthur Moseley, and Harvey Marshall. “Quantitative proteomics of the cytokine-modulated NOS2 interactome in airway epithelial cells.” In Nitric Oxide, 27:S13–S13. Elsevier BV, 2012. https://doi.org/10.1016/j.niox.2012.04.047.
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    • Philipp, M., E. J. Soderblom, J. W. Thompson, M. G. Caron, and M. A. Moseley. “A Label-free Quantitative Phosphoproteomic Platform To Assess The Phosphorylation State Of A Complex Sample.” In Naunyn Schmiedebergs Archives of Pharmacology, 383:69–69. SPRINGER, 2011.
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    • Foster, M. W., E. N. Potts, E. J. Soderblom, Z. Yang, D. M. Gooden, M. A. Moseley, W. M. Foster, and L. G. Que. “Systemic And/Or Local Aerosol Inhibition Of S-Nitrosoglutathione Reductase (GSNOR) Ameliorates Physiologic, Biologic, And Proteomic Phenotypes In An Allergic Mouse Model Of Inflammatory Airway Disease.” In American Journal of Respiratory and Critical Care Medicine, Vol. 183. AMER THORACIC SOC, 2011.
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    • Foster, M. W., Z. Yang, J. W. Thompson, C. H. Ball, M. Turner, M. A. Moseley, and L. G. Que. “A Proteomic Investigation Of GSNOR-Regulated Pathways In Cytokine-Stimulated Mouse Alveolar Macrophages.” In American Journal of Respiratory and Critical Care Medicine, Vol. 183. AMER THORACIC SOC, 2011.
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    • Piacentino III, P., J. W. Thompson, E. J. Soderblom, M. Foster, V. A. Burns, J. G. Rogers, C. A. Milano, M. A. Moseley, and D. E. Bowles. “Ischemic Human Heart Failure is Associated With Decreased Phosphorylation of Pyruvate Dehydrogenase and Triosephosphate Isomerase: Proteomic Evidence Supporting Carbohydrate Utilization Preference in the End-Stage Failing Ischemic Heart.” In Circulation, Vol. 122, 2010.
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    • Tutaeva, Victoria, J Will Thompson, Matthew W. Foster, M Arthur Moseley, Stephen P. Holly, Martha Delahunty, Leslie V. Parise, and Marilyn J. Telen. “S-Nitrosylation of Rap1and Relationship to Rap1 Activity and Disease Status In SCD.” In Blood, 116:1098–1098. AMER SOC HEMATOLOGY, 2010.
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    • Patel, Keyur, Joseph Lucas, J. W. Thompson, Martin A. Moseley, Diane M. Uzarski, Hans L. Tillmann, Robert M. Califf, Jeanette McCarthy, and John G. McHutchison. “HIGH PREDICTIVE ACCURACY OF AN UNBIASED PROTEOMIC PROFILE TO PREDICT SUSTAINED VIROLOGIC RESPONSE IN GENOTYPE 1 CHRONIC HEPATITIS C PATIENTS.” In Hepatology, 48:403A-403A. JOHN WILEY & SONS INC, 2008.
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